RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 APLNQ9ULZ1 77 aa8.74□□□□□ -1.01
RTN4-202ENST00000337526 IGLV7-43P04211 117 aa8.73□□□□□ -1.01
RTN4-202ENST00000337526 EYSQ5T1H1 3165 aa8.73□□□□□ -1.01
RTN4-202ENST00000337526 MIR22HGQ0VDD5 57 aa8.73□□□□□ -1.01
RTN4-202ENST00000337526 LINC00304Q8N9R0 145 aa8.71□□□□□ -1.01
RTN4-202ENST00000337526 Q8NDZ9 215 aa8.71□□□□□ -1.01
RTN4-202ENST00000337526 CELSR3Q9NYQ7 3312 aa8.71□□□□□ -1.02
RTN4-202ENST00000337526 NBEAQ8NFP9 2946 aa8.71□□□□□ -1.02
RTN4-202ENST00000337526 FLNCQ14315 2725 aa8.71□□□□□ -1.02
RTN4-202ENST00000337526 FRYLO94915 3013 aa8.67□□□□□ -1.02
RTN4-202ENST00000337526 C9orf92A6NGG3 77 aa8.65□□□□□ -1.02
RTN4-202ENST00000337526 PRR26Q8N8Z3 221 aa8.65□□□□□ -1.02
RTN4-202ENST00000337526 SPEGQ15772 3267 aa8.65□□□□□ -1.03
RTN4-202ENST00000337526 CYSTM1Q9H1C7 97 aa8.64□□□□□ -1.03
RTN4-202ENST00000337526 CD164Q04900 197 aa8.64□□□□□ -1.03
RTN4-202ENST00000337526 SMR3BP02814 79 aaPredicted RBP8.64□□□□□ -1.03
RTN4-202ENST00000337526 KTN1-AS1Q86SY8 53 aa8.63□□□□□ -1.03
RTN4-202ENST00000337526 KALRNO60229 2985 aa8.62□□□□□ -1.03
RTN4-202ENST00000337526 Q1T7F1 81 aa8.62□□□□□ -1.03
RTN4-202ENST00000337526 FLG2Q5D862 2391 aaPredicted RBP8.62□□□□□ -1.03
RTN4-202ENST00000337526 WIPF1O43516 503 aa8.62□□□□□ -1.03
RTN4-202ENST00000337526 SPINT4Q6UDR6 99 aa8.61□□□□□ -1.03
RTN4-202ENST00000337526 REV3LO60673 3130 aa8.61□□□□□ -1.03
RTN4-202ENST00000337526 CDC42SE1Q9NRR8 79 aa8.6□□□□□ -1.03
RTN4-202ENST00000337526 SPRR1AP35321 89 aa8.6□□□□□ -1.03
RTN4-202ENST00000337526 NSD1Q96L73 2696 aaPredicted RBP8.59□□□□□ -1.03
RTN4-202ENST00000337526 DMXL2Q8TDJ6 3036 aa8.59□□□□□ -1.03
RTN4-202ENST00000337526 Q8N1X5 172 aa8.58□□□□□ -1.04
RTN4-202ENST00000337526 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.58□□□□□ -1.04
RTN4-202ENST00000337526 TACC2O95359 2948 aa8.57□□□□□ -1.04
RTN4-202ENST00000337526 IGLV7-46A0A075B6I9 117 aa8.57□□□□□ -1.04
RTN4-202ENST00000337526 STAB2Q8WWQ8 2551 aa8.57□□□□□ -1.04
RTN4-202ENST00000337526 LCA10Q71F78 164 aa8.55□□□□□ -1.04
RTN4-202ENST00000337526 Q5XG85 94 aa8.54□□□□□ -1.04
RTN4-202ENST00000337526 ITPR1Q14643 2758 aa8.54□□□□□ -1.04
RTN4-202ENST00000337526 FP248Q71RG6 208 aaPredicted RBP8.53□□□□□ -1.04
RTN4-202ENST00000337526 TNP2Q05952 138 aa8.53□□□□□ -1.04
RTN4-202ENST00000337526 ATMQ13315 3056 aa8.53□□□□□ -1.04
RTN4-202ENST00000337526 ADGRG4Q8IZF6 3080 aa8.53□□□□□ -1.04
RTN4-202ENST00000337526 SPTBN5Q9NRC6 3674 aaKnown RBP8.52□□□□□ -1.04
RTN4-202ENST00000337526 ITPR2Q14571 2701 aa8.52□□□□□ -1.04
RTN4-202ENST00000337526 CRIPTQ9P021 101 aa8.52□□□□□ -1.05
RTN4-202ENST00000337526 MMP24-AS1A0A0U1RRL7 71 aa8.52□□□□□ -1.05
RTN4-202ENST00000337526 FAM229BQ4G0N7 80 aa8.51□□□□□ -1.05
RTN4-202ENST00000337526 BOD1L1Q8NFC6 3051 aa8.49□□□□□ -1.05
RTN4-202ENST00000337526 ASH1LQ9NR48 2969 aaKnown RBP8.49□□□□□ -1.05
RTN4-202ENST00000337526 Q8N9P0 234 aaPredicted RBP8.49□□□□□ -1.05
RTN4-202ENST00000337526 HRES1P13985 223 aa8.49□□□□□ -1.05
RTN4-202ENST00000337526 COL12A1Q99715 3063 aa8.48□□□□□ -1.05
RTN4-202ENST00000337526 LINC00472Q9H8W2 130 aa8.46□□□□□ -1.05
RTN4-202ENST00000337526 DMXL1Q9Y485 3027 aa8.46□□□□□ -1.05
RTN4-202ENST00000337526 KRTAP26-1Q6PEX3 210 aa8.46□□□□□ -1.06
RTN4-202ENST00000337526 SPRR1BP22528 89 aa8.46□□□□□ -1.06
RTN4-202ENST00000337526 Q75L30 129 aa8.45□□□□□ -1.06
RTN4-202ENST00000337526 A0A0D9SG42 100 aa8.43□□□□□ -1.06
RTN4-202ENST00000337526 J3QL48 77 aa8.43□□□□□ -1.06
RTN4-202ENST00000337526 DMBT1Q9UGM3 2413 aaPredicted RBP8.43□□□□□ -1.06
RTN4-202ENST00000337526 COX6B2Q6YFQ2 88 aa8.42□□□□□ -1.06
RTN4-202ENST00000337526 LINC01558Q9Y6Z2 57 aa8.42□□□□□ -1.06
RTN4-202ENST00000337526 PLAC8Q9NZF1 115 aa8.41□□□□□ -1.06
RTN4-202ENST00000337526 KRTAP1-5Q9BYS1 174 aa8.4□□□□□ -1.06
RTN4-202ENST00000337526 MYO15AQ9UKN7 3530 aa8.4□□□□□ -1.06
RTN4-202ENST00000337526 OXTP01178 125 aa8.4□□□□□ -1.07
RTN4-202ENST00000337526 HIVEP1P15822 2718 aa8.39□□□□□ -1.07
RTN4-202ENST00000337526 RBM12B-AS1Q9P1G2 102 aa8.37□□□□□ -1.07
RTN4-202ENST00000337526 LINC01554Q52M75 96 aa8.36□□□□□ -1.07
RTN4-202ENST00000337526 A0A1B0GU33 70 aa8.35□□□□□ -1.07
RTN4-202ENST00000337526 Q5VV11 94 aa8.35□□□□□ -1.07
RTN4-202ENST00000337526 LRBAP50851 2863 aa8.34□□□□□ -1.07
RTN4-202ENST00000337526 CFAP47Q6ZTR5 3102 aa8.33□□□□□ -1.08
RTN4-202ENST00000337526 UTP20O75691 2785 aaKnown RBP8.33□□□□□ -1.08
RTN4-202ENST00000337526 Q5W150 140 aa8.31□□□□□ -1.08
RTN4-202ENST00000337526 KRTAP4-16G5E9R7 235 aaPredicted RBP8.31□□□□□ -1.08
RTN4-202ENST00000337526 ZZEF1O43149 2961 aa8.31□□□□□ -1.08
RTN4-202ENST00000337526 ZCCHC13Q8WW36 166 aaKnown RBP8.3□□□□□ -1.08
RTN4-202ENST00000337526 APCP25054 2843 aa8.28□□□□□ -1.08
RTN4-202ENST00000337526 CELSR2Q9HCU4 2923 aa8.28□□□□□ -1.08
RTN4-202ENST00000337526 SPINK7P58062 85 aa8.27□□□□□ -1.08
RTN4-202ENST00000337526 LOC400499M0QZD8 3231 aa8.25□□□□□ -1.09
RTN4-202ENST00000337526 NIPBLQ6KC79 2804 aaeCLIP8.24□□□□□ -1.091e-6■■■□□ 18.2
RTN4-202ENST00000337526 PRAC1Q96KF2 57 aa8.24□□□□□ -1.09
RTN4-202ENST00000337526 Q6ZSA8 131 aa8.22□□□□□ -1.09
RTN4-202ENST00000337526 KRTAP29-1A8MX34 341 aaPredicted RBP8.22□□□□□ -1.09
RTN4-202ENST00000337526 USP34Q70CQ2 3546 aa8.2□□□□□ -1.1
RTN4-202ENST00000337526 ZANQ9Y493 2812 aa8.2□□□□□ -1.1
RTN4-202ENST00000337526 PANO1I0J062 215 aa8.19□□□□□ -1.1
RTN4-202ENST00000337526 KRTAP21-3Q3LHN1 58 aa8.18□□□□□ -1.1
RTN4-202ENST00000337526 KMT2BQ9UMN6 2715 aaPredicted RBP8.17□□□□□ -1.1
RTN4-202ENST00000337526 LINC00483Q53H64 154 aa8.17□□□□□ -1.1
RTN4-202ENST00000337526 TENM4Q6N022 2769 aa8.16□□□□□ -1.1
RTN4-202ENST00000337526 MUC3AQ02505 3323 aa8.16□□□□□ -1.1
RTN4-202ENST00000337526 Q6ZR54 194 aa8.16□□□□□ -1.1
RTN4-202ENST00000337526 DMAC1Q96GE9 116 aa8.15□□□□□ -1.11
RTN4-202ENST00000337526 DCHS2Q6V1P9 2916 aa8.13□□□□□ -1.11
RTN4-202ENST00000337526 KRTAP10-2P60368 255 aa8.11□□□□□ -1.11
RTN4-202ENST00000337526 KRTAP10-1P60331 282 aa8.11□□□□□ -1.11
RTN4-202ENST00000337526 CSAG1Q6PB30 78 aa8.11□□□□□ -1.11
RTN4-202ENST00000337526 CAMK2N1Q7Z7J9 78 aa8.09□□□□□ -1.11
RTN4-202ENST00000337526 LUZP6Q538Z0 58 aa8.08□□□□□ -1.12
RTN4-202ENST00000337526 A0A087X002 238 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 171.5 ms