RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 TRBV7-6A0A0J9YX20 115 aa8.81□□□□□ -1
PDGFA-201ENST00000354513 ELOF1P60002 83 aaKnown RBP8.81□□□□□ -1
PDGFA-201ENST00000354513 VAMP3Q15836 100 aa8.81□□□□□ -1
PDGFA-201ENST00000354513 SSBP3-AS1Q7Z2R9 100 aa8.8□□□□□ -1
PDGFA-201ENST00000354513 XP32Q5T750 250 aa8.79□□□□□ -1
PDGFA-201ENST00000354513 PSMB2P49721 201 aa8.78□□□□□ -1
PDGFA-201ENST00000354513 SEC61BP60468 96 aaKnown RBP8.78□□□□□ -1
PDGFA-201ENST00000354513 LCE2CQ5TA81 110 aa8.78□□□□□ -1
PDGFA-201ENST00000354513 DHRS4-AS1Q9P1J3 65 aa8.78□□□□□ -1
PDGFA-201ENST00000354513 TRIAP1O43715 76 aa8.77□□□□□ -1.01
PDGFA-201ENST00000354513 LINC01547P58512 204 aaPredicted RBP8.76□□□□□ -1.01
PDGFA-201ENST00000354513 SNHG12Q9BXW3 62 aa8.76□□□□□ -1.01
PDGFA-201ENST00000354513 SLC25A20O43772 301 aa8.75□□□□□ -1.01
PDGFA-201ENST00000354513 KRTAP19-2Q3LHN2 52 aa8.75□□□□□ -1.01
PDGFA-201ENST00000354513 ST20-AS1Q8NBB2 130 aa8.75□□□□□ -1.01
PDGFA-201ENST00000354513 H0YGX0 51 aa8.74□□□□□ -1.01
PDGFA-201ENST00000354513 LINC00575Q6W349 94 aa8.74□□□□□ -1.01
PDGFA-201ENST00000354513 COX6CP09669 75 aa8.73□□□□□ -1.01
PDGFA-201ENST00000354513 NAA38Q9BRA0 125 aaKnown RBP8.72□□□□□ -1.01
PDGFA-201ENST00000354513 hADV29S1A0JD25 119 aa8.71□□□□□ -1.02
PDGFA-201ENST00000354513 SCGB1C2P0DMR2 95 aa8.71□□□□□ -1.02
PDGFA-201ENST00000354513 C9orf153Q5TBE3 101 aa8.71□□□□□ -1.02
PDGFA-201ENST00000354513 TAX1BP3O14907 124 aa8.69□□□□□ -1.02
PDGFA-201ENST00000354513 SNCGO76070 127 aa8.69□□□□□ -1.02
PDGFA-201ENST00000354513 CLEC2BQ92478 149 aa8.69□□□□□ -1.02
PDGFA-201ENST00000354513 FAM218AQ96MZ4 157 aa8.69□□□□□ -1.02
PDGFA-201ENST00000354513 COL5A1-AS1Q5SY13 56 aa8.68□□□□□ -1.02
PDGFA-201ENST00000354513 C9orf118A6NHY6 69 aa8.67□□□□□ -1.02
PDGFA-201ENST00000354513 H3BUT2 72 aa8.67□□□□□ -1.02
PDGFA-201ENST00000354513 SPRR1BP22528 89 aa8.66□□□□□ -1.02
PDGFA-201ENST00000354513 Q6ZQY7 126 aa8.66□□□□□ -1.02
PDGFA-201ENST00000354513 DEFB105AQ8NG35 78 aa8.66□□□□□ -1.02
PDGFA-201ENST00000354513 A0A1B0GX51 115 aa8.65□□□□□ -1.02
PDGFA-201ENST00000354513 MT1HP80294 61 aa8.64□□□□□ -1.03
PDGFA-201ENST00000354513 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.64□□□□□ -1.03
PDGFA-201ENST00000354513 LYRM7Q5U5X0 104 aa8.63□□□□□ -1.03
PDGFA-201ENST00000354513 FSIP2Q5CZC0 6907 aa8.63□□□□□ -1.03
PDGFA-201ENST00000354513 IGLV5-48A0A075B6I7 105 aa8.62□□□□□ -1.03
PDGFA-201ENST00000354513 TEX49A0A1B0GTD5 131 aa8.62□□□□□ -1.03
PDGFA-201ENST00000354513 LST1O00453 97 aa8.61□□□□□ -1.03
PDGFA-201ENST00000354513 DNAL4O96015 105 aa8.61□□□□□ -1.03
PDGFA-201ENST00000354513 PCOTHQ58A44 107 aa8.61□□□□□ -1.03
PDGFA-201ENST00000354513 HRCT1Q6UXD1 115 aa8.61□□□□□ -1.03
PDGFA-201ENST00000354513 CRCT1Q9UGL9 99 aa8.61□□□□□ -1.03
PDGFA-201ENST00000354513 A0A1W2PPM0 123 aa8.6□□□□□ -1.03
PDGFA-201ENST00000354513 TCL1BO95988 128 aa8.6□□□□□ -1.03
PDGFA-201ENST00000354513 C9orf92A6NGG3 77 aa8.59□□□□□ -1.03
PDGFA-201ENST00000354513 TRACP01848 142 aa8.59□□□□□ -1.03
PDGFA-201ENST00000354513 ATXN8Q156A1 80 aa8.59□□□□□ -1.03
PDGFA-201ENST00000354513 OCIAD2Q56VL3 154 aa8.59□□□□□ -1.03
PDGFA-201ENST00000354513 FABP2P12104 132 aa8.58□□□□□ -1.04
PDGFA-201ENST00000354513 LAMTOR3Q9UHA4 124 aa8.58□□□□□ -1.04
PDGFA-201ENST00000354513 LIMD2Q9BT23 127 aa8.57□□□□□ -1.04
PDGFA-201ENST00000354513 FLGP20930 4061 aaPredicted RBP8.57□□□□□ -1.04
PDGFA-201ENST00000354513 TRBV20-1A0A075B6N2 111 aa8.56□□□□□ -1.04
PDGFA-201ENST00000354513 GHRHP01286 108 aa8.56□□□□□ -1.04
PDGFA-201ENST00000354513 PPDPFLQ8WWR9 84 aa8.56□□□□□ -1.04
PDGFA-201ENST00000354513 ORMDL1Q9P0S3 153 aa8.56□□□□□ -1.04
PDGFA-201ENST00000354513 IGLV8-61A0A075B6I0 122 aa8.55□□□□□ -1.04
PDGFA-201ENST00000354513 SMIM29Q86T20 159 aa8.55□□□□□ -1.04
PDGFA-201ENST00000354513 SPCS1Q9Y6A9 102 aa8.54□□□□□ -1.04
PDGFA-201ENST00000354513 F8WEM9 126 aa8.53□□□□□ -1.04
PDGFA-201ENST00000354513 H3BQ85 93 aa8.53□□□□□ -1.04
PDGFA-201ENST00000354513 LORP23490 312 aaPredicted RBP8.53□□□□□ -1.04
PDGFA-201ENST00000354513 CD164Q04900 197 aa8.52□□□□□ -1.05
PDGFA-201ENST00000354513 A0A0G2JQZ4 141 aa8.51□□□□□ -1.05
PDGFA-201ENST00000354513 TMEM256-PLSCR3K7ERE1 68 aa8.51□□□□□ -1.05
PDGFA-201ENST00000354513 BAALC-AS2P0C853 105 aa8.51□□□□□ -1.05
PDGFA-201ENST00000354513 NDUFV3P56181 108 aaKnown RBP8.5□□□□□ -1.05
PDGFA-201ENST00000354513 C9JAW5 83 aa8.49□□□□□ -1.05
PDGFA-201ENST00000354513 H3BMG7 143 aa8.49□□□□□ -1.05
PDGFA-201ENST00000354513 KRTAP10-6P60371 365 aaPredicted RBP8.49□□□□□ -1.05
PDGFA-201ENST00000354513 C1orf195Q5TG92 126 aa8.49□□□□□ -1.05
PDGFA-201ENST00000354513 Q5XG85 94 aa8.49□□□□□ -1.05
PDGFA-201ENST00000354513 K7EP34 96 aa8.47□□□□□ -1.05
PDGFA-201ENST00000354513 UBE2V1Q13404 147 aa8.47□□□□□ -1.05
PDGFA-201ENST00000354513 KRTAP3-3Q9BYR6 98 aa8.46□□□□□ -1.06
PDGFA-201ENST00000354513 KRTAP3-2Q9BYR7 98 aa8.46□□□□□ -1.06
PDGFA-201ENST00000354513 RPL37P61927 97 aaKnown RBP8.45□□□□□ -1.06
PDGFA-201ENST00000354513 A0A1B0GV72 72 aa8.44□□□□□ -1.06
PDGFA-201ENST00000354513 GTF2H5Q6ZYL4 71 aa8.44□□□□□ -1.06
PDGFA-201ENST00000354513 MTURNQ8N3F0 131 aa8.44□□□□□ -1.06
PDGFA-201ENST00000354513 ANKRD29Q8N6D5 301 aa8.44□□□□□ -1.06
PDGFA-201ENST00000354513 Q6JHZ5 121 aa8.43□□□□□ -1.06
PDGFA-201ENST00000354513 H3BT86 120 aa8.41□□□□□ -1.06
PDGFA-201ENST00000354513 IGFL1Q6UW32 110 aa8.41□□□□□ -1.06
PDGFA-201ENST00000354513 RBM3P98179 157 aaKnown RBP8.38□□□□□ -1.07
PDGFA-201ENST00000354513 A0A1B0GV90 55 aa8.36□□□□□ -1.07
PDGFA-201ENST00000354513 JMJD7-PLA2G4BH0Y9G9 81 aa8.36□□□□□ -1.07
PDGFA-201ENST00000354513 PRO0461Q9UI25 63 aa8.36□□□□□ -1.07
PDGFA-201ENST00000354513 SMCPP49901 116 aaPredicted RBP8.35□□□□□ -1.07
PDGFA-201ENST00000354513 DSCR8Q96T75 97 aa8.34□□□□□ -1.07
PDGFA-201ENST00000354513 TRBV7-4A0A0J9YYF1 115 aa8.33□□□□□ -1.08
PDGFA-201ENST00000354513 F8W1H4 67 aa8.31□□□□□ -1.08
PDGFA-201ENST00000354513 M0R2T5 61 aa8.31□□□□□ -1.08
PDGFA-201ENST00000354513 TEN1Q86WV5 123 aa8.31□□□□□ -1.08
PDGFA-201ENST00000354513 OBSCN-AS1Q96MR7 158 aa8.31□□□□□ -1.08
PDGFA-201ENST00000354513 TRBV7-7A0A0K0K1E9 115 aa8.3□□□□□ -1.08
PDGFA-201ENST00000354513 A0A1W2PNM2 257 aa8.3□□□□□ -1.08
PDGFA-201ENST00000354513 Q6Q795 121 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms