RNA–Protein interactions for RNA: ENST00000344425.7

KCNQ2-201, Transcript of potassium voltage-gated channel subfamily Q member 2, humanhuman

TSL 1 (best) BASIC

Gene KCNQ2, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ2-201ENST00000344425 Q6Q795 121 aa10.48□□□□□ -0.73
KCNQ2-201ENST00000344425 ATP11AUNQ6ZP68 121 aa10.48□□□□□ -0.73
KCNQ2-201ENST00000344425 PCP2Q8IVA1 136 aa10.48□□□□□ -0.73
KCNQ2-201ENST00000344425 MUSTN1Q8IVN3 82 aa10.48□□□□□ -0.73
KCNQ2-201ENST00000344425 SMIM11BQ8TCY0 68 aa10.46□□□□□ -0.74
KCNQ2-201ENST00000344425 VAMP3Q15836 100 aa10.44□□□□□ -0.74
KCNQ2-201ENST00000344425 Q6JHZ5 121 aa10.44□□□□□ -0.74
KCNQ2-201ENST00000344425 C20orf202A1L168 122 aa10.43□□□□□ -0.74
KCNQ2-201ENST00000344425 Q75L30 129 aa10.42□□□□□ -0.74
KCNQ2-201ENST00000344425 ANKRD39Q53RE8 183 aa10.41□□□□□ -0.74
KCNQ2-201ENST00000344425 OBSCN-AS1Q96MR7 158 aa10.41□□□□□ -0.74
KCNQ2-201ENST00000344425 TRBV7-7A0A0K0K1E9 115 aa10.41□□□□□ -0.74
KCNQ2-201ENST00000344425 CLEC2BQ92478 149 aa10.41□□□□□ -0.74
KCNQ2-201ENST00000344425 ATOH7Q8N100 152 aa10.4□□□□□ -0.75
KCNQ2-201ENST00000344425 LINC00575Q6W349 94 aa10.39□□□□□ -0.75
KCNQ2-201ENST00000344425 IGFL1Q6UW32 110 aa10.38□□□□□ -0.75
KCNQ2-201ENST00000344425 Q6ZQY7 126 aa10.38□□□□□ -0.75
KCNQ2-201ENST00000344425 hADV29S1A0JD25 119 aa10.37□□□□□ -0.75
KCNQ2-201ENST00000344425 OCIAD2Q56VL3 154 aa10.36□□□□□ -0.75
KCNQ2-201ENST00000344425 CFC1P0CG37 223 aa10.35□□□□□ -0.75
KCNQ2-201ENST00000344425 TMA7Q9Y2S6 64 aaKnown RBP10.33□□□□□ -0.76
KCNQ2-201ENST00000344425 LST1O00453 97 aa10.32□□□□□ -0.76
KCNQ2-201ENST00000344425 Q96NJ1 140 aa10.32□□□□□ -0.76
KCNQ2-201ENST00000344425 SCGB1D1O95968 90 aa10.31□□□□□ -0.76
KCNQ2-201ENST00000344425 KRTAP9-7A8MTY7 169 aa10.3□□□□□ -0.76
KCNQ2-201ENST00000344425 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.3□□□□□ -0.76
KCNQ2-201ENST00000344425 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.29□□□□□ -0.76
KCNQ2-201ENST00000344425 PPDPFLQ8WWR9 84 aa10.28□□□□□ -0.76
KCNQ2-201ENST00000344425 SNHG12Q9BXW3 62 aa10.28□□□□□ -0.76
KCNQ2-201ENST00000344425 TRBV20-1A0A075B6N2 111 aa10.26□□□□□ -0.77
KCNQ2-201ENST00000344425 HSBP1L1C9JCN9 74 aa10.26□□□□□ -0.77
KCNQ2-201ENST00000344425 KRTAP9-8Q9BYQ0 159 aa10.26□□□□□ -0.77
KCNQ2-201ENST00000344425 USH2AO75445 5202 aa10.25□□□□□ -0.77
KCNQ2-201ENST00000344425 SS18L2Q9UHA2 77 aa10.24□□□□□ -0.77
KCNQ2-201ENST00000344425 C20orf166-AS1Q96NR2 134 aa10.24□□□□□ -0.77
KCNQ2-201ENST00000344425 BVES-AS1Q5T3Y7 98 aa10.22□□□□□ -0.77
KCNQ2-201ENST00000344425 SSPOA2VEC9 5147 aa10.21□□□□□ -0.77
KCNQ2-201ENST00000344425 A8MUU9 505 aa10.21□□□□□ -0.78
KCNQ2-201ENST00000344425 H3BUT2 72 aa10.21□□□□□ -0.78
KCNQ2-201ENST00000344425 TEN1Q86WV5 123 aa10.16□□□□□ -0.78
KCNQ2-201ENST00000344425 PYY3Q5JQD4 70 aa10.15□□□□□ -0.79
KCNQ2-201ENST00000344425 C12orf57Q99622 126 aa10.15□□□□□ -0.79
KCNQ2-201ENST00000344425 PAM16Q9Y3D7 125 aa10.15□□□□□ -0.79
KCNQ2-201ENST00000344425 SPATA45Q537H7 98 aa10.14□□□□□ -0.79
KCNQ2-201ENST00000344425 VAMP8Q9BV40 100 aa10.14□□□□□ -0.79
KCNQ2-201ENST00000344425 SNCGO76070 127 aa10.13□□□□□ -0.79
KCNQ2-201ENST00000344425 COX8AP10176 69 aa10.13□□□□□ -0.79
KCNQ2-201ENST00000344425 C14orf144Q96I85 54 aa10.11□□□□□ -0.79
KCNQ2-201ENST00000344425 A0A087WSZ3 146 aa10.09□□□□□ -0.79
KCNQ2-201ENST00000344425 FAM236DA0A1B0GTK5 79 aa10.09□□□□□ -0.79
KCNQ2-201ENST00000344425 FAM236CP0DP71 79 aa10.09□□□□□ -0.79
KCNQ2-201ENST00000344425 HIST1H4GQ99525 98 aa10.09□□□□□ -0.79
KCNQ2-201ENST00000344425 DLEU1O43261 78 aa10.08□□□□□ -0.8
KCNQ2-201ENST00000344425 NDUFV3P56181 108 aaKnown RBP10.08□□□□□ -0.8
KCNQ2-201ENST00000344425 MT2AP02795 61 aa10.07□□□□□ -0.8
KCNQ2-201ENST00000344425 DSCR10P59022 87 aa10.07□□□□□ -0.8
KCNQ2-201ENST00000344425 FCGBPQ9Y6R7 5405 aaPredicted RBP10.06□□□□□ -0.8
KCNQ2-201ENST00000344425 H0YGX0 51 aa10.04□□□□□ -0.8
KCNQ2-201ENST00000344425 SIGMAR1Q99720 223 aa10.03□□□□□ -0.8
KCNQ2-201ENST00000344425 RBM12B-AS1Q9P1G2 102 aa10.03□□□□□ -0.8
KCNQ2-201ENST00000344425 H3BMG7 143 aa10.02□□□□□ -0.81
KCNQ2-201ENST00000344425 GHRHP01286 108 aa10.02□□□□□ -0.81
KCNQ2-201ENST00000344425 LINC00313P59037 77 aa10.02□□□□□ -0.81
KCNQ2-201ENST00000344425 KRTAP16-1A8MUX0 517 aa10□□□□□ -0.81
KCNQ2-201ENST00000344425 C2orf91Q6ZV80 131 aa10□□□□□ -0.81
KCNQ2-201ENST00000344425 RAB37Q96AX2 223 aa10□□□□□ -0.81
KCNQ2-201ENST00000344425 HIGD1BQ9P298 99 aa10□□□□□ -0.81
KCNQ2-201ENST00000344425 KRTAP19-1Q8IUB9 90 aa9.99□□□□□ -0.81
KCNQ2-201ENST00000344425 LCE2BO14633 110 aa9.99□□□□□ -0.81
KCNQ2-201ENST00000344425 MT1FP04733 61 aa9.99□□□□□ -0.81
KCNQ2-201ENST00000344425 KRTAP10-10P60014 251 aa9.99□□□□□ -0.81
KCNQ2-201ENST00000344425 FAM218AQ96MZ4 157 aa9.98□□□□□ -0.81
KCNQ2-201ENST00000344425 FABP2P12104 132 aa9.97□□□□□ -0.81
KCNQ2-201ENST00000344425 MPLKIPQ8TAP9 179 aa9.96□□□□□ -0.82
KCNQ2-201ENST00000344425 KRTAP9-3Q9BYQ3 159 aa9.96□□□□□ -0.82
KCNQ2-201ENST00000344425 IGKV4-1P06312 121 aa9.95□□□□□ -0.82
KCNQ2-201ENST00000344425 A0A1B0GX51 115 aa9.94□□□□□ -0.82
KCNQ2-201ENST00000344425 A0A1W2PNM2 257 aa9.94□□□□□ -0.82
KCNQ2-201ENST00000344425 HRES1P13985 223 aa9.94□□□□□ -0.82
KCNQ2-201ENST00000344425 A0A0B4J2C4 111 aa9.93□□□□□ -0.82
KCNQ2-201ENST00000344425 LOC105371267A0A1B0GV96 52 aa9.92□□□□□ -0.82
KCNQ2-201ENST00000344425 CEND1Q8N111 149 aa9.9□□□□□ -0.82
KCNQ2-201ENST00000344425 UQCR10Q9UDW1 63 aa9.9□□□□□ -0.82
KCNQ2-201ENST00000344425 SMIM6P0DI80 62 aa9.9□□□□□ -0.83
KCNQ2-201ENST00000344425 TRBV7-4A0A0J9YYF1 115 aa9.89□□□□□ -0.83
KCNQ2-201ENST00000344425 NOTCH2NLQ7Z3S9 236 aa9.88□□□□□ -0.83
KCNQ2-201ENST00000344425 ANKRD29Q8N6D5 301 aa9.88□□□□□ -0.83
KCNQ2-201ENST00000344425 MACF1Q9UPN3 7388 aaKnown RBP9.87□□□□□ -0.83
KCNQ2-201ENST00000344425 MTURNQ8N3F0 131 aa9.87□□□□□ -0.83
KCNQ2-201ENST00000344425 LINC00846Q9NV44 126 aa9.87□□□□□ -0.83
KCNQ2-201ENST00000344425 FXYD2P54710 66 aa9.85□□□□□ -0.83
KCNQ2-201ENST00000344425 HSD52Q0P140 79 aa9.85□□□□□ -0.83
KCNQ2-201ENST00000344425 IGHV6-1A0A0B4J1U7 121 aa9.83□□□□□ -0.84
KCNQ2-201ENST00000344425 TMEM238LA0A1B0GVL6 79 aa9.83□□□□□ -0.84
KCNQ2-201ENST00000344425 A6NJY4 79 aa9.83□□□□□ -0.84
KCNQ2-201ENST00000344425 DEFB116Q30KQ4 102 aa9.83□□□□□ -0.84
KCNQ2-201ENST00000344425 PRO1854Q9UHT4 67 aa9.83□□□□□ -0.84
KCNQ2-201ENST00000344425 LINC00472Q9H8W2 130 aa9.82□□□□□ -0.84
KCNQ2-201ENST00000344425 SYNE2Q8WXH0 6885 aaKnown RBP9.82□□□□□ -0.84
KCNQ2-201ENST00000344425 H3BQ85 93 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms