RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 NBDYA0A0U1RRE5 68 aa13.37□□□□□ -0.27
CCDC38-201ENST00000344280 OCR1Q9BZK8 76 aa13.37□□□□□ -0.27
CCDC38-201ENST00000344280 F8WEM9 126 aa13.36□□□□□ -0.27
CCDC38-201ENST00000344280 PRKDCP78527 4128 aaKnown RBP13.36□□□□□ -0.27
CCDC38-201ENST00000344280 PANO1I0J062 215 aa13.36□□□□□ -0.27
CCDC38-201ENST00000344280 DSCR10P59022 87 aa13.36□□□□□ -0.27
CCDC38-201ENST00000344280 C9orf163Q8N9P6 203 aa13.36□□□□□ -0.27
CCDC38-201ENST00000344280 HRCT1Q6UXD1 115 aa13.35□□□□□ -0.27
CCDC38-201ENST00000344280 Q6ZRN7 208 aaPredicted RBP13.33□□□□□ -0.28
CCDC38-201ENST00000344280 FAM236DA0A1B0GTK5 79 aa13.33□□□□□ -0.28
CCDC38-201ENST00000344280 FAM236CP0DP71 79 aa13.33□□□□□ -0.28
CCDC38-201ENST00000344280 K7EQZ3 153 aa13.32□□□□□ -0.28
CCDC38-201ENST00000344280 TMEM254Q8TBM7 123 aa13.32□□□□□ -0.28
CCDC38-201ENST00000344280 SERP1Q9Y6X1 66 aa13.32□□□□□ -0.28
CCDC38-201ENST00000344280 DEFB116Q30KQ4 102 aa13.29□□□□□ -0.28
CCDC38-201ENST00000344280 IGLV8-61A0A075B6I0 122 aa13.28□□□□□ -0.28
CCDC38-201ENST00000344280 NUPR2A6NF83 97 aa13.28□□□□□ -0.28
CCDC38-201ENST00000344280 UBE2AP49459 152 aa13.28□□□□□ -0.28
CCDC38-201ENST00000344280 FAM30AQ9NZY2 134 aa13.27□□□□□ -0.29
CCDC38-201ENST00000344280 A0A087WSZ3 146 aa13.26□□□□□ -0.29
CCDC38-201ENST00000344280 VPS13DQ5THJ4 4388 aa13.25□□□□□ -0.29
CCDC38-201ENST00000344280 KMT2AQ03164 3969 aa13.25□□□□□ -0.29
CCDC38-201ENST00000344280 H0Y9J4 135 aa13.23□□□□□ -0.29
CCDC38-201ENST00000344280 PRO0628Q9UI54 55 aa13.23□□□□□ -0.29
CCDC38-201ENST00000344280 A0A0U1RQV1 116 aa13.22□□□□□ -0.29
CCDC38-201ENST00000344280 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.21□□□□□ -0.29
CCDC38-201ENST00000344280 HECTD4Q9Y4D8 3996 aa13.21□□□□□ -0.3
CCDC38-201ENST00000344280 SPRR1BP22528 89 aa13.2□□□□□ -0.3
CCDC38-201ENST00000344280 NDUFC1O43677 76 aa13.19□□□□□ -0.3
CCDC38-201ENST00000344280 LINC00474Q9P2X8 69 aa13.18□□□□□ -0.3
CCDC38-201ENST00000344280 MEGF8Q7Z7M0 2845 aa13.17□□□□□ -0.3
CCDC38-201ENST00000344280 SMIM26A0A096LP01 95 aa13.16□□□□□ -0.3
CCDC38-201ENST00000344280 DNAH2Q9P225 4427 aa13.16□□□□□ -0.3
CCDC38-201ENST00000344280 RPL37AP61513 92 aaKnown RBP13.16□□□□□ -0.3
CCDC38-201ENST00000344280 KRTAP13-1Q8IUC0 172 aa13.16□□□□□ -0.3
CCDC38-201ENST00000344280 SPACA4Q8TDM5 124 aa13.15□□□□□ -0.3
CCDC38-201ENST00000344280 HCG22E2RYF7 251 aa13.14□□□□□ -0.31
CCDC38-201ENST00000344280 ATP5EP56381 51 aaPredicted RBP13.13□□□□□ -0.31
CCDC38-201ENST00000344280 PKIGQ9Y2B9 76 aa13.13□□□□□ -0.31
CCDC38-201ENST00000344280 A0A087WTM6 91 aa13.12□□□□□ -0.31
CCDC38-201ENST00000344280 FRAS1Q86XX4 4008 aa13.12□□□□□ -0.31
CCDC38-201ENST00000344280 LCE6AA0A183 80 aa13.1□□□□□ -0.31
CCDC38-201ENST00000344280 LINC00336Q6ZUF6 198 aa13.1□□□□□ -0.31
CCDC38-201ENST00000344280 DNHD1Q96M86 4753 aa13.1□□□□□ -0.31
CCDC38-201ENST00000344280 WFDC13Q8IUB5 93 aa13.09□□□□□ -0.31
CCDC38-201ENST00000344280 FP248Q71RG6 208 aaPredicted RBP13.05□□□□□ -0.32
CCDC38-201ENST00000344280 TGP01266 2768 aa13.05□□□□□ -0.32
CCDC38-201ENST00000344280 LINC00472Q9H8W2 130 aa13.04□□□□□ -0.32
CCDC38-201ENST00000344280 RTL8CO15255 209 aa13.03□□□□□ -0.32
CCDC38-201ENST00000344280 FBN3Q75N90 2809 aa13.02□□□□□ -0.32
CCDC38-201ENST00000344280 DNAH17Q9UFH2 4485 aa13.02□□□□□ -0.33
CCDC38-201ENST00000344280 IGLV9-49A0A0B4J1Y8 123 aa13.01□□□□□ -0.33
CCDC38-201ENST00000344280 Q6ZR54 194 aa13.01□□□□□ -0.33
CCDC38-201ENST00000344280 DNAH8Q96JB1 4490 aa13.01□□□□□ -0.33
CCDC38-201ENST00000344280 ZCCHC13Q8WW36 166 aaKnown RBP13□□□□□ -0.33
CCDC38-201ENST00000344280 KRTAP29-1A8MX34 341 aaPredicted RBP12.99□□□□□ -0.33
CCDC38-201ENST00000344280 PRR15Q8IV56 129 aa12.99□□□□□ -0.33
CCDC38-201ENST00000344280 PSORS1C2Q9UIG4 136 aa12.97□□□□□ -0.33
CCDC38-201ENST00000344280 A8MWP4 228 aa12.96□□□□□ -0.34
CCDC38-201ENST00000344280 IGLV5-52A0A0A0MRZ9 124 aa12.93□□□□□ -0.34
CCDC38-201ENST00000344280 FAM229BQ4G0N7 80 aa12.93□□□□□ -0.34
CCDC38-201ENST00000344280 ANAPC11Q9NYG5 84 aa12.93□□□□□ -0.34
CCDC38-201ENST00000344280 LINC00483Q53H64 154 aa12.92□□□□□ -0.34
CCDC38-201ENST00000344280 CASC2Q6XLA1 102 aa12.92□□□□□ -0.34
CCDC38-201ENST00000344280 PLAC8Q9NZF1 115 aa12.91□□□□□ -0.34
CCDC38-201ENST00000344280 DNAH6Q9C0G6 4158 aa12.9□□□□□ -0.34
CCDC38-201ENST00000344280 Q96NJ1 140 aa12.89□□□□□ -0.35
CCDC38-201ENST00000344280 WWC2-AS2Q96NR7 200 aa12.88□□□□□ -0.35
CCDC38-201ENST00000344280 MOBPQ13875 183 aa12.87□□□□□ -0.35
CCDC38-201ENST00000344280 C1orf134Q5TEV5 83 aa12.86□□□□□ -0.35
CCDC38-201ENST00000344280 ZNF861PO60384 105 aa12.85□□□□□ -0.35
CCDC38-201ENST00000344280 MMP24-AS1A0A0U1RRL7 71 aa12.84□□□□□ -0.35
CCDC38-201ENST00000344280 LINC00208Q96KT6 92 aa12.83□□□□□ -0.36
CCDC38-201ENST00000344280 PRR4Q16378 134 aa12.82□□□□□ -0.36
CCDC38-201ENST00000344280 LY6G6CO95867 125 aa12.82□□□□□ -0.36
CCDC38-201ENST00000344280 ZNF706Q9Y5V0 76 aaPredicted RBP12.82□□□□□ -0.36
CCDC38-201ENST00000344280 MP68P56378 58 aa12.81□□□□□ -0.36
CCDC38-201ENST00000344280 DNAH5Q8TE73 4624 aa12.81□□□□□ -0.36
CCDC38-201ENST00000344280 DNAH11Q96DT5 4516 aa12.8□□□□□ -0.36
CCDC38-201ENST00000344280 BRK1Q8WUW1 75 aa12.79□□□□□ -0.36
CCDC38-201ENST00000344280 ALMS1Q8TCU4 4167 aa12.79□□□□□ -0.36
CCDC38-201ENST00000344280 H0Y9P7 68 aa12.79□□□□□ -0.36
CCDC38-201ENST00000344280 TRAV22A0A0B4J277 110 aa12.78□□□□□ -0.36
CCDC38-201ENST00000344280 C1orf64Q8NEQ6 169 aa12.78□□□□□ -0.36
CCDC38-201ENST00000344280 hDV103S1A0JD37 113 aa12.77□□□□□ -0.37
CCDC38-201ENST00000344280 NDUFB1O75438 58 aa12.77□□□□□ -0.37
CCDC38-201ENST00000344280 MPLKIPQ8TAP9 179 aa12.76□□□□□ -0.37
CCDC38-201ENST00000344280 C1orf195Q5TG92 126 aa12.75□□□□□ -0.37
CCDC38-201ENST00000344280 IGLV7-43P04211 117 aa12.72□□□□□ -0.37
CCDC38-201ENST00000344280 KRTAP10-2P60368 255 aa12.72□□□□□ -0.37
CCDC38-201ENST00000344280 V9GYY9 64 aa12.71□□□□□ -0.38
CCDC38-201ENST00000344280 ASB16-AS1Q495Z4 193 aa12.7□□□□□ -0.38
CCDC38-201ENST00000344280 IGHV6-1A0A0B4J1U7 121 aa12.69□□□□□ -0.38
CCDC38-201ENST00000344280 CYP4F30PQ9H0H9 118 aa12.69□□□□□ -0.38
CCDC38-201ENST00000344280 C8orf17Q9NRJ1 99 aa12.69□□□□□ -0.38
CCDC38-201ENST00000344280 HYDINQ4G0P3 5121 aa12.67□□□□□ -0.38
CCDC38-201ENST00000344280 CIRBP-AS1Q8TBR5 109 aa12.67□□□□□ -0.38
CCDC38-201ENST00000344280 A0A087X002 238 aa12.66□□□□□ -0.38
CCDC38-201ENST00000344280 NOTCH2NLQ7Z3S9 236 aa12.66□□□□□ -0.38
CCDC38-201ENST00000344280 A0A1B0GVX0 72 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms