RNA–Protein interactions for RNA: ENST00000355451.7

NUDCD3-202, Transcript of NudC domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD3, Length 8,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-202ENST00000355451 CHD7Q9P2D1 2997 aa7.35□□□□□ -1.23
NUDCD3-202ENST00000355451 FLNBO75369 2602 aaKnown RBP7.33□□□□□ -1.24
NUDCD3-202ENST00000355451 C19orf73Q9NVV2 129 aa7.33□□□□□ -1.24
NUDCD3-202ENST00000355451 SPEGQ15772 3267 aa7.33□□□□□ -1.24
NUDCD3-202ENST00000355451 CNBPP62633 177 aaKnown RBP7.32□□□□□ -1.24
NUDCD3-202ENST00000355451 AKAP13Q12802 2813 aa7.31□□□□□ -1.24
NUDCD3-202ENST00000355451 SMCPP49901 116 aaPredicted RBP7.31□□□□□ -1.24
NUDCD3-202ENST00000355451 WDFY4Q6ZS81 3184 aa7.31□□□□□ -1.24
NUDCD3-202ENST00000355451 COL6A3P12111 3177 aa7.3□□□□□ -1.24
NUDCD3-202ENST00000355451 ZCCHC13Q8WW36 166 aaKnown RBP7.3□□□□□ -1.24
NUDCD3-202ENST00000355451 BAHCC1Q9P281 2608 aa7.29□□□□□ -1.24
NUDCD3-202ENST00000355451 KLKP1Q107X0 134 aa7.28□□□□□ -1.24
NUDCD3-202ENST00000355451 PRR34Q9NV39 138 aa7.28□□□□□ -1.24
NUDCD3-202ENST00000355451 MYO15AQ9UKN7 3530 aa7.28□□□□□ -1.24
NUDCD3-202ENST00000355451 WDFY3Q8IZQ1 3526 aa7.26□□□□□ -1.25
NUDCD3-202ENST00000355451 Q8N9P0 234 aaPredicted RBP7.26□□□□□ -1.25
NUDCD3-202ENST00000355451 STAB2Q8WWQ8 2551 aa7.25□□□□□ -1.25
NUDCD3-202ENST00000355451 CEP295Q9C0D2 2601 aa7.25□□□□□ -1.25
NUDCD3-202ENST00000355451 FAM229BQ4G0N7 80 aa7.24□□□□□ -1.25
NUDCD3-202ENST00000355451 NBEAL1Q6ZS30 2694 aa7.24□□□□□ -1.25
NUDCD3-202ENST00000355451 OXTP01178 125 aa7.24□□□□□ -1.25
NUDCD3-202ENST00000355451 HTTP42858 3142 aa7.24□□□□□ -1.25
NUDCD3-202ENST00000355451 C20orf166-AS1Q96NR2 134 aa7.23□□□□□ -1.25
NUDCD3-202ENST00000355451 EYSQ5T1H1 3165 aa7.23□□□□□ -1.25
NUDCD3-202ENST00000355451 H3BS24 57 aa7.21□□□□□ -1.26
NUDCD3-202ENST00000355451 ITPR3Q14573 2671 aa7.2□□□□□ -1.26
NUDCD3-202ENST00000355451 A0A1W2PNM2 257 aa7.2□□□□□ -1.26
NUDCD3-202ENST00000355451 ROMO1P60602 79 aa7.2□□□□□ -1.26
NUDCD3-202ENST00000355451 ADM2Q7Z4H4 148 aa7.19□□□□□ -1.26
NUDCD3-202ENST00000355451 RPL37P61927 97 aaKnown RBP7.18□□□□□ -1.26
NUDCD3-202ENST00000355451 MGAQ8IWI9 3026 aa7.17□□□□□ -1.26
NUDCD3-202ENST00000355451 PRO0461Q9UI25 63 aa7.17□□□□□ -1.26
NUDCD3-202ENST00000355451 GIG44P09565 113 aaPredicted RBP7.16□□□□□ -1.26
NUDCD3-202ENST00000355451 KRTAP10-3P60369 221 aa7.15□□□□□ -1.26
NUDCD3-202ENST00000355451 SPTBN5Q9NRC6 3674 aaKnown RBP7.15□□□□□ -1.26
NUDCD3-202ENST00000355451 CFAP47Q6ZTR5 3102 aa7.15□□□□□ -1.27
NUDCD3-202ENST00000355451 FRYLO94915 3013 aa7.13□□□□□ -1.27
NUDCD3-202ENST00000355451 HELZ2Q9BYK8 2649 aaKnown RBP7.12□□□□□ -1.27
NUDCD3-202ENST00000355451 FRYQ5TBA9 3013 aa7.11□□□□□ -1.27
NUDCD3-202ENST00000355451 Q75L30 129 aa7.1□□□□□ -1.27
NUDCD3-202ENST00000355451 PRAC1Q96KF2 57 aa7.08□□□□□ -1.28
NUDCD3-202ENST00000355451 BOD1L1Q8NFC6 3051 aa7.07□□□□□ -1.28
NUDCD3-202ENST00000355451 LINC01558Q9Y6Z2 57 aa7.07□□□□□ -1.28
NUDCD3-202ENST00000355451 MAP1AP78559 2803 aaPredicted RBP7.06□□□□□ -1.28
NUDCD3-202ENST00000355451 Q8NDZ9 215 aa7.05□□□□□ -1.28
NUDCD3-202ENST00000355451 TRANK1O15050 2925 aa7.05□□□□□ -1.28
NUDCD3-202ENST00000355451 KLK9Q2XQG4 91 aa7.05□□□□□ -1.28
NUDCD3-202ENST00000355451 Q5W150 140 aa7.05□□□□□ -1.28
NUDCD3-202ENST00000355451 PLAC8Q9NZF1 115 aa7.04□□□□□ -1.28
NUDCD3-202ENST00000355451 CENPEQ02224 2701 aa7.04□□□□□ -1.28
NUDCD3-202ENST00000355451 FLNAP21333 2647 aaKnown RBP7.03□□□□□ -1.28
NUDCD3-202ENST00000355451 NOTCH1P46531 2555 aa7.03□□□□□ -1.28
NUDCD3-202ENST00000355451 SETXQ7Z333 2677 aaKnown RBP7.03□□□□□ -1.28
NUDCD3-202ENST00000355451 TEX15Q9BXT5 2789 aa7.03□□□□□ -1.28
NUDCD3-202ENST00000355451 SPATA8Q6RVD6 105 aa7.03□□□□□ -1.28
NUDCD3-202ENST00000355451 FP248Q71RG6 208 aaPredicted RBP7.02□□□□□ -1.29
NUDCD3-202ENST00000355451 P0C880 135 aa7.01□□□□□ -1.29
NUDCD3-202ENST00000355451 EIF4EBP3O60516 100 aaPredicted RBP7.01□□□□□ -1.29
NUDCD3-202ENST00000355451 KRTAP16-1A8MUX0 517 aa7□□□□□ -1.29
NUDCD3-202ENST00000355451 DSPP15924 2871 aaKnown RBP7□□□□□ -1.29
NUDCD3-202ENST00000355451 LCE6AA0A183 80 aa7□□□□□ -1.29
NUDCD3-202ENST00000355451 KALRNO60229 2985 aa6.99□□□□□ -1.29
NUDCD3-202ENST00000355451 ASPMQ8IZT6 3477 aa6.99□□□□□ -1.29
NUDCD3-202ENST00000355451 COL6A5A8TX70 2615 aa6.98□□□□□ -1.29
NUDCD3-202ENST00000355451 OCR1Q9BZK8 76 aa6.98□□□□□ -1.29
NUDCD3-202ENST00000355451 UNC79Q9P2D8 2635 aa6.98□□□□□ -1.29
NUDCD3-202ENST00000355451 ASH1LQ9NR48 2969 aaKnown RBP6.97□□□□□ -1.29
NUDCD3-202ENST00000355451 CHD6Q8TD26 2715 aa6.96□□□□□ -1.3
NUDCD3-202ENST00000355451 SPRR1BP22528 89 aa6.95□□□□□ -1.3
NUDCD3-202ENST00000355451 A8MUU9 505 aa6.93□□□□□ -1.3
NUDCD3-202ENST00000355451 MMP24-AS1A0A0U1RRL7 71 aa6.92□□□□□ -1.3
NUDCD3-202ENST00000355451 ADGRG4Q8IZF6 3080 aa6.91□□□□□ -1.3
NUDCD3-202ENST00000355451 DCHS1Q96JQ0 3298 aa6.9□□□□□ -1.3
NUDCD3-202ENST00000355451 PANO1I0J062 215 aa6.9□□□□□ -1.31
NUDCD3-202ENST00000355451 LRBAP50851 2863 aa6.9□□□□□ -1.31
NUDCD3-202ENST00000355451 TEP1Q99973 2627 aaKnown RBP6.89□□□□□ -1.31
NUDCD3-202ENST00000355451 C10orf95Q9H7T3 257 aa6.88□□□□□ -1.31
NUDCD3-202ENST00000355451 TNP1P09430 55 aa6.88□□□□□ -1.31
NUDCD3-202ENST00000355451 KRTAP10-1P60331 282 aa6.87□□□□□ -1.31
NUDCD3-202ENST00000355451 LAMA5O15230 3695 aa6.86□□□□□ -1.31
NUDCD3-202ENST00000355451 DMXL2Q8TDJ6 3036 aa6.86□□□□□ -1.31
NUDCD3-202ENST00000355451 ATMQ13315 3056 aa6.85□□□□□ -1.31
NUDCD3-202ENST00000355451 CHD9Q3L8U1 2897 aa6.83□□□□□ -1.32
NUDCD3-202ENST00000355451 LOC400499M0QZD8 3231 aa6.82□□□□□ -1.32
NUDCD3-202ENST00000355451 KRTAP10-2P60368 255 aa6.82□□□□□ -1.32
NUDCD3-202ENST00000355451 A0A096LNT2 108 aa6.8□□□□□ -1.32
NUDCD3-202ENST00000355451 CRYBG3Q68DQ2 2970 aa6.79□□□□□ -1.32
NUDCD3-202ENST00000355451 Q5VV11 94 aa6.79□□□□□ -1.32
NUDCD3-202ENST00000355451 Q6ZR54 194 aa6.79□□□□□ -1.32
NUDCD3-202ENST00000355451 ZZEF1O43149 2961 aa6.78□□□□□ -1.32
NUDCD3-202ENST00000355451 COL12A1Q99715 3063 aa6.78□□□□□ -1.32
NUDCD3-202ENST00000355451 NBEAQ8NFP9 2946 aa6.77□□□□□ -1.33
NUDCD3-202ENST00000355451 KRTAP10-8P60410 259 aa6.77□□□□□ -1.33
NUDCD3-202ENST00000355451 IGSF10Q6WRI0 2623 aa6.77□□□□□ -1.33
NUDCD3-202ENST00000355451 NSD1Q96L73 2696 aaPredicted RBP6.76□□□□□ -1.33
NUDCD3-202ENST00000355451 DMXL1Q9Y485 3027 aa6.76□□□□□ -1.33
NUDCD3-202ENST00000355451 LINC00472Q9H8W2 130 aa6.75□□□□□ -1.33
NUDCD3-202ENST00000355451 KRTAP1-3Q8IUG1 177 aa6.73□□□□□ -1.33
NUDCD3-202ENST00000355451 TACC2O95359 2948 aa6.73□□□□□ -1.33
NUDCD3-202ENST00000355451 KRTAP1-1Q07627 177 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms