RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.6□□□□□ -0.71
CDC42EP4-201ENST00000335793 IGLV5-48A0A075B6I7 105 aa10.6□□□□□ -0.71
CDC42EP4-201ENST00000335793 PRLHP81277 87 aa10.59□□□□□ -0.71
CDC42EP4-201ENST00000335793 DNHD1Q96M86 4753 aa10.59□□□□□ -0.71
CDC42EP4-201ENST00000335793 REG3GQ6UW15 175 aa10.58□□□□□ -0.72
CDC42EP4-201ENST00000335793 Q8NBF4 154 aa10.58□□□□□ -0.72
CDC42EP4-201ENST00000335793 UBE2AP49459 152 aa10.57□□□□□ -0.72
CDC42EP4-201ENST00000335793 H3BS24 57 aa10.57□□□□□ -0.72
CDC42EP4-201ENST00000335793 TLX1NBP0CAT3 122 aa10.57□□□□□ -0.72
CDC42EP4-201ENST00000335793 UBE2DNLQ8IWF7 75 aa10.56□□□□□ -0.72
CDC42EP4-201ENST00000335793 STAB2Q8WWQ8 2551 aa10.56□□□□□ -0.72
CDC42EP4-201ENST00000335793 LCA10Q71F78 164 aa10.55□□□□□ -0.72
CDC42EP4-201ENST00000335793 A0A096LNI7 61 aa10.53□□□□□ -0.72
CDC42EP4-201ENST00000335793 K7EQZ3 153 aa10.53□□□□□ -0.72
CDC42EP4-201ENST00000335793 LINC00476Q8WZB0 136 aa10.52□□□□□ -0.72
CDC42EP4-201ENST00000335793 PLA2G2DQ9UNK4 145 aa10.52□□□□□ -0.72
CDC42EP4-201ENST00000335793 WFDC13Q8IUB5 93 aa10.52□□□□□ -0.73
CDC42EP4-201ENST00000335793 KRTAP7-1Q8IUC3 87 aa10.52□□□□□ -0.73
CDC42EP4-201ENST00000335793 KRTAP4-16G5E9R7 235 aaPredicted RBP10.51□□□□□ -0.73
CDC42EP4-201ENST00000335793 A0A087WSZ3 146 aa10.5□□□□□ -0.73
CDC42EP4-201ENST00000335793 LINC00208Q96KT6 92 aa10.5□□□□□ -0.73
CDC42EP4-201ENST00000335793 ANK2Q01484 3957 aa10.5□□□□□ -0.73
CDC42EP4-201ENST00000335793 SPRR1AP35321 89 aa10.5□□□□□ -0.73
CDC42EP4-201ENST00000335793 B9D2Q9BPU9 175 aa10.49□□□□□ -0.73
CDC42EP4-201ENST00000335793 C8orf87E5RJ46 101 aa10.48□□□□□ -0.73
CDC42EP4-201ENST00000335793 IGLV5-37A0A075B6J1 123 aa10.47□□□□□ -0.73
CDC42EP4-201ENST00000335793 Q8N9P0 234 aaPredicted RBP10.46□□□□□ -0.73
CDC42EP4-201ENST00000335793 CHTF8P0CG12 524 aa10.46□□□□□ -0.73
CDC42EP4-201ENST00000335793 DSCR10P59022 87 aa10.46□□□□□ -0.73
CDC42EP4-201ENST00000335793 PRAC1Q96KF2 57 aa10.46□□□□□ -0.73
CDC42EP4-201ENST00000335793 TNP2Q05952 138 aa10.46□□□□□ -0.74
CDC42EP4-201ENST00000335793 TENM2Q9NT68 2774 aa10.45□□□□□ -0.74
CDC42EP4-201ENST00000335793 IGFL1Q6UW32 110 aa10.45□□□□□ -0.74
CDC42EP4-201ENST00000335793 A0A1B0GW54 56 aa10.44□□□□□ -0.74
CDC42EP4-201ENST00000335793 K7EIL1 84 aa10.43□□□□□ -0.74
CDC42EP4-201ENST00000335793 NDUFS5O43920 106 aa10.43□□□□□ -0.74
CDC42EP4-201ENST00000335793 RPL37AP61513 92 aaKnown RBP10.43□□□□□ -0.74
CDC42EP4-201ENST00000335793 ATP11AUNQ6ZP68 121 aa10.43□□□□□ -0.74
CDC42EP4-201ENST00000335793 SPRR4Q96PI1 79 aa10.43□□□□□ -0.74
CDC42EP4-201ENST00000335793 SRRM2Q9UQ35 2752 aaKnown RBP10.43□□□□□ -0.74
CDC42EP4-201ENST00000335793 PHF5AQ7RTV0 110 aaKnown RBP10.42□□□□□ -0.74
CDC42EP4-201ENST00000335793 ZCCHC13Q8WW36 166 aaKnown RBP10.41□□□□□ -0.74
CDC42EP4-201ENST00000335793 A6NN06 94 aa10.41□□□□□ -0.74
CDC42EP4-201ENST00000335793 KRTAP1-5Q9BYS1 174 aa10.4□□□□□ -0.74
CDC42EP4-201ENST00000335793 CSMD3Q7Z407 3707 aa10.4□□□□□ -0.75
CDC42EP4-201ENST00000335793 MP68P56378 58 aa10.39□□□□□ -0.75
CDC42EP4-201ENST00000335793 SPAG11AQ6PDA7 123 aa10.39□□□□□ -0.75
CDC42EP4-201ENST00000335793 C7orf65Q6ZTY9 151 aa10.39□□□□□ -0.75
CDC42EP4-201ENST00000335793 LIMD2Q9BT23 127 aa10.39□□□□□ -0.75
CDC42EP4-201ENST00000335793 TGP01266 2768 aa10.38□□□□□ -0.75
CDC42EP4-201ENST00000335793 CYP4F30PQ9H0H9 118 aa10.38□□□□□ -0.75
CDC42EP4-201ENST00000335793 MOBPQ13875 183 aa10.35□□□□□ -0.75
CDC42EP4-201ENST00000335793 H0Y9J4 135 aa10.34□□□□□ -0.75
CDC42EP4-201ENST00000335793 ADM2Q7Z4H4 148 aa10.33□□□□□ -0.76
CDC42EP4-201ENST00000335793 NDUFB1O75438 58 aa10.33□□□□□ -0.76
CDC42EP4-201ENST00000335793 C14orf177Q52M58 125 aa10.31□□□□□ -0.76
CDC42EP4-201ENST00000335793 LCE6AA0A183 80 aa10.3□□□□□ -0.76
CDC42EP4-201ENST00000335793 PCOTHQ58A44 107 aa10.29□□□□□ -0.76
CDC42EP4-201ENST00000335793 CASC2Q6XLA1 102 aa10.29□□□□□ -0.76
CDC42EP4-201ENST00000335793 KRTAP11-1Q8IUC1 163 aa10.29□□□□□ -0.76
CDC42EP4-201ENST00000335793 IGLV9-49A0A0B4J1Y8 123 aa10.28□□□□□ -0.76
CDC42EP4-201ENST00000335793 CNBPP62633 177 aaKnown RBP10.28□□□□□ -0.76
CDC42EP4-201ENST00000335793 H0Y9P7 68 aa10.27□□□□□ -0.76
CDC42EP4-201ENST00000335793 SPINK7P58062 85 aa10.27□□□□□ -0.76
CDC42EP4-201ENST00000335793 LINC00313P59037 77 aa10.27□□□□□ -0.76
CDC42EP4-201ENST00000335793 COA5Q86WW8 74 aa10.27□□□□□ -0.77
CDC42EP4-201ENST00000335793 CDC42SE1Q9NRR8 79 aa10.27□□□□□ -0.77
CDC42EP4-201ENST00000335793 Q75L30 129 aa10.25□□□□□ -0.77
CDC42EP4-201ENST00000335793 LOC101927531A0A1B0GV80 90 aa10.25□□□□□ -0.77
CDC42EP4-201ENST00000335793 COL7A1Q02388 2944 aa10.22□□□□□ -0.77
CDC42EP4-201ENST00000335793 MEGF8Q7Z7M0 2845 aa10.21□□□□□ -0.77
CDC42EP4-201ENST00000335793 DNAH10Q8IVF4 4471 aa10.21□□□□□ -0.78
CDC42EP4-201ENST00000335793 C9orf163Q8N9P6 203 aa10.2□□□□□ -0.78
CDC42EP4-201ENST00000335793 APLNQ9ULZ1 77 aa10.2□□□□□ -0.78
CDC42EP4-201ENST00000335793 CMYA5Q8N3K9 4069 aa10.19□□□□□ -0.78
CDC42EP4-201ENST00000335793 IGLV8-61A0A075B6I0 122 aa10.18□□□□□ -0.78
CDC42EP4-201ENST00000335793 PANO1I0J062 215 aa10.17□□□□□ -0.78
CDC42EP4-201ENST00000335793 A8MWP4 228 aa10.17□□□□□ -0.78
CDC42EP4-201ENST00000335793 HUWE1Q7Z6Z7 4374 aaKnown RBP10.17□□□□□ -0.78
CDC42EP4-201ENST00000335793 NBDYA0A0U1RRE5 68 aa10.16□□□□□ -0.78
CDC42EP4-201ENST00000335793 LYSTQ99698 3801 aa10.14□□□□□ -0.79
CDC42EP4-201ENST00000335793 LINC01554Q52M75 96 aa10.13□□□□□ -0.79
CDC42EP4-201ENST00000335793 CDK2AP2O75956 126 aa10.13□□□□□ -0.79
CDC42EP4-201ENST00000335793 LINC00472Q9H8W2 130 aa10.12□□□□□ -0.79
CDC42EP4-201ENST00000335793 FBN3Q75N90 2809 aa10.11□□□□□ -0.79
CDC42EP4-201ENST00000335793 PRR26Q8N8Z3 221 aa10.11□□□□□ -0.79
CDC42EP4-201ENST00000335793 ANAPC11Q9NYG5 84 aa10.11□□□□□ -0.79
CDC42EP4-201ENST00000335793 KRTAP29-1A8MX34 341 aaPredicted RBP10.1□□□□□ -0.79
CDC42EP4-201ENST00000335793 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.1□□□□□ -0.79
CDC42EP4-201ENST00000335793 IGHV6-1A0A0B4J1U7 121 aa10.09□□□□□ -0.79
CDC42EP4-201ENST00000335793 SPRR1BP22528 89 aa10.09□□□□□ -0.79
CDC42EP4-201ENST00000335793 SPINK6Q6UWN8 80 aa10.06□□□□□ -0.8
CDC42EP4-201ENST00000335793 SPANXA2-OT1Q8N9U9 137 aa10.06□□□□□ -0.8
CDC42EP4-201ENST00000335793 NUPR2A6NF83 97 aa10.04□□□□□ -0.8
CDC42EP4-201ENST00000335793 PRKDCP78527 4128 aaKnown RBP10.04□□□□□ -0.8
CDC42EP4-201ENST00000335793 MMP24-AS1A0A0U1RRL7 71 aa10.02□□□□□ -0.81
CDC42EP4-201ENST00000335793 DNAH9Q9NYC9 4486 aa10.01□□□□□ -0.81
CDC42EP4-201ENST00000335793 H3BPC8 53 aa10.01□□□□□ -0.81
CDC42EP4-201ENST00000335793 DNAH1Q9P2D7 4330 aa10□□□□□ -0.81
CDC42EP4-201ENST00000335793 LINC01558Q9Y6Z2 57 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms