RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 MXRA5Q9NR99 2828 aa10.1□□□□□ -0.79
RTN3-205ENST00000356000 WFDC10BQ8IUB3 73 aa10.09□□□□□ -0.79
RTN3-205ENST00000356000 SPAG11AQ6PDA7 123 aa10.09□□□□□ -0.79
RTN3-205ENST00000356000 CMC4P56277 68 aaPredicted RBP10.08□□□□□ -0.8
RTN3-205ENST00000356000 PLA2G1BP04054 148 aaKnown RBP10.07□□□□□ -0.8
RTN3-205ENST00000356000 SONP18583 2426 aaKnown RBP10.07□□□□□ -0.8
RTN3-205ENST00000356000 EGFEM1PQ0D2K5 195 aa10.07□□□□□ -0.8
RTN3-205ENST00000356000 DHRS4-AS1Q9P1J3 65 aa10.07□□□□□ -0.8
RTN3-205ENST00000356000 VPS13CQ709C8 3753 aa10.06□□□□□ -0.8
RTN3-205ENST00000356000 ATRQ13535 2644 aa10.06□□□□□ -0.8
RTN3-205ENST00000356000 PRR34Q9NV39 138 aa10.06□□□□□ -0.8
RTN3-205ENST00000356000 ADM2Q7Z4H4 148 aa10.03□□□□□ -0.8
RTN3-205ENST00000356000 CAMK2N2Q96S95 79 aa10.03□□□□□ -0.8
RTN3-205ENST00000356000 TLN2Q9Y4G6 2542 aa10.03□□□□□ -0.8
RTN3-205ENST00000356000 Q6YL49 198 aa10.03□□□□□ -0.8
RTN3-205ENST00000356000 C19orf73Q9NVV2 129 aa10.03□□□□□ -0.8
RTN3-205ENST00000356000 Q8NAQ8 132 aa10.02□□□□□ -0.81
RTN3-205ENST00000356000 ASB16-AS1Q495Z4 193 aa10.02□□□□□ -0.81
RTN3-205ENST00000356000 Q6ZRX8 168 aa10.02□□□□□ -0.81
RTN3-205ENST00000356000 STAB1Q9NY15 2570 aa10.01□□□□□ -0.81
RTN3-205ENST00000356000 ZANQ9Y493 2812 aa10□□□□□ -0.81
RTN3-205ENST00000356000 IGLV5-37A0A075B6J1 123 aa9.98□□□□□ -0.81
RTN3-205ENST00000356000 IGLV1-50A0A075B6I6 118 aa9.97□□□□□ -0.81
RTN3-205ENST00000356000 KRTAP4-16G5E9R7 235 aaPredicted RBP9.97□□□□□ -0.81
RTN3-205ENST00000356000 RPL37AP61513 92 aaKnown RBP9.97□□□□□ -0.81
RTN3-205ENST00000356000 LINC00476Q8WZB0 136 aa9.96□□□□□ -0.82
RTN3-205ENST00000356000 A0A087X002 238 aa9.95□□□□□ -0.82
RTN3-205ENST00000356000 SERTAD4-AS1Q5TG53 156 aa9.95□□□□□ -0.82
RTN3-205ENST00000356000 LELP1Q5T871 98 aa9.94□□□□□ -0.82
RTN3-205ENST00000356000 IGLV1-51P01701 117 aa9.94□□□□□ -0.82
RTN3-205ENST00000356000 SPRR1AP35321 89 aa9.91□□□□□ -0.82
RTN3-205ENST00000356000 IGFL1Q6UW32 110 aa9.91□□□□□ -0.82
RTN3-205ENST00000356000 PCOTHQ58A44 107 aa9.9□□□□□ -0.82
RTN3-205ENST00000356000 X6R8D5 127 aa9.9□□□□□ -0.82
RTN3-205ENST00000356000 A0A087WSZ3 146 aa9.9□□□□□ -0.82
RTN3-205ENST00000356000 A0A0G2JQZ4 141 aa9.9□□□□□ -0.82
RTN3-205ENST00000356000 A0A1W2PNN7 141 aa9.9□□□□□ -0.82
RTN3-205ENST00000356000 RTL8CO15255 209 aa9.9□□□□□ -0.82
RTN3-205ENST00000356000 CUBNO60494 3623 aa9.9□□□□□ -0.82
RTN3-205ENST00000356000 HRES1P13985 223 aa9.89□□□□□ -0.83
RTN3-205ENST00000356000 C15orf56Q8N910 161 aa9.87□□□□□ -0.83
RTN3-205ENST00000356000 KRTAP26-1Q6PEX3 210 aa9.87□□□□□ -0.83
RTN3-205ENST00000356000 A8MWP4 228 aa9.86□□□□□ -0.83
RTN3-205ENST00000356000 RPL37AP8A6NKH3 93 aa9.85□□□□□ -0.83
RTN3-205ENST00000356000 PLA2G2DQ9UNK4 145 aa9.83□□□□□ -0.84
RTN3-205ENST00000356000 IGLV8-61A0A075B6I0 122 aa9.82□□□□□ -0.84
RTN3-205ENST00000356000 RETNLBQ9BQ08 111 aa9.81□□□□□ -0.84
RTN3-205ENST00000356000 MMP24-AS1A0A0U1RRL7 71 aa9.79□□□□□ -0.84
RTN3-205ENST00000356000 LINC00472Q9H8W2 130 aa9.78□□□□□ -0.84
RTN3-205ENST00000356000 DEFB131BA0A096LNP1 70 aa9.77□□□□□ -0.85
RTN3-205ENST00000356000 KRTAP10-3P60369 221 aa9.77□□□□□ -0.85
RTN3-205ENST00000356000 IGKV2-24A0A0C4DH68 120 aa9.76□□□□□ -0.85
RTN3-205ENST00000356000 Q6ZR54 194 aa9.76□□□□□ -0.85
RTN3-205ENST00000356000 TP53AIP1Q9HCN2 124 aa9.76□□□□□ -0.85
RTN3-205ENST00000356000 DEFB4AO15263 64 aa9.76□□□□□ -0.85
RTN3-205ENST00000356000 CSAG1Q6PB30 78 aa9.74□□□□□ -0.85
RTN3-205ENST00000356000 SPATA8Q6RVD6 105 aa9.74□□□□□ -0.85
RTN3-205ENST00000356000 NBEAL2Q6ZNJ1 2754 aa9.73□□□□□ -0.85
RTN3-205ENST00000356000 NBEAL1Q6ZS30 2694 aa9.73□□□□□ -0.85
RTN3-205ENST00000356000 TLX1NBP0CAT3 122 aa9.73□□□□□ -0.85
RTN3-205ENST00000356000 FAM168BA1KXE4 195 aa9.72□□□□□ -0.85
RTN3-205ENST00000356000 KRTAP7-1Q8IUC3 87 aa9.7□□□□□ -0.86
RTN3-205ENST00000356000 MEGF8Q7Z7M0 2845 aa9.69□□□□□ -0.86
RTN3-205ENST00000356000 H0Y9J4 135 aa9.69□□□□□ -0.86
RTN3-205ENST00000356000 HTN3P15516 51 aa9.69□□□□□ -0.86
RTN3-205ENST00000356000 REG3GQ6UW15 175 aa9.67□□□□□ -0.86
RTN3-205ENST00000356000 DEFB135Q30KP9 77 aa9.63□□□□□ -0.87
RTN3-205ENST00000356000 TENM1Q9UKZ4 2725 aa9.63□□□□□ -0.87
RTN3-205ENST00000356000 ZNF706Q9Y5V0 76 aaPredicted RBP9.62□□□□□ -0.87
RTN3-205ENST00000356000 MGAM2Q2M2H8 2515 aa9.61□□□□□ -0.87
RTN3-205ENST00000356000 WWC2-AS2Q96NR7 200 aa9.61□□□□□ -0.87
RTN3-205ENST00000356000 SPART-AS1P0CW21 52 aa9.6□□□□□ -0.87
RTN3-205ENST00000356000 MIR22HGQ0VDD5 57 aa9.6□□□□□ -0.87
RTN3-205ENST00000356000 C1orf134Q5TEV5 83 aa9.6□□□□□ -0.87
RTN3-205ENST00000356000 ALMS1Q8TCU4 4167 aa9.59□□□□□ -0.87
RTN3-205ENST00000356000 A0A1B0GU69 56 aa9.59□□□□□ -0.87
RTN3-205ENST00000356000 CMYA5Q8N3K9 4069 aa9.58□□□□□ -0.88
RTN3-205ENST00000356000 ACYP2P14621 99 aa9.57□□□□□ -0.88
RTN3-205ENST00000356000 C8orf17Q9NRJ1 99 aa9.56□□□□□ -0.88
RTN3-205ENST00000356000 TRRAPQ9Y4A5 3859 aa9.56□□□□□ -0.88
RTN3-205ENST00000356000 UQCR11O14957 56 aa9.55□□□□□ -0.88
RTN3-205ENST00000356000 PRLHP81277 87 aa9.55□□□□□ -0.88
RTN3-205ENST00000356000 K7EIL1 84 aa9.53□□□□□ -0.88
RTN3-205ENST00000356000 OXLD1Q5BKU9 147 aa9.53□□□□□ -0.88
RTN3-205ENST00000356000 TENM2Q9NT68 2774 aa9.53□□□□□ -0.88
RTN3-205ENST00000356000 SPRR1BP22528 89 aa9.52□□□□□ -0.89
RTN3-205ENST00000356000 ZNF861PO60384 105 aa9.52□□□□□ -0.89
RTN3-205ENST00000356000 ROMO1P60602 79 aa9.51□□□□□ -0.89
RTN3-205ENST00000356000 Q96NJ1 140 aa9.51□□□□□ -0.89
RTN3-205ENST00000356000 LINC01556Q5JQF7 62 aa9.48□□□□□ -0.89
RTN3-205ENST00000356000 H3BNG1 76 aa9.48□□□□□ -0.89
RTN3-205ENST00000356000 MRPL34Q9BQ48 92 aaKnown RBP9.48□□□□□ -0.89
RTN3-205ENST00000356000 DMAC1Q96GE9 116 aa9.45□□□□□ -0.9
RTN3-205ENST00000356000 KRTAP10-11P60412 298 aa9.44□□□□□ -0.9
RTN3-205ENST00000356000 PRKDCP78527 4128 aaKnown RBP9.44□□□□□ -0.9
RTN3-205ENST00000356000 DNAH3Q8TD57 4116 aa9.44□□□□□ -0.9
RTN3-205ENST00000356000 VWFP04275 2813 aa9.43□□□□□ -0.9
RTN3-205ENST00000356000 PKD1L1Q8TDX9 2849 aa9.43□□□□□ -0.9
RTN3-205ENST00000356000 IGHV6-1A0A0B4J1U7 121 aa9.43□□□□□ -0.9
RTN3-205ENST00000356000 A0A1B0GVX0 72 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms