RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 TPRXLQ17RH7 258 aa10.91□□□□□ -0.66
SYNE4-202ENST00000340477 SMIM29Q86T20 159 aa10.91□□□□□ -0.66
SYNE4-202ENST00000340477 Q8N377 158 aa10.91□□□□□ -0.66
SYNE4-202ENST00000340477 HRCT1Q6UXD1 115 aa10.9□□□□□ -0.66
SYNE4-202ENST00000340477 CD164Q04900 197 aa10.89□□□□□ -0.67
SYNE4-202ENST00000340477 CDIP1Q9H305 208 aa10.89□□□□□ -0.67
SYNE4-202ENST00000340477 PPDPFLQ8WWR9 84 aa10.88□□□□□ -0.67
SYNE4-202ENST00000340477 OCIAD2Q56VL3 154 aa10.85□□□□□ -0.67
SYNE4-202ENST00000340477 GHRHP01286 108 aa10.84□□□□□ -0.67
SYNE4-202ENST00000340477 SNHG12Q9BXW3 62 aa10.84□□□□□ -0.67
SYNE4-202ENST00000340477 A0A1B0GX51 115 aa10.82□□□□□ -0.68
SYNE4-202ENST00000340477 SMIM6P0DI80 62 aa10.82□□□□□ -0.68
SYNE4-202ENST00000340477 PSMB2P49721 201 aa10.82□□□□□ -0.68
SYNE4-202ENST00000340477 Q6JHZ5 121 aa10.82□□□□□ -0.68
SYNE4-202ENST00000340477 K7ERJ3 54 aa10.8□□□□□ -0.68
SYNE4-202ENST00000340477 TRIAP1O43715 76 aa10.8□□□□□ -0.68
SYNE4-202ENST00000340477 COX6CP09669 75 aa10.8□□□□□ -0.68
SYNE4-202ENST00000340477 FAM218AQ96MZ4 157 aa10.78□□□□□ -0.68
SYNE4-202ENST00000340477 CLEC2BQ92478 149 aa10.77□□□□□ -0.69
SYNE4-202ENST00000340477 IGLV8-61A0A075B6I0 122 aa10.76□□□□□ -0.69
SYNE4-202ENST00000340477 DNAL4O96015 105 aa10.76□□□□□ -0.69
SYNE4-202ENST00000340477 KRTAP13-3Q3SY46 172 aa10.76□□□□□ -0.69
SYNE4-202ENST00000340477 A0A0G2JQZ4 141 aa10.75□□□□□ -0.69
SYNE4-202ENST00000340477 TCL1BO95988 128 aa10.75□□□□□ -0.69
SYNE4-202ENST00000340477 Q5XG85 94 aa10.75□□□□□ -0.69
SYNE4-202ENST00000340477 M0R143 59 aa10.74□□□□□ -0.69
SYNE4-202ENST00000340477 FABP2P12104 132 aa10.72□□□□□ -0.69
SYNE4-202ENST00000340477 IGFL1Q6UW32 110 aa10.72□□□□□ -0.69
SYNE4-202ENST00000340477 RNF213Q63HN8 5207 aa10.71□□□□□ -0.69
SYNE4-202ENST00000340477 H3BQ85 93 aa10.7□□□□□ -0.7
SYNE4-202ENST00000340477 H3BUT2 72 aa10.7□□□□□ -0.7
SYNE4-202ENST00000340477 NDUFV3P56181 108 aaKnown RBP10.7□□□□□ -0.7
SYNE4-202ENST00000340477 TSTD3H0UI37 97 aa10.69□□□□□ -0.7
SYNE4-202ENST00000340477 ORMDL1Q9P0S3 153 aa10.69□□□□□ -0.7
SYNE4-202ENST00000340477 SCGB1C2P0DMR2 95 aa10.68□□□□□ -0.7
SYNE4-202ENST00000340477 TRBV7-7A0A0K0K1E9 115 aa10.67□□□□□ -0.7
SYNE4-202ENST00000340477 H3BMG7 143 aa10.65□□□□□ -0.7
SYNE4-202ENST00000340477 C1orf195Q5TG92 126 aa10.64□□□□□ -0.71
SYNE4-202ENST00000340477 A0A0U1RQV1 116 aa10.62□□□□□ -0.71
SYNE4-202ENST00000340477 TMEM256-PLSCR3K7ERE1 68 aa10.62□□□□□ -0.71
SYNE4-202ENST00000340477 LOC105371267A0A1B0GV96 52 aa10.61□□□□□ -0.71
SYNE4-202ENST00000340477 TRACP01848 142 aa10.61□□□□□ -0.71
SYNE4-202ENST00000340477 SEC61BP60468 96 aaKnown RBP10.61□□□□□ -0.71
SYNE4-202ENST00000340477 ASB16-AS1Q495Z4 193 aa10.61□□□□□ -0.71
SYNE4-202ENST00000340477 SS18L2Q9UHA2 77 aa10.61□□□□□ -0.71
SYNE4-202ENST00000340477 TEN1Q86WV5 123 aa10.6□□□□□ -0.71
SYNE4-202ENST00000340477 LST1O00453 97 aa10.59□□□□□ -0.71
SYNE4-202ENST00000340477 Q6Q795 121 aa10.59□□□□□ -0.71
SYNE4-202ENST00000340477 C9orf92A6NGG3 77 aa10.58□□□□□ -0.72
SYNE4-202ENST00000340477 XP32Q5T750 250 aa10.58□□□□□ -0.72
SYNE4-202ENST00000340477 MUC17Q685J3 4493 aa10.57□□□□□ -0.72
SYNE4-202ENST00000340477 A0A1B0GV72 72 aa10.54□□□□□ -0.72
SYNE4-202ENST00000340477 UBE2V1Q13404 147 aa10.54□□□□□ -0.72
SYNE4-202ENST00000340477 BATFQ16520 125 aa10.54□□□□□ -0.72
SYNE4-202ENST00000340477 LYRM7Q5U5X0 104 aa10.54□□□□□ -0.72
SYNE4-202ENST00000340477 ANKRD29Q8N6D5 301 aa10.54□□□□□ -0.72
SYNE4-202ENST00000340477 ATXN8Q156A1 80 aa10.52□□□□□ -0.73
SYNE4-202ENST00000340477 A0A087WSZ3 146 aa10.51□□□□□ -0.73
SYNE4-202ENST00000340477 MUC2Q02817 5179 aa10.5□□□□□ -0.73
SYNE4-202ENST00000340477 NAA38Q9BRA0 125 aaKnown RBP10.49□□□□□ -0.73
SYNE4-202ENST00000340477 TRBV7-4A0A0J9YYF1 115 aa10.46□□□□□ -0.73
SYNE4-202ENST00000340477 A0A1W2PNM2 257 aa10.46□□□□□ -0.73
SYNE4-202ENST00000340477 BAALC-AS2P0C853 105 aa10.46□□□□□ -0.73
SYNE4-202ENST00000340477 RBM3P98179 157 aaKnown RBP10.45□□□□□ -0.74
SYNE4-202ENST00000340477 CCKP06307 115 aa10.44□□□□□ -0.74
SYNE4-202ENST00000340477 DSCR8Q96T75 97 aa10.44□□□□□ -0.74
SYNE4-202ENST00000340477 TRBV20-1A0A075B6N2 111 aa10.42□□□□□ -0.74
SYNE4-202ENST00000340477 VPS25Q9BRG1 176 aa10.41□□□□□ -0.74
SYNE4-202ENST00000340477 C9JAW5 83 aa10.38□□□□□ -0.75
SYNE4-202ENST00000340477 PCOTHQ58A44 107 aa10.38□□□□□ -0.75
SYNE4-202ENST00000340477 OBSCN-AS1Q96MR7 158 aa10.38□□□□□ -0.75
SYNE4-202ENST00000340477 SIGMAR1Q99720 223 aa10.38□□□□□ -0.75
SYNE4-202ENST00000340477 JMJD7-PLA2G4BH0Y9G9 81 aa10.37□□□□□ -0.75
SYNE4-202ENST00000340477 RPL37P61927 97 aaKnown RBP10.37□□□□□ -0.75
SYNE4-202ENST00000340477 C21orf62-AS1Q17RA5 79 aa10.37□□□□□ -0.75
SYNE4-202ENST00000340477 C9orf118A6NHY6 69 aa10.36□□□□□ -0.75
SYNE4-202ENST00000340477 Q96NJ1 140 aa10.34□□□□□ -0.75
SYNE4-202ENST00000340477 TAX1BP3O14907 124 aa10.32□□□□□ -0.76
SYNE4-202ENST00000340477 IGKV4-1P06312 121 aa10.32□□□□□ -0.76
SYNE4-202ENST00000340477 A0A1W2PPM0 123 aa10.31□□□□□ -0.76
SYNE4-202ENST00000340477 PDE6GP18545 87 aa10.3□□□□□ -0.76
SYNE4-202ENST00000340477 KRTAP4-1Q9BYQ7 146 aa10.29□□□□□ -0.76
SYNE4-202ENST00000340477 Q75L30 129 aa10.27□□□□□ -0.77
SYNE4-202ENST00000340477 LOC110117498A0A087WWA1 95 aa10.26□□□□□ -0.77
SYNE4-202ENST00000340477 ATP11AUNQ6ZP68 121 aa10.26□□□□□ -0.77
SYNE4-202ENST00000340477 LINC00472Q9H8W2 130 aa10.26□□□□□ -0.77
SYNE4-202ENST00000340477 H3BT86 120 aa10.25□□□□□ -0.77
SYNE4-202ENST00000340477 A0A1B0GW54 56 aa10.24□□□□□ -0.77
SYNE4-202ENST00000340477 COL5A1-AS1Q5SY13 56 aa10.24□□□□□ -0.77
SYNE4-202ENST00000340477 Q6ZQT0 140 aa10.24□□□□□ -0.77
SYNE4-202ENST00000340477 C14orf132Q9NPU4 83 aa10.24□□□□□ -0.77
SYNE4-202ENST00000340477 DSCR10P59022 87 aa10.23□□□□□ -0.77
SYNE4-202ENST00000340477 DEFB116Q30KQ4 102 aa10.23□□□□□ -0.77
SYNE4-202ENST00000340477 LINC00313P59037 77 aa10.22□□□□□ -0.77
SYNE4-202ENST00000340477 FAT4Q6V0I7 4981 aa10.21□□□□□ -0.77
SYNE4-202ENST00000340477 J3KT08 172 aa10.21□□□□□ -0.77
SYNE4-202ENST00000340477 SPCS1Q9Y6A9 102 aa10.21□□□□□ -0.77
SYNE4-202ENST00000340477 IGHV6-1A0A0B4J1U7 121 aa10.18□□□□□ -0.78
SYNE4-202ENST00000340477 C20orf166-AS1Q96NR2 134 aa10.18□□□□□ -0.78
SYNE4-202ENST00000340477 MTURNQ8N3F0 131 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms