RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 TRAV7A0A075B6U4 112 aa4.55□□□□□ -1.68
TGFBR3-202ENST00000370399 SMIM26A0A096LP01 95 aa4.54□□□□□ -1.68
TGFBR3-202ENST00000370399 CNBPP62633 177 aaKnown RBP4.54□□□□□ -1.68
TGFBR3-202ENST00000370399 IGHV6-1A0A0B4J1U7 121 aa4.53□□□□□ -1.68
TGFBR3-202ENST00000370399 BCE1O60756 84 aa4.53□□□□□ -1.68
TGFBR3-202ENST00000370399 RPL37AP61513 92 aaKnown RBP4.53□□□□□ -1.68
TGFBR3-202ENST00000370399 TNP2Q05952 138 aa4.53□□□□□ -1.68
TGFBR3-202ENST00000370399 TRBV7-4A0A0J9YYF1 115 aa4.53□□□□□ -1.68
TGFBR3-202ENST00000370399 CXCL6P80162 114 aa4.53□□□□□ -1.68
TGFBR3-202ENST00000370399 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.53□□□□□ -1.68
TGFBR3-202ENST00000370399 A6NED7 52 aa4.52□□□□□ -1.69
TGFBR3-202ENST00000370399 SMIM29Q86T20 159 aa4.52□□□□□ -1.69
TGFBR3-202ENST00000370399 PLA2G2DQ9UNK4 145 aa4.52□□□□□ -1.69
TGFBR3-202ENST00000370399 SERP1Q9Y6X1 66 aa4.51□□□□□ -1.69
TGFBR3-202ENST00000370399 IGFL1Q6UW32 110 aa4.51□□□□□ -1.69
TGFBR3-202ENST00000370399 LINC00208Q96KT6 92 aa4.51□□□□□ -1.69
TGFBR3-202ENST00000370399 PSORS1C2Q9UIG4 136 aa4.5□□□□□ -1.69
TGFBR3-202ENST00000370399 A0A1W2PNM2 257 aa4.5□□□□□ -1.69
TGFBR3-202ENST00000370399 C1orf195Q5TG92 126 aa4.5□□□□□ -1.69
TGFBR3-202ENST00000370399 OBSCN-AS1Q96MR7 158 aa4.49□□□□□ -1.69
TGFBR3-202ENST00000370399 LINC01600Q96MT4 127 aa4.49□□□□□ -1.69
TGFBR3-202ENST00000370399 HCG22E2RYF7 251 aa4.49□□□□□ -1.69
TGFBR3-202ENST00000370399 K7EQZ3 153 aa4.49□□□□□ -1.69
TGFBR3-202ENST00000370399 TMEM254Q8TBM7 123 aa4.49□□□□□ -1.69
TGFBR3-202ENST00000370399 RETNLBQ9BQ08 111 aa4.49□□□□□ -1.69
TGFBR3-202ENST00000370399 SMR3BP02814 79 aaPredicted RBP4.48□□□□□ -1.69
TGFBR3-202ENST00000370399 PRR15LQ9BU68 103 aa4.48□□□□□ -1.69
TGFBR3-202ENST00000370399 IGLV5-37A0A075B6J1 123 aa4.47□□□□□ -1.69
TGFBR3-202ENST00000370399 PANO1I0J062 215 aa4.47□□□□□ -1.69
TGFBR3-202ENST00000370399 SPACA4Q8TDM5 124 aa4.47□□□□□ -1.69
TGFBR3-202ENST00000370399 K7ERS5 55 aa4.46□□□□□ -1.69
TGFBR3-202ENST00000370399 ZNF861PO60384 105 aa4.46□□□□□ -1.69
TGFBR3-202ENST00000370399 PCOTHQ58A44 107 aa4.46□□□□□ -1.7
TGFBR3-202ENST00000370399 IGLV5-48A0A075B6I7 105 aa4.45□□□□□ -1.7
TGFBR3-202ENST00000370399 PMAIP1Q13794 54 aa4.45□□□□□ -1.7
TGFBR3-202ENST00000370399 PSPHP1O15172 72 aa4.44□□□□□ -1.7
TGFBR3-202ENST00000370399 CRYGAP11844 174 aa4.44□□□□□ -1.7
TGFBR3-202ENST00000370399 SPRR1AP35321 89 aa4.44□□□□□ -1.7
TGFBR3-202ENST00000370399 DMBT1Q9UGM3 2413 aaPredicted RBP4.44□□□□□ -1.7
TGFBR3-202ENST00000370399 H0Y9P7 68 aa4.43□□□□□ -1.7
TGFBR3-202ENST00000370399 PLA2G1BP04054 148 aaKnown RBP4.43□□□□□ -1.7
TGFBR3-202ENST00000370399 A0A1B0GW54 56 aa4.43□□□□□ -1.7
TGFBR3-202ENST00000370399 SPRR4Q96PI1 79 aa4.43□□□□□ -1.7
TGFBR3-202ENST00000370399 AKAP9Q99996 3911 aa4.42□□□□□ -1.7
TGFBR3-202ENST00000370399 hDV103S1A0JD37 113 aa4.42□□□□□ -1.7
TGFBR3-202ENST00000370399 IGLV7-43P04211 117 aa4.42□□□□□ -1.7
TGFBR3-202ENST00000370399 KRTAP7-1Q8IUC3 87 aa4.42□□□□□ -1.7
TGFBR3-202ENST00000370399 TYMSOSQ8TAI1 123 aa4.41□□□□□ -1.7
TGFBR3-202ENST00000370399 KRTAP11-1Q8IUC1 163 aa4.41□□□□□ -1.7
TGFBR3-202ENST00000370399 KRTAP10-2P60368 255 aa4.4□□□□□ -1.7
TGFBR3-202ENST00000370399 C1orf64Q8NEQ6 169 aa4.39□□□□□ -1.71
TGFBR3-202ENST00000370399 A8MWP4 228 aa4.39□□□□□ -1.71
TGFBR3-202ENST00000370399 KRTAP4-16G5E9R7 235 aaPredicted RBP4.39□□□□□ -1.71
TGFBR3-202ENST00000370399 FLG2Q5D862 2391 aaPredicted RBP4.38□□□□□ -1.71
TGFBR3-202ENST00000370399 SPINK1P00995 79 aa4.38□□□□□ -1.71
TGFBR3-202ENST00000370399 PRR15Q8IV56 129 aa4.38□□□□□ -1.71
TGFBR3-202ENST00000370399 DSCR10P59022 87 aa4.37□□□□□ -1.71
TGFBR3-202ENST00000370399 Q6ZRN7 208 aaPredicted RBP4.37□□□□□ -1.71
TGFBR3-202ENST00000370399 PRO0628Q9UI54 55 aa4.37□□□□□ -1.71
TGFBR3-202ENST00000370399 RPS28P62857 69 aaKnown RBP4.37□□□□□ -1.71
TGFBR3-202ENST00000370399 Q6ZR54 194 aa4.37□□□□□ -1.71
TGFBR3-202ENST00000370399 PLAC8Q9NZF1 115 aa4.36□□□□□ -1.71
TGFBR3-202ENST00000370399 SRRM2Q9UQ35 2752 aaKnown RBP4.36□□□□□ -1.71
TGFBR3-202ENST00000370399 IGKV2D-30A0A075B6S6 120 aa4.36□□□□□ -1.71
TGFBR3-202ENST00000370399 IGKV2-30P06310 120 aa4.36□□□□□ -1.71
TGFBR3-202ENST00000370399 LIMD2Q9BT23 127 aa4.36□□□□□ -1.71
TGFBR3-202ENST00000370399 C4orf26Q17RF5 130 aa4.35□□□□□ -1.71
TGFBR3-202ENST00000370399 TRAV22A0A0B4J277 110 aa4.35□□□□□ -1.71
TGFBR3-202ENST00000370399 KRTAP10-1P60331 282 aa4.35□□□□□ -1.71
TGFBR3-202ENST00000370399 SSBP3-AS1Q7Z2R9 100 aa4.34□□□□□ -1.71
TGFBR3-202ENST00000370399 CYSTM1Q9H1C7 97 aa4.34□□□□□ -1.71
TGFBR3-202ENST00000370399 LINC00313P59037 77 aa4.34□□□□□ -1.71
TGFBR3-202ENST00000370399 FAM229AH3BQW9 127 aa4.33□□□□□ -1.72
TGFBR3-202ENST00000370399 C8orf17Q9NRJ1 99 aa4.33□□□□□ -1.72
TGFBR3-202ENST00000370399 H7BZZ5 65 aa4.33□□□□□ -1.72
TGFBR3-202ENST00000370399 A0A1B0GVX0 72 aa4.32□□□□□ -1.72
TGFBR3-202ENST00000370399 KLKP1Q107X0 134 aa4.32□□□□□ -1.72
TGFBR3-202ENST00000370399 MRPL34Q9BQ48 92 aaKnown RBP4.32□□□□□ -1.72
TGFBR3-202ENST00000370399 CSMD3Q7Z407 3707 aa4.32□□□□□ -1.72
TGFBR3-202ENST00000370399 FBN3Q75N90 2809 aa4.31□□□□□ -1.72
TGFBR3-202ENST00000370399 Q96NJ1 140 aa4.31□□□□□ -1.72
TGFBR3-202ENST00000370399 OCR1Q9BZK8 76 aa4.31□□□□□ -1.72
TGFBR3-202ENST00000370399 PRR26Q8N8Z3 221 aa4.31□□□□□ -1.72
TGFBR3-202ENST00000370399 TP53AIP1Q9HCN2 124 aa4.31□□□□□ -1.72
TGFBR3-202ENST00000370399 LINC00336Q6ZUF6 198 aa4.3□□□□□ -1.72
TGFBR3-202ENST00000370399 SPRR1BP22528 89 aa4.3□□□□□ -1.72
TGFBR3-202ENST00000370399 LINC00304Q8N9R0 145 aa4.29□□□□□ -1.72
TGFBR3-202ENST00000370399 COL7A1Q02388 2944 aa4.29□□□□□ -1.72
TGFBR3-202ENST00000370399 SPAG11AQ6PDA7 123 aa4.29□□□□□ -1.72
TGFBR3-202ENST00000370399 C9orf92A6NGG3 77 aa4.29□□□□□ -1.72
TGFBR3-202ENST00000370399 IGLV8-61A0A075B6I0 122 aa4.28□□□□□ -1.73
TGFBR3-202ENST00000370399 H3BPC8 53 aa4.27□□□□□ -1.73
TGFBR3-202ENST00000370399 LINC00472Q9H8W2 130 aa4.27□□□□□ -1.73
TGFBR3-202ENST00000370399 A0A1B0GU69 56 aa4.27□□□□□ -1.73
TGFBR3-202ENST00000370399 ACYP2P14621 99 aa4.26□□□□□ -1.73
TGFBR3-202ENST00000370399 C7orf65Q6ZTY9 151 aa4.26□□□□□ -1.73
TGFBR3-202ENST00000370399 A0A087X002 238 aa4.25□□□□□ -1.73
TGFBR3-202ENST00000370399 LCE6AA0A183 80 aa4.25□□□□□ -1.73
TGFBR3-202ENST00000370399 MEGF8Q7Z7M0 2845 aa4.24□□□□□ -1.73
TGFBR3-202ENST00000370399 MMP24-AS1A0A0U1RRL7 71 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms