RNA–Protein interactions for RNA: ENST00000344337.10

KPNA1-201, Transcript of karyopherin subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA1, Length 6,830 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-201ENST00000344337 C15orf56Q8N910 161 aa5.12□□□□□ -1.59
KPNA1-201ENST00000344337 Q8NBF4 154 aa5.12□□□□□ -1.59
KPNA1-201ENST00000344337 LOC110117498A0A087WWA1 95 aa5.11□□□□□ -1.59
KPNA1-201ENST00000344337 IGFL1Q6UW32 110 aa5.09□□□□□ -1.59
KPNA1-201ENST00000344337 TRAV22A0A0B4J277 110 aa5.09□□□□□ -1.59
KPNA1-201ENST00000344337 KRTAP10-11P60412 298 aa5.09□□□□□ -1.59
KPNA1-201ENST00000344337 LINC00528Q8N1L1 170 aa5.09□□□□□ -1.59
KPNA1-201ENST00000344337 C16orf95Q9H693 158 aa5.09□□□□□ -1.59
KPNA1-201ENST00000344337 A0A1W2PNM2 257 aa5.09□□□□□ -1.6
KPNA1-201ENST00000344337 C14orf177Q52M58 125 aa5.08□□□□□ -1.6
KPNA1-201ENST00000344337 Q5XG85 94 aa5.08□□□□□ -1.6
KPNA1-201ENST00000344337 IGLV5-52A0A0A0MRZ9 124 aa5.08□□□□□ -1.6
KPNA1-201ENST00000344337 OTOGQ6ZRI0 2925 aa5.07□□□□□ -1.6
KPNA1-201ENST00000344337 FP248Q71RG6 208 aaPredicted RBP5.07□□□□□ -1.6
KPNA1-201ENST00000344337 COA5Q86WW8 74 aa5.06□□□□□ -1.6
KPNA1-201ENST00000344337 KLKP1Q107X0 134 aa5.06□□□□□ -1.6
KPNA1-201ENST00000344337 TRRAPQ9Y4A5 3859 aa5.06□□□□□ -1.6
KPNA1-201ENST00000344337 KRTAP24-1Q3LI83 254 aa5.06□□□□□ -1.6
KPNA1-201ENST00000344337 MDFIQ99750 246 aa5.06□□□□□ -1.6
KPNA1-201ENST00000344337 C7orf65Q6ZTY9 151 aa5.05□□□□□ -1.6
KPNA1-201ENST00000344337 A0A1B0GU69 56 aa5.05□□□□□ -1.6
KPNA1-201ENST00000344337 ATP11AUNQ6ZP68 121 aa5.05□□□□□ -1.6
KPNA1-201ENST00000344337 KLK9Q2XQG4 91 aa5.04□□□□□ -1.6
KPNA1-201ENST00000344337 PRR26Q8N8Z3 221 aa5.03□□□□□ -1.6
KPNA1-201ENST00000344337 IGLV1-50A0A075B6I6 118 aa5.03□□□□□ -1.6
KPNA1-201ENST00000344337 DSCR10P59022 87 aa5.03□□□□□ -1.6
KPNA1-201ENST00000344337 PRR15Q8IV56 129 aa5.02□□□□□ -1.61
KPNA1-201ENST00000344337 LIMD2Q9BT23 127 aa5.01□□□□□ -1.61
KPNA1-201ENST00000344337 RTL8CO15255 209 aa5.01□□□□□ -1.61
KPNA1-201ENST00000344337 ANK2Q01484 3957 aa5□□□□□ -1.61
KPNA1-201ENST00000344337 PRR34Q9NV39 138 aa5□□□□□ -1.61
KPNA1-201ENST00000344337 KCNQ1DNQ9H478 68 aa5□□□□□ -1.61
KPNA1-201ENST00000344337 A8MU10 97 aa5□□□□□ -1.61
KPNA1-201ENST00000344337 KRTAP1-3Q8IUG1 177 aa4.99□□□□□ -1.61
KPNA1-201ENST00000344337 PRAC1Q96KF2 57 aa4.99□□□□□ -1.61
KPNA1-201ENST00000344337 TENM1Q9UKZ4 2725 aa4.99□□□□□ -1.61
KPNA1-201ENST00000344337 GVQW2A0A096LPI5 108 aaPredicted RBP4.99□□□□□ -1.61
KPNA1-201ENST00000344337 OCR1Q9BZK8 76 aa4.99□□□□□ -1.61
KPNA1-201ENST00000344337 TENM2Q9NT68 2774 aa4.98□□□□□ -1.61
KPNA1-201ENST00000344337 ANK3Q12955 4377 aaKnown RBP4.98□□□□□ -1.61
KPNA1-201ENST00000344337 TENM3Q9P273 2699 aa4.98□□□□□ -1.61
KPNA1-201ENST00000344337 C9orf92A6NGG3 77 aa4.98□□□□□ -1.61
KPNA1-201ENST00000344337 CRIPTQ9P021 101 aa4.98□□□□□ -1.61
KPNA1-201ENST00000344337 C16orf90A8MZG2 172 aa4.97□□□□□ -1.61
KPNA1-201ENST00000344337 SMR3BP02814 79 aaPredicted RBP4.97□□□□□ -1.61
KPNA1-201ENST00000344337 A8MWP4 228 aa4.97□□□□□ -1.61
KPNA1-201ENST00000344337 LINC00612Q8N6U2 182 aa4.96□□□□□ -1.61
KPNA1-201ENST00000344337 ZNF706Q9Y5V0 76 aaPredicted RBP4.96□□□□□ -1.61
KPNA1-201ENST00000344337 Q96NJ1 140 aa4.96□□□□□ -1.62
KPNA1-201ENST00000344337 TENM4Q6N022 2769 aa4.96□□□□□ -1.62
KPNA1-201ENST00000344337 Q8N1X5 172 aa4.96□□□□□ -1.62
KPNA1-201ENST00000344337 LINC01600Q96MT4 127 aa4.96□□□□□ -1.62
KPNA1-201ENST00000344337 LINC00313P59037 77 aa4.95□□□□□ -1.62
KPNA1-201ENST00000344337 LYSTQ99698 3801 aa4.95□□□□□ -1.62
KPNA1-201ENST00000344337 SRRM2Q9UQ35 2752 aaKnown RBP4.95□□□□□ -1.62
KPNA1-201ENST00000344337 C1orf134Q5TEV5 83 aa4.94□□□□□ -1.62
KPNA1-201ENST00000344337 K7ERS5 55 aa4.94□□□□□ -1.62
KPNA1-201ENST00000344337 ACYP2P14621 99 aa4.94□□□□□ -1.62
KPNA1-201ENST00000344337 SSBP3-AS1Q7Z2R9 100 aa4.93□□□□□ -1.62
KPNA1-201ENST00000344337 KRTAP1-1Q07627 177 aa4.93□□□□□ -1.62
KPNA1-201ENST00000344337 K7EIL1 84 aa4.93□□□□□ -1.62
KPNA1-201ENST00000344337 NUPR2A6NF83 97 aa4.92□□□□□ -1.62
KPNA1-201ENST00000344337 COL7A1Q02388 2944 aa4.92□□□□□ -1.62
KPNA1-201ENST00000344337 BCE1O60756 84 aa4.92□□□□□ -1.62
KPNA1-201ENST00000344337 MRPL34Q9BQ48 92 aaKnown RBP4.92□□□□□ -1.62
KPNA1-201ENST00000344337 C8orf17Q9NRJ1 99 aa4.92□□□□□ -1.62
KPNA1-201ENST00000344337 LOC101927531A0A1B0GV80 90 aa4.91□□□□□ -1.62
KPNA1-201ENST00000344337 A0A0D9SG42 100 aa4.91□□□□□ -1.62
KPNA1-201ENST00000344337 NBDYA0A0U1RRE5 68 aa4.91□□□□□ -1.62
KPNA1-201ENST00000344337 PSORS1C2Q9UIG4 136 aa4.89□□□□□ -1.63
KPNA1-201ENST00000344337 CNBPP62633 177 aaKnown RBP4.89□□□□□ -1.63
KPNA1-201ENST00000344337 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.88□□□□□ -1.63
KPNA1-201ENST00000344337 SPINK7P58062 85 aa4.88□□□□□ -1.63
KPNA1-201ENST00000344337 TYMSOSQ8TAI1 123 aa4.88□□□□□ -1.63
KPNA1-201ENST00000344337 Q8N9P0 234 aaPredicted RBP4.87□□□□□ -1.63
KPNA1-201ENST00000344337 C9orf163Q8N9P6 203 aa4.87□□□□□ -1.63
KPNA1-201ENST00000344337 C8orf87E5RJ46 101 aa4.87□□□□□ -1.63
KPNA1-201ENST00000344337 SPINT4Q6UDR6 99 aa4.87□□□□□ -1.63
KPNA1-201ENST00000344337 PLA2G1BP04054 148 aaKnown RBP4.87□□□□□ -1.63
KPNA1-201ENST00000344337 RBM12B-AS1Q9P1G2 102 aa4.87□□□□□ -1.63
KPNA1-201ENST00000344337 IGLV5-48A0A075B6I7 105 aa4.86□□□□□ -1.63
KPNA1-201ENST00000344337 TGP01266 2768 aa4.86□□□□□ -1.63
KPNA1-201ENST00000344337 KTN1-AS1Q86SY8 53 aa4.86□□□□□ -1.63
KPNA1-201ENST00000344337 TP53AIP1Q9HCN2 124 aa4.86□□□□□ -1.63
KPNA1-201ENST00000344337 A0A1B0GVX0 72 aa4.86□□□□□ -1.63
KPNA1-201ENST00000344337 MIR22HGQ0VDD5 57 aa4.86□□□□□ -1.63
KPNA1-201ENST00000344337 CD164Q04900 197 aa4.85□□□□□ -1.63
KPNA1-201ENST00000344337 Q5VV11 94 aa4.84□□□□□ -1.63
KPNA1-201ENST00000344337 KRTAP1-5Q9BYS1 174 aa4.84□□□□□ -1.63
KPNA1-201ENST00000344337 H3BNG1 76 aa4.84□□□□□ -1.63
KPNA1-201ENST00000344337 WIPF1O43516 503 aa4.84□□□□□ -1.63
KPNA1-201ENST00000344337 APLNQ9ULZ1 77 aa4.84□□□□□ -1.64
KPNA1-201ENST00000344337 PANO1I0J062 215 aa4.83□□□□□ -1.64
KPNA1-201ENST00000344337 F8WDY8 70 aa4.81□□□□□ -1.64
KPNA1-201ENST00000344337 UQCR11O14957 56 aa4.81□□□□□ -1.64
KPNA1-201ENST00000344337 LINC01554Q52M75 96 aa4.81□□□□□ -1.64
KPNA1-201ENST00000344337 A0A087X002 238 aa4.81□□□□□ -1.64
KPNA1-201ENST00000344337 Q1T7F1 81 aa4.81□□□□□ -1.64
KPNA1-201ENST00000344337 NOTCH2NLQ7Z3S9 236 aa4.81□□□□□ -1.64
KPNA1-201ENST00000344337 KRTAP11-1Q8IUC1 163 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms