RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 LINC00337Q8N6G1 96 aa4.61□□□□□ -1.67
YBX3-204ENST00000366290 DIRC1Q969H9 104 aa4.61□□□□□ -1.67
YBX3-204ENST00000366290 KRTAP4-16G5E9R7 235 aaPredicted RBP4.6□□□□□ -1.67
YBX3-204ENST00000366290 H0Y9J4 135 aa4.6□□□□□ -1.67
YBX3-204ENST00000366290 SPRR1AP35321 89 aa4.6□□□□□ -1.67
YBX3-204ENST00000366290 S100A12P80511 92 aa4.6□□□□□ -1.67
YBX3-204ENST00000366290 TMEM126AQ9H061 195 aa4.6□□□□□ -1.67
YBX3-204ENST00000366290 KCNQ1DNQ9H478 68 aa4.6□□□□□ -1.67
YBX3-204ENST00000366290 BCE1O60756 84 aa4.59□□□□□ -1.67
YBX3-204ENST00000366290 DDTP30046 118 aa4.59□□□□□ -1.67
YBX3-204ENST00000366290 HIST1H4GQ99525 98 aa4.59□□□□□ -1.67
YBX3-204ENST00000366290 PRO1933Q9H354 126 aa4.59□□□□□ -1.67
YBX3-204ENST00000366290 UQCR10Q9UDW1 63 aa4.59□□□□□ -1.67
YBX3-204ENST00000366290 ZNF861PO60384 105 aa4.58□□□□□ -1.68
YBX3-204ENST00000366290 RPL13AP40429 203 aaKnown RBP4.58□□□□□ -1.68
YBX3-204ENST00000366290 COPS9Q8WXC6 57 aa4.58□□□□□ -1.68
YBX3-204ENST00000366290 FXYD2P54710 66 aa4.57□□□□□ -1.68
YBX3-204ENST00000366290 PRLHP81277 87 aa4.57□□□□□ -1.68
YBX3-204ENST00000366290 TAL2Q16559 108 aa4.57□□□□□ -1.68
YBX3-204ENST00000366290 S100A7L2Q5SY68 101 aa4.57□□□□□ -1.68
YBX3-204ENST00000366290 C12orf57Q99622 126 aa4.57□□□□□ -1.68
YBX3-204ENST00000366290 TRAV23DV6A0A075B6W5 121 aa4.56□□□□□ -1.68
YBX3-204ENST00000366290 OR13C6PQ8NH95 151 aa4.56□□□□□ -1.68
YBX3-204ENST00000366290 RPL28P46779 137 aaKnown RBP4.55□□□□□ -1.68
YBX3-204ENST00000366290 HSD52Q0P140 79 aa4.55□□□□□ -1.68
YBX3-204ENST00000366290 FAM19A1Q7Z5A9 133 aa4.55□□□□□ -1.68
YBX3-204ENST00000366290 LPAP08519 4548 aa4.55□□□□□ -1.68
YBX3-204ENST00000366290 TRAV13-2A0A0B4J235 113 aa4.54□□□□□ -1.68
YBX3-204ENST00000366290 ZNF73O43830 326 aaPredicted RBP4.54□□□□□ -1.68
YBX3-204ENST00000366290 UBE2AP49459 152 aa4.54□□□□□ -1.68
YBX3-204ENST00000366290 SMIM11BQ8TCY0 68 aa4.54□□□□□ -1.68
YBX3-204ENST00000366290 Q9BRP9 147 aa4.54□□□□□ -1.68
YBX3-204ENST00000366290 A0A0B4J2C4 111 aa4.53□□□□□ -1.68
YBX3-204ENST00000366290 A6NDN8 102 aa4.53□□□□□ -1.68
YBX3-204ENST00000366290 C6orf99Q4VX62 202 aa4.53□□□□□ -1.68
YBX3-204ENST00000366290 Q6ZRX8 168 aa4.53□□□□□ -1.68
YBX3-204ENST00000366290 SMCR5Q8TEV8 140 aa4.53□□□□□ -1.68
YBX3-204ENST00000366290 ETDCA0A1B0GVM5 59 aa4.52□□□□□ -1.69
YBX3-204ENST00000366290 PCP4L1A6NKN8 68 aa4.52□□□□□ -1.69
YBX3-204ENST00000366290 ERC2-IT1O76042 136 aa4.52□□□□□ -1.69
YBX3-204ENST00000366290 BVES-AS1Q5T3Y7 98 aa4.52□□□□□ -1.69
YBX3-204ENST00000366290 ANAPC11Q9NYG5 84 aa4.52□□□□□ -1.69
YBX3-204ENST00000366290 TSTD3H0UI37 97 aa4.51□□□□□ -1.69
YBX3-204ENST00000366290 ELOF1P60002 83 aaKnown RBP4.51□□□□□ -1.69
YBX3-204ENST00000366290 CTAG1AP78358 180 aa4.51□□□□□ -1.69
YBX3-204ENST00000366290 HIGD2AQ9BW72 106 aa4.51□□□□□ -1.69
YBX3-204ENST00000366290 CBY1Q9Y3M2 126 aa4.51□□□□□ -1.69
YBX3-204ENST00000366290 TRBV7-6A0A0J9YX20 115 aa4.5□□□□□ -1.69
YBX3-204ENST00000366290 K7ERJ3 54 aa4.5□□□□□ -1.69
YBX3-204ENST00000366290 FAM229BQ4G0N7 80 aa4.5□□□□□ -1.69
YBX3-204ENST00000366290 NHP2Q9NX24 153 aaKnown RBP4.5□□□□□ -1.69
YBX3-204ENST00000366290 MUC2Q02817 5179 aa4.5□□□□□ -1.69
YBX3-204ENST00000366290 H7C2G1 150 aa4.49□□□□□ -1.69
YBX3-204ENST00000366290 CRYGAP11844 174 aa4.49□□□□□ -1.69
YBX3-204ENST00000366290 COX7BP24311 80 aa4.49□□□□□ -1.69
YBX3-204ENST00000366290 HINT1P49773 126 aaPredicted RBP4.49□□□□□ -1.69
YBX3-204ENST00000366290 RAB37Q96AX2 223 aa4.49□□□□□ -1.69
YBX3-204ENST00000366290 SPRR4Q96PI1 79 aa4.49□□□□□ -1.69
YBX3-204ENST00000366290 PRO1854Q9UHT4 67 aa4.49□□□□□ -1.69
YBX3-204ENST00000366290 SEC61GP60059 68 aa4.48□□□□□ -1.69
YBX3-204ENST00000366290 LINC00483Q53H64 154 aa4.47□□□□□ -1.69
YBX3-204ENST00000366290 ST20-AS1Q8NBB2 130 aa4.47□□□□□ -1.69
YBX3-204ENST00000366290 M0R143 59 aa4.46□□□□□ -1.7
YBX3-204ENST00000366290 TSPAN13O95857 204 aa4.46□□□□□ -1.7
YBX3-204ENST00000366290 KRTAP13-2Q52LG2 175 aa4.46□□□□□ -1.7
YBX3-204ENST00000366290 LINC00575Q6W349 94 aa4.46□□□□□ -1.7
YBX3-204ENST00000366290 KRTAP4-4Q9BYR3 166 aa4.45□□□□□ -1.7
YBX3-204ENST00000366290 IGLV5-48A0A075B6I7 105 aa4.44□□□□□ -1.7
YBX3-204ENST00000366290 SPRR1BP22528 89 aa4.44□□□□□ -1.7
YBX3-204ENST00000366290 KRTAP5-4Q6L8H1 288 aa4.44□□□□□ -1.7
YBX3-204ENST00000366290 C3orf22Q8N5N4 141 aa4.44□□□□□ -1.7
YBX3-204ENST00000366290 ZNF706Q9Y5V0 76 aaPredicted RBP4.44□□□□□ -1.7
YBX3-204ENST00000366290 VAMP3Q15836 100 aa4.43□□□□□ -1.7
YBX3-204ENST00000366290 hADV29S1A0JD25 119 aa4.42□□□□□ -1.7
YBX3-204ENST00000366290 H0YGX0 51 aa4.42□□□□□ -1.7
YBX3-204ENST00000366290 BATFQ16520 125 aa4.42□□□□□ -1.7
YBX3-204ENST00000366290 CLEC2BQ92478 149 aa4.42□□□□□ -1.7
YBX3-204ENST00000366290 SNHG12Q9BXW3 62 aa4.42□□□□□ -1.7
YBX3-204ENST00000366290 SLC25A20O43772 301 aa4.41□□□□□ -1.7
YBX3-204ENST00000366290 LCE3EQ5T5B0 92 aa4.41□□□□□ -1.7
YBX3-204ENST00000366290 Q6ZQY7 126 aa4.41□□□□□ -1.7
YBX3-204ENST00000366290 LINC00304Q8N9R0 145 aa4.41□□□□□ -1.7
YBX3-204ENST00000366290 NAA38Q9BRA0 125 aaKnown RBP4.41□□□□□ -1.7
YBX3-204ENST00000366290 TEX49A0A1B0GTD5 131 aa4.4□□□□□ -1.71
YBX3-204ENST00000366290 PSMB2P49721 201 aa4.4□□□□□ -1.71
YBX3-204ENST00000366290 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.4□□□□□ -1.71
YBX3-204ENST00000366290 DEFB105AQ8NG35 78 aa4.4□□□□□ -1.71
YBX3-204ENST00000366290 A0A1B0GX51 115 aa4.39□□□□□ -1.71
YBX3-204ENST00000366290 TAX1BP3O14907 124 aa4.39□□□□□ -1.71
YBX3-204ENST00000366290 MOBPQ13875 183 aa4.39□□□□□ -1.71
YBX3-204ENST00000366290 SPAG11AQ6PDA7 123 aa4.39□□□□□ -1.71
YBX3-204ENST00000366290 LST1O00453 97 aa4.38□□□□□ -1.71
YBX3-204ENST00000366290 TCL1BO95988 128 aa4.37□□□□□ -1.71
YBX3-204ENST00000366290 COX6CP09669 75 aa4.37□□□□□ -1.71
YBX3-204ENST00000366290 H3BUT2 72 aa4.36□□□□□ -1.71
YBX3-204ENST00000366290 TRACP01848 142 aa4.36□□□□□ -1.71
YBX3-204ENST00000366290 SCGB1C2P0DMR2 95 aa4.36□□□□□ -1.71
YBX3-204ENST00000366290 SSBP3-AS1Q7Z2R9 100 aa4.36□□□□□ -1.71
YBX3-204ENST00000366290 PPDPFLQ8WWR9 84 aa4.36□□□□□ -1.71
YBX3-204ENST00000366290 LAMTOR3Q9UHA4 124 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms