RNA–Protein interactions for RNA: ENST00000360439.8

SIN3A-201, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 5,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-201ENST00000360439 H3BNG1 76 aa6.59□□□□□ -1.35
SIN3A-201ENST00000360439 OCR1Q9BZK8 76 aa6.59□□□□□ -1.35
SIN3A-201ENST00000360439 NBDYA0A0U1RRE5 68 aa6.59□□□□□ -1.35
SIN3A-201ENST00000360439 LINC01556Q5JQF7 62 aa6.59□□□□□ -1.35
SIN3A-201ENST00000360439 C1orf137Q5JT78 98 aa6.59□□□□□ -1.35
SIN3A-201ENST00000360439 IGLV6-57P01721 117 aa6.59□□□□□ -1.35
SIN3A-201ENST00000360439 SPINK7P58062 85 aa6.58□□□□□ -1.36
SIN3A-201ENST00000360439 KMT2BQ9UMN6 2715 aaPredicted RBP6.58□□□□□ -1.36
SIN3A-201ENST00000360439 RELNP78509 3460 aa6.57□□□□□ -1.36
SIN3A-201ENST00000360439 RPL37AP8A6NKH3 93 aa6.57□□□□□ -1.36
SIN3A-201ENST00000360439 FLG2Q5D862 2391 aaPredicted RBP6.57□□□□□ -1.36
SIN3A-201ENST00000360439 TENM4Q6N022 2769 aa6.56□□□□□ -1.36
SIN3A-201ENST00000360439 C6orf48Q9UBA6 75 aa6.54□□□□□ -1.36
SIN3A-201ENST00000360439 UQCR11O14957 56 aa6.54□□□□□ -1.36
SIN3A-201ENST00000360439 ASH1LQ9NR48 2969 aaKnown RBP6.54□□□□□ -1.36
SIN3A-201ENST00000360439 NBEAL2Q6ZNJ1 2754 aa6.52□□□□□ -1.37
SIN3A-201ENST00000360439 K7EQZ3 153 aa6.52□□□□□ -1.37
SIN3A-201ENST00000360439 SPINK1P00995 79 aa6.52□□□□□ -1.37
SIN3A-201ENST00000360439 LUZP6Q538Z0 58 aa6.52□□□□□ -1.37
SIN3A-201ENST00000360439 PRR34Q9NV39 138 aa6.51□□□□□ -1.37
SIN3A-201ENST00000360439 A0A087WSZ3 146 aa6.5□□□□□ -1.37
SIN3A-201ENST00000360439 C22orf24Q9Y442 160 aa6.5□□□□□ -1.37
SIN3A-201ENST00000360439 H3BPC8 53 aa6.47□□□□□ -1.37
SIN3A-201ENST00000360439 RTL8CO15255 209 aa6.47□□□□□ -1.37
SIN3A-201ENST00000360439 DNAH10OSP0CZ25 163 aa6.47□□□□□ -1.37
SIN3A-201ENST00000360439 DCHS2Q6V1P9 2916 aa6.47□□□□□ -1.37
SIN3A-201ENST00000360439 HRNRQ86YZ3 2850 aaPredicted RBP6.47□□□□□ -1.37
SIN3A-201ENST00000360439 WDFY3Q8IZQ1 3526 aa6.46□□□□□ -1.38
SIN3A-201ENST00000360439 RPL37AP61513 92 aaKnown RBP6.45□□□□□ -1.38
SIN3A-201ENST00000360439 CASC10Q5T4H9 136 aa6.45□□□□□ -1.38
SIN3A-201ENST00000360439 APLNQ9ULZ1 77 aa6.45□□□□□ -1.38
SIN3A-201ENST00000360439 CRIPTQ9P021 101 aa6.45□□□□□ -1.38
SIN3A-201ENST00000360439 Q9BRP9 147 aa6.45□□□□□ -1.38
SIN3A-201ENST00000360439 LINC00528Q8N1L1 170 aa6.44□□□□□ -1.38
SIN3A-201ENST00000360439 ACYP2P14621 99 aa6.44□□□□□ -1.38
SIN3A-201ENST00000360439 FAM229AH3BQW9 127 aa6.43□□□□□ -1.38
SIN3A-201ENST00000360439 Q6ZRX8 168 aa6.43□□□□□ -1.38
SIN3A-201ENST00000360439 SPANXA2-OT1Q8N9U9 137 aa6.43□□□□□ -1.38
SIN3A-201ENST00000360439 NF1P21359 2839 aa6.43□□□□□ -1.38
SIN3A-201ENST00000360439 IGLV9-49A0A0B4J1Y8 123 aa6.43□□□□□ -1.38
SIN3A-201ENST00000360439 KCNQ1DNQ9H478 68 aa6.43□□□□□ -1.38
SIN3A-201ENST00000360439 LINC01558Q9Y6Z2 57 aa6.43□□□□□ -1.38
SIN3A-201ENST00000360439 PLA2G2DQ9UNK4 145 aa6.42□□□□□ -1.38
SIN3A-201ENST00000360439 PLA2G1BP04054 148 aaKnown RBP6.41□□□□□ -1.38
SIN3A-201ENST00000360439 Q8NBF4 154 aa6.41□□□□□ -1.38
SIN3A-201ENST00000360439 A8MWP4 228 aa6.41□□□□□ -1.38
SIN3A-201ENST00000360439 NDUFAF8A1L188 74 aa6.4□□□□□ -1.38
SIN3A-201ENST00000360439 SMG1Q96Q15 3661 aaKnown RBP6.4□□□□□ -1.39
SIN3A-201ENST00000360439 TLX1NBP0CAT3 122 aa6.39□□□□□ -1.39
SIN3A-201ENST00000360439 STAB2Q8WWQ8 2551 aa6.39□□□□□ -1.39
SIN3A-201ENST00000360439 CHTF8P0CG12 524 aa6.39□□□□□ -1.39
SIN3A-201ENST00000360439 ROMO1P60602 79 aa6.38□□□□□ -1.39
SIN3A-201ENST00000360439 KRTAP21-3Q3LHN1 58 aa6.38□□□□□ -1.39
SIN3A-201ENST00000360439 SPINK6Q6UWN8 80 aa6.38□□□□□ -1.39
SIN3A-201ENST00000360439 C15orf56Q8N910 161 aa6.38□□□□□ -1.39
SIN3A-201ENST00000360439 C9orf163Q8N9P6 203 aa6.38□□□□□ -1.39
SIN3A-201ENST00000360439 PRLHP81277 87 aa6.36□□□□□ -1.39
SIN3A-201ENST00000360439 A0A087WTM6 91 aa6.36□□□□□ -1.39
SIN3A-201ENST00000360439 CIRBP-AS1Q8TBR5 109 aa6.36□□□□□ -1.39
SIN3A-201ENST00000360439 FBN2P35556 2912 aa6.35□□□□□ -1.39
SIN3A-201ENST00000360439 IGLV1-50A0A075B6I6 118 aa6.35□□□□□ -1.39
SIN3A-201ENST00000360439 IGLV5-37A0A075B6J1 123 aa6.35□□□□□ -1.39
SIN3A-201ENST00000360439 SMR3BP02814 79 aaPredicted RBP6.34□□□□□ -1.39
SIN3A-201ENST00000360439 IGLV5-48A0A075B6I7 105 aa6.33□□□□□ -1.4
SIN3A-201ENST00000360439 MXRA5Q9NR99 2828 aa6.32□□□□□ -1.4
SIN3A-201ENST00000360439 Q6ZR54 194 aa6.32□□□□□ -1.4
SIN3A-201ENST00000360439 Q8N377 158 aa6.32□□□□□ -1.4
SIN3A-201ENST00000360439 TNP2Q05952 138 aa6.31□□□□□ -1.4
SIN3A-201ENST00000360439 A0A1W2PNM2 257 aa6.31□□□□□ -1.4
SIN3A-201ENST00000360439 ZFHX4Q86UP3 3567 aa6.3□□□□□ -1.4
SIN3A-201ENST00000360439 J3QL48 77 aa6.3□□□□□ -1.4
SIN3A-201ENST00000360439 TP53AIP1Q9HCN2 124 aa6.29□□□□□ -1.4
SIN3A-201ENST00000360439 Q8NDZ9 215 aa6.29□□□□□ -1.4
SIN3A-201ENST00000360439 IGLV7-46A0A075B6I9 117 aa6.28□□□□□ -1.4
SIN3A-201ENST00000360439 SEC61BP60468 96 aaKnown RBP6.28□□□□□ -1.4
SIN3A-201ENST00000360439 DMBT1Q9UGM3 2413 aaPredicted RBP6.27□□□□□ -1.41
SIN3A-201ENST00000360439 A0A0G2JQZ4 141 aa6.27□□□□□ -1.41
SIN3A-201ENST00000360439 A0A1W2PNN7 141 aa6.27□□□□□ -1.41
SIN3A-201ENST00000360439 FAM168BA1KXE4 195 aa6.27□□□□□ -1.41
SIN3A-201ENST00000360439 NBPF19A0A087WUL8 3843 aa6.26□□□□□ -1.41
SIN3A-201ENST00000360439 ASB16-AS1Q495Z4 193 aa6.26□□□□□ -1.41
SIN3A-201ENST00000360439 DMAC1Q96GE9 116 aa6.26□□□□□ -1.41
SIN3A-201ENST00000360439 ZFHX3Q15911 3703 aa6.25□□□□□ -1.41
SIN3A-201ENST00000360439 SPRR4Q96PI1 79 aa6.25□□□□□ -1.41
SIN3A-201ENST00000360439 PDZD2O15018 2839 aa6.25□□□□□ -1.41
SIN3A-201ENST00000360439 LCE6AA0A183 80 aa6.24□□□□□ -1.41
SIN3A-201ENST00000360439 DSCR10P59022 87 aa6.24□□□□□ -1.41
SIN3A-201ENST00000360439 OTOGQ6ZRI0 2925 aa6.23□□□□□ -1.41
SIN3A-201ENST00000360439 HRES1P13985 223 aa6.23□□□□□ -1.41
SIN3A-201ENST00000360439 IGFL1Q6UW32 110 aa6.22□□□□□ -1.41
SIN3A-201ENST00000360439 C8orf17Q9NRJ1 99 aa6.22□□□□□ -1.41
SIN3A-201ENST00000360439 SPRR1AP35321 89 aa6.21□□□□□ -1.42
SIN3A-201ENST00000360439 KRTAP26-1Q6PEX3 210 aa6.21□□□□□ -1.42
SIN3A-201ENST00000360439 IGKV2D-30A0A075B6S6 120 aa6.2□□□□□ -1.42
SIN3A-201ENST00000360439 IGKV2-30P06310 120 aa6.2□□□□□ -1.42
SIN3A-201ENST00000360439 KRTAP25-1Q3LHN0 102 aa6.2□□□□□ -1.42
SIN3A-201ENST00000360439 ZCCHC13Q8WW36 166 aaKnown RBP6.2□□□□□ -1.42
SIN3A-201ENST00000360439 TYMSOSQ8TAI1 123 aa6.19□□□□□ -1.42
SIN3A-201ENST00000360439 CNBPP62633 177 aaKnown RBP6.19□□□□□ -1.42
SIN3A-201ENST00000360439 SPACA4Q8TDM5 124 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms