RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 TRAV7A0A075B6U4 112 aa4.62□□□□□ -1.67
CLCN3-202ENST00000360642 LOC107984640A0A0U1RRK4 108 aa4.62□□□□□ -1.67
CLCN3-202ENST00000360642 MRPL55Q7Z7F7 128 aaKnown RBP4.62□□□□□ -1.67
CLCN3-202ENST00000360642 DEFB105AQ8NG35 78 aa4.62□□□□□ -1.67
CLCN3-202ENST00000360642 RPS28P62857 69 aaKnown RBP4.61□□□□□ -1.67
CLCN3-202ENST00000360642 ETDCA0A1B0GVM5 59 aa4.6□□□□□ -1.67
CLCN3-202ENST00000360642 EPM2AB3EWF7 344 aa4.6□□□□□ -1.67
CLCN3-202ENST00000360642 KRTAP1-5Q9BYS1 174 aa4.6□□□□□ -1.67
CLCN3-202ENST00000360642 DYNC2H1Q8NCM8 4307 aaKnown RBP4.6□□□□□ -1.67
CLCN3-202ENST00000360642 A0A1B0GW54 56 aa4.6□□□□□ -1.67
CLCN3-202ENST00000360642 FAM19A5Q7Z5A7 132 aaPredicted RBP4.6□□□□□ -1.67
CLCN3-202ENST00000360642 ST20-AS1Q8NBB2 130 aa4.6□□□□□ -1.67
CLCN3-202ENST00000360642 ERC2-IT1O76042 136 aa4.59□□□□□ -1.67
CLCN3-202ENST00000360642 NREPQ16612 68 aa4.59□□□□□ -1.67
CLCN3-202ENST00000360642 DNAH7Q8WXX0 4024 aa4.59□□□□□ -1.68
CLCN3-202ENST00000360642 A0A1W2PNM2 257 aa4.59□□□□□ -1.68
CLCN3-202ENST00000360642 CNBPP62633 177 aaKnown RBP4.59□□□□□ -1.68
CLCN3-202ENST00000360642 C20orf197Q8N268 126 aa4.59□□□□□ -1.68
CLCN3-202ENST00000360642 DPH3Q96FX2 82 aa4.59□□□□□ -1.68
CLCN3-202ENST00000360642 C3orf84H3BNL1 204 aa4.58□□□□□ -1.68
CLCN3-202ENST00000360642 J3KT08 172 aa4.58□□□□□ -1.68
CLCN3-202ENST00000360642 IGKV4-1P06312 121 aa4.58□□□□□ -1.68
CLCN3-202ENST00000360642 C16orf90A8MZG2 172 aa4.58□□□□□ -1.68
CLCN3-202ENST00000360642 KLKP1Q107X0 134 aa4.58□□□□□ -1.68
CLCN3-202ENST00000360642 Q8N9L7 120 aa4.58□□□□□ -1.68
CLCN3-202ENST00000360642 SRRM2Q9UQ35 2752 aaKnown RBP4.58□□□□□ -1.68
CLCN3-202ENST00000360642 A0A096LNI7 61 aa4.57□□□□□ -1.68
CLCN3-202ENST00000360642 C1orf137Q5JT78 98 aa4.57□□□□□ -1.68
CLCN3-202ENST00000360642 SPRR4Q96PI1 79 aa4.57□□□□□ -1.68
CLCN3-202ENST00000360642 APLNQ9ULZ1 77 aa4.57□□□□□ -1.68
CLCN3-202ENST00000360642 A0A0G2JQZ4 141 aa4.57□□□□□ -1.68
CLCN3-202ENST00000360642 A0A1W2PNN7 141 aa4.57□□□□□ -1.68
CLCN3-202ENST00000360642 FUSP35637 526 aaKnown RBP eCLIP4.57□□□□□ -1.68
CLCN3-202ENST00000360642 H7BZZ5 65 aa4.56□□□□□ -1.68
CLCN3-202ENST00000360642 BPY2O14599 106 aa4.56□□□□□ -1.68
CLCN3-202ENST00000360642 UBE2BP63146 152 aa4.56□□□□□ -1.68
CLCN3-202ENST00000360642 Q8N9P0 234 aaPredicted RBP4.55□□□□□ -1.68
CLCN3-202ENST00000360642 PLECQ15149 4684 aaKnown RBP4.55□□□□□ -1.68
CLCN3-202ENST00000360642 IGKV2-24A0A0C4DH68 120 aa4.54□□□□□ -1.68
CLCN3-202ENST00000360642 PSCAO43653 123 aa4.53□□□□□ -1.68
CLCN3-202ENST00000360642 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.53□□□□□ -1.68
CLCN3-202ENST00000360642 SNURFQ9Y675 71 aa4.53□□□□□ -1.68
CLCN3-202ENST00000360642 UBE2DNLQ8IWF7 75 aa4.53□□□□□ -1.68
CLCN3-202ENST00000360642 IGLV8-61A0A075B6I0 122 aa4.52□□□□□ -1.69
CLCN3-202ENST00000360642 LRCOL1A6NCL2 159 aa4.52□□□□□ -1.69
CLCN3-202ENST00000360642 PRLHP81277 87 aa4.52□□□□□ -1.69
CLCN3-202ENST00000360642 KRTAP11-1Q8IUC1 163 aa4.52□□□□□ -1.69
CLCN3-202ENST00000360642 B9D2Q9BPU9 175 aa4.52□□□□□ -1.69
CLCN3-202ENST00000360642 FAM236DA0A1B0GTK5 79 aa4.51□□□□□ -1.69
CLCN3-202ENST00000360642 FAM236CP0DP71 79 aa4.51□□□□□ -1.69
CLCN3-202ENST00000360642 DSCR10P59022 87 aa4.51□□□□□ -1.69
CLCN3-202ENST00000360642 IGFL1Q6UW32 110 aa4.51□□□□□ -1.69
CLCN3-202ENST00000360642 H0Y9J4 135 aa4.51□□□□□ -1.69
CLCN3-202ENST00000360642 NDUFC1O43677 76 aa4.51□□□□□ -1.69
CLCN3-202ENST00000360642 C9orf163Q8N9P6 203 aa4.51□□□□□ -1.69
CLCN3-202ENST00000360642 TMEM254Q8TBM7 123 aa4.51□□□□□ -1.69
CLCN3-202ENST00000360642 CHTF8P0CG12 524 aa4.5□□□□□ -1.69
CLCN3-202ENST00000360642 F8WEM9 126 aa4.5□□□□□ -1.69
CLCN3-202ENST00000360642 PHF5AQ7RTV0 110 aaKnown RBP4.5□□□□□ -1.69
CLCN3-202ENST00000360642 Q6ZRN7 208 aaPredicted RBP4.5□□□□□ -1.69
CLCN3-202ENST00000360642 A0A0U1RQV1 116 aa4.49□□□□□ -1.69
CLCN3-202ENST00000360642 SPRR1BP22528 89 aa4.49□□□□□ -1.69
CLCN3-202ENST00000360642 TYMSOSQ8TAI1 123 aa4.49□□□□□ -1.69
CLCN3-202ENST00000360642 NBDYA0A0U1RRE5 68 aa4.49□□□□□ -1.69
CLCN3-202ENST00000360642 HIGD2AQ9BW72 106 aa4.49□□□□□ -1.69
CLCN3-202ENST00000360642 V9GYY9 64 aa4.49□□□□□ -1.69
CLCN3-202ENST00000360642 STARD9Q9P2P6 4700 aa4.49□□□□□ -1.69
CLCN3-202ENST00000360642 LCE6AA0A183 80 aa4.48□□□□□ -1.69
CLCN3-202ENST00000360642 K7EQZ3 153 aa4.48□□□□□ -1.69
CLCN3-202ENST00000360642 SERP1Q9Y6X1 66 aa4.48□□□□□ -1.69
CLCN3-202ENST00000360642 DEFB116Q30KQ4 102 aa4.48□□□□□ -1.69
CLCN3-202ENST00000360642 LINC00336Q6ZUF6 198 aa4.47□□□□□ -1.69
CLCN3-202ENST00000360642 DNHD1Q96M86 4753 aa4.47□□□□□ -1.69
CLCN3-202ENST00000360642 NDUFAF8A1L188 74 aa4.47□□□□□ -1.69
CLCN3-202ENST00000360642 Q5XG85 94 aa4.47□□□□□ -1.69
CLCN3-202ENST00000360642 PKIGQ9Y2B9 76 aa4.47□□□□□ -1.69
CLCN3-202ENST00000360642 NUPR2A6NF83 97 aa4.46□□□□□ -1.69
CLCN3-202ENST00000360642 UBE2AP49459 152 aa4.46□□□□□ -1.69
CLCN3-202ENST00000360642 LINC00474Q9P2X8 69 aa4.46□□□□□ -1.69
CLCN3-202ENST00000360642 PRKDCP78527 4128 aaKnown RBP4.46□□□□□ -1.7
CLCN3-202ENST00000360642 PANO1I0J062 215 aa4.46□□□□□ -1.7
CLCN3-202ENST00000360642 KRTAP13-1Q8IUC0 172 aa4.46□□□□□ -1.7
CLCN3-202ENST00000360642 VPS13DQ5THJ4 4388 aa4.46□□□□□ -1.7
CLCN3-202ENST00000360642 ATP5EP56381 51 aaPredicted RBP4.46□□□□□ -1.7
CLCN3-202ENST00000360642 A0A087WSZ3 146 aa4.45□□□□□ -1.7
CLCN3-202ENST00000360642 HCG22E2RYF7 251 aa4.44□□□□□ -1.7
CLCN3-202ENST00000360642 KMT2AQ03164 3969 aa4.44□□□□□ -1.7
CLCN3-202ENST00000360642 HECTD4Q9Y4D8 3996 aa4.44□□□□□ -1.7
CLCN3-202ENST00000360642 SPACA4Q8TDM5 124 aa4.43□□□□□ -1.7
CLCN3-202ENST00000360642 FRAS1Q86XX4 4008 aa4.43□□□□□ -1.7
CLCN3-202ENST00000360642 ZCCHC13Q8WW36 166 aaKnown RBP4.43□□□□□ -1.7
CLCN3-202ENST00000360642 C4orf26Q17RF5 130 aa4.42□□□□□ -1.7
CLCN3-202ENST00000360642 LINC00472Q9H8W2 130 aa4.42□□□□□ -1.7
CLCN3-202ENST00000360642 C5orf47Q569G3 176 aa4.41□□□□□ -1.7
CLCN3-202ENST00000360642 DNAH2Q9P225 4427 aa4.41□□□□□ -1.7
CLCN3-202ENST00000360642 A0A087WTM6 91 aa4.41□□□□□ -1.7
CLCN3-202ENST00000360642 RPL37AP61513 92 aaKnown RBP4.41□□□□□ -1.7
CLCN3-202ENST00000360642 FP248Q71RG6 208 aaPredicted RBP4.4□□□□□ -1.71
CLCN3-202ENST00000360642 SMIM26A0A096LP01 95 aa4.4□□□□□ -1.71
CLCN3-202ENST00000360642 PRR15Q8IV56 129 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms