RNA–Protein interactions for RNA: ENST00000351986.10

NPM1-202, Transcript of nucleophosmin 1, humanhuman

TSL 1 (best) BASIC

Gene NPM1, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-202ENST00000351986 CNBPP62633 177 aaKnown RBP3.49□□□□□ -1.85
NPM1-202ENST00000351986 TMEM136Q6ZRR5 245 aa3.49□□□□□ -1.85
NPM1-202ENST00000351986 Q6ZSA8 131 aa3.49□□□□□ -1.85
NPM1-202ENST00000351986 SMIM2Q9BVW6 85 aa3.49□□□□□ -1.85
NPM1-202ENST00000351986 CDC42SE2Q9NRR3 84 aa3.49□□□□□ -1.85
NPM1-202ENST00000351986 FCER1GP30273 86 aa3.48□□□□□ -1.85
NPM1-202ENST00000351986 HIGD2BQ4VC39 106 aa3.48□□□□□ -1.85
NPM1-202ENST00000351986 ZC2HC1BQ5TFG8 222 aa3.48□□□□□ -1.85
NPM1-202ENST00000351986 SDIM1Q6ZPB5 146 aa3.48□□□□□ -1.85
NPM1-202ENST00000351986 TYMSOSQ8TAI1 123 aa3.48□□□□□ -1.85
NPM1-202ENST00000351986 UBE2D4Q9Y2X8 147 aa3.48□□□□□ -1.85
NPM1-202ENST00000351986 TRAPPC1Q9Y5R8 145 aa3.48□□□□□ -1.85
NPM1-202ENST00000351986 ABCA13Q86UQ4 5058 aa3.48□□□□□ -1.85
NPM1-202ENST00000351986 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.47□□□□□ -1.85
NPM1-202ENST00000351986 LINC00959A0A1B0GUT2 108 aa3.47□□□□□ -1.85
NPM1-202ENST00000351986 LINC01546A6NGU7 62 aa3.47□□□□□ -1.85
NPM1-202ENST00000351986 ATP5EP56381 51 aaPredicted RBP3.47□□□□□ -1.85
NPM1-202ENST00000351986 WFDC2Q14508 124 aa3.47□□□□□ -1.85
NPM1-202ENST00000351986 C9orf163Q8N9P6 203 aa3.47□□□□□ -1.85
NPM1-202ENST00000351986 NXT2Q9NPJ8 142 aaKnown RBP3.47□□□□□ -1.85
NPM1-202ENST00000351986 SPCS1Q9Y6A9 102 aa3.47□□□□□ -1.85
NPM1-202ENST00000351986 VPS13BQ7Z7G8 4022 aa3.46□□□□□ -1.86
NPM1-202ENST00000351986 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.46□□□□□ -1.86
NPM1-202ENST00000351986 GVQW2A0A096LPI5 108 aaPredicted RBP3.46□□□□□ -1.86
NPM1-202ENST00000351986 FAM168BA1KXE4 195 aa3.46□□□□□ -1.86
NPM1-202ENST00000351986 IGKV2-29A2NJV5 120 aaPredicted RBP3.46□□□□□ -1.86
NPM1-202ENST00000351986 H3BRM9 83 aa3.46□□□□□ -1.86
NPM1-202ENST00000351986 KRTAP10-1P60331 282 aa3.46□□□□□ -1.86
NPM1-202ENST00000351986 SEC11AP67812 179 aa3.46□□□□□ -1.86
NPM1-202ENST00000351986 FP248Q71RG6 208 aaPredicted RBP3.46□□□□□ -1.86
NPM1-202ENST00000351986 Q8N8P6 123 aa3.46□□□□□ -1.86
NPM1-202ENST00000351986 SPANXA2-OT1Q8N9U9 137 aa3.46□□□□□ -1.86
NPM1-202ENST00000351986 A8MUU9 505 aa3.45□□□□□ -1.86
NPM1-202ENST00000351986 IGKCP01834 107 aa3.45□□□□□ -1.86
NPM1-202ENST00000351986 S100A7L2Q5SY68 101 aa3.45□□□□□ -1.86
NPM1-202ENST00000351986 ATP11AUNQ6ZP68 121 aa3.45□□□□□ -1.86
NPM1-202ENST00000351986 C5orf38Q86SI9 138 aa3.45□□□□□ -1.86
NPM1-202ENST00000351986 RETNLBQ9BQ08 111 aa3.45□□□□□ -1.86
NPM1-202ENST00000351986 SRRM2Q9UQ35 2752 aaKnown RBP3.44□□□□□ -1.86
NPM1-202ENST00000351986 A0A0B4J2C4 111 aa3.44□□□□□ -1.86
NPM1-202ENST00000351986 LOC107984156A0A0G2JMH3 177 aa3.44□□□□□ -1.86
NPM1-202ENST00000351986 hADV29S1A0JD25 119 aa3.44□□□□□ -1.86
NPM1-202ENST00000351986 IFI27P40305 119 aaPredicted RBP3.44□□□□□ -1.86
NPM1-202ENST00000351986 XCL1P47992 114 aa3.44□□□□□ -1.86
NPM1-202ENST00000351986 C2orf91Q6ZV80 131 aa3.44□□□□□ -1.86
NPM1-202ENST00000351986 ARL17AQ8IVW1 177 aa3.44□□□□□ -1.86
NPM1-202ENST00000351986 RPS10P5Q9NQ39 176 aa3.44□□□□□ -1.86
NPM1-202ENST00000351986 MYCBP2O75592 4640 aa3.43□□□□□ -1.86
NPM1-202ENST00000351986 IGLV10-54A0A075B6I4 117 aa3.43□□□□□ -1.86
NPM1-202ENST00000351986 IGIPA6NJ69 53 aa3.43□□□□□ -1.86
NPM1-202ENST00000351986 ATOX1O00244 68 aa3.43□□□□□ -1.86
NPM1-202ENST00000351986 IGLC3P0DOY3 106 aa3.43□□□□□ -1.86
NPM1-202ENST00000351986 RPL28P46779 137 aaKnown RBP3.43□□□□□ -1.86
NPM1-202ENST00000351986 DSCR10P59022 87 aa3.43□□□□□ -1.86
NPM1-202ENST00000351986 RPL39P62891 51 aaKnown RBP3.43□□□□□ -1.86
NPM1-202ENST00000351986 RBM3P98179 157 aaKnown RBP3.43□□□□□ -1.86
NPM1-202ENST00000351986 CLPSL2Q6UWE3 100 aa3.43□□□□□ -1.86
NPM1-202ENST00000351986 KRTAP5-5Q701N2 237 aaPredicted RBP3.43□□□□□ -1.86
NPM1-202ENST00000351986 Q8NDZ9 215 aa3.43□□□□□ -1.86
NPM1-202ENST00000351986 PPDPFLQ8WWR9 84 aa3.43□□□□□ -1.86
NPM1-202ENST00000351986 AMELXQ99217 191 aa3.43□□□□□ -1.86
NPM1-202ENST00000351986 IGHV3-64A0A075B6Q5 118 aa3.42□□□□□ -1.86
NPM1-202ENST00000351986 SPATA45Q537H7 98 aa3.42□□□□□ -1.86
NPM1-202ENST00000351986 Q5W150 140 aa3.42□□□□□ -1.86
NPM1-202ENST00000351986 DEFB104AQ8WTQ1 72 aa3.42□□□□□ -1.86
NPM1-202ENST00000351986 TMEM141Q96I45 108 aa3.42□□□□□ -1.86
NPM1-202ENST00000351986 LINC00474Q9P2X8 69 aa3.42□□□□□ -1.86
NPM1-202ENST00000351986 TRBV7-7A0A0K0K1E9 115 aa3.41□□□□□ -1.86
NPM1-202ENST00000351986 A0A1W2PPM0 123 aa3.41□□□□□ -1.86
NPM1-202ENST00000351986 A6NN06 94 aa3.41□□□□□ -1.86
NPM1-202ENST00000351986 UBE2D1P51668 147 aa3.41□□□□□ -1.86
NPM1-202ENST00000351986 FAM229BQ4G0N7 80 aa3.41□□□□□ -1.86
NPM1-202ENST00000351986 BVES-AS1Q5T3Y7 98 aa3.41□□□□□ -1.86
NPM1-202ENST00000351986 C1orf64Q8NEQ6 169 aa3.41□□□□□ -1.86
NPM1-202ENST00000351986 A0A096LNJ9 63 aa3.4□□□□□ -1.87
NPM1-202ENST00000351986 IGKV3OR2-268A0A0C4DH90 116 aa3.4□□□□□ -1.87
NPM1-202ENST00000351986 hDV103S1A0JD37 113 aa3.4□□□□□ -1.87
NPM1-202ENST00000351986 KRTDAPP60985 99 aa3.4□□□□□ -1.87
NPM1-202ENST00000351986 ASB16-AS1Q495Z4 193 aa3.4□□□□□ -1.87
NPM1-202ENST00000351986 C18orf32Q8TCD1 76 aa3.4□□□□□ -1.87
NPM1-202ENST00000351986 SPACA4Q8TDM5 124 aa3.4□□□□□ -1.87
NPM1-202ENST00000351986 NHP2Q9NX24 153 aaKnown RBP3.4□□□□□ -1.87
NPM1-202ENST00000351986 MRPL35Q9NZE8 188 aaKnown RBP3.4□□□□□ -1.87
NPM1-202ENST00000351986 IGLV4-69A0A075B6H9 119 aa3.39□□□□□ -1.87
NPM1-202ENST00000351986 DEFB116Q30KQ4 102 aa3.39□□□□□ -1.87
NPM1-202ENST00000351986 ETDBQ3ZM63 59 aa3.39□□□□□ -1.87
NPM1-202ENST00000351986 Q5VSD8 79 aa3.39□□□□□ -1.87
NPM1-202ENST00000351986 PLAC8Q9NZF1 115 aa3.39□□□□□ -1.87
NPM1-202ENST00000351986 IGKV2D-26A0A0A0MRZ7 120 aa3.38□□□□□ -1.87
NPM1-202ENST00000351986 TRBV30A0A0K0K1B3 111 aa3.38□□□□□ -1.87
NPM1-202ENST00000351986 H3BPC8 53 aa3.38□□□□□ -1.87
NPM1-202ENST00000351986 H3BQ85 93 aa3.38□□□□□ -1.87
NPM1-202ENST00000351986 H3BUT2 72 aa3.38□□□□□ -1.87
NPM1-202ENST00000351986 NUPR1O60356 82 aa3.38□□□□□ -1.87
NPM1-202ENST00000351986 KRTAP10-4P60372 401 aaPredicted RBP3.38□□□□□ -1.87
NPM1-202ENST00000351986 Q8IZM0 81 aa3.38□□□□□ -1.87
NPM1-202ENST00000351986 HERC1Q15751 4861 aa3.38□□□□□ -1.87
NPM1-202ENST00000351986 TRAV7A0A075B6U4 112 aa3.37□□□□□ -1.87
NPM1-202ENST00000351986 NDUFA1O15239 70 aa3.37□□□□□ -1.87
NPM1-202ENST00000351986 FXYD2P54710 66 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms