RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 PRR26Q8N8Z3 221 aa6.69□□□□□ -1.34
SPTBN1-201ENST00000333896 CEP350Q5VT06 3117 aa6.69□□□□□ -1.34
SPTBN1-201ENST00000333896 NDUFAF8A1L188 74 aa6.68□□□□□ -1.34
SPTBN1-201ENST00000333896 A0A1W2PNM2 257 aa6.68□□□□□ -1.34
SPTBN1-201ENST00000333896 TNP2Q05952 138 aa6.66□□□□□ -1.34
SPTBN1-201ENST00000333896 ITPR1Q14643 2758 aa6.66□□□□□ -1.34
SPTBN1-201ENST00000333896 A6NN06 94 aa6.65□□□□□ -1.35
SPTBN1-201ENST00000333896 M0R2T5 61 aa6.64□□□□□ -1.35
SPTBN1-201ENST00000333896 ROMO1P60602 79 aa6.62□□□□□ -1.35
SPTBN1-201ENST00000333896 SMR3BP02814 79 aaPredicted RBP6.61□□□□□ -1.35
SPTBN1-201ENST00000333896 HRES1P13985 223 aa6.61□□□□□ -1.35
SPTBN1-201ENST00000333896 PSORS1C2Q9UIG4 136 aa6.61□□□□□ -1.35
SPTBN1-201ENST00000333896 H1FX-AS1Q4G0G2 97 aa6.6□□□□□ -1.35
SPTBN1-201ENST00000333896 CFAP54Q96N23 3096 aa6.6□□□□□ -1.35
SPTBN1-201ENST00000333896 FLNCQ14315 2725 aa6.59□□□□□ -1.35
SPTBN1-201ENST00000333896 Q6ZSA8 131 aa6.59□□□□□ -1.35
SPTBN1-201ENST00000333896 PCNTO95613 3336 aa6.59□□□□□ -1.36
SPTBN1-201ENST00000333896 S4R3F8 94 aa6.58□□□□□ -1.36
SPTBN1-201ENST00000333896 A0A096LNT2 108 aa6.56□□□□□ -1.36
SPTBN1-201ENST00000333896 CNBPP62633 177 aaKnown RBP6.55□□□□□ -1.36
SPTBN1-201ENST00000333896 LINC00612Q8N6U2 182 aa6.55□□□□□ -1.36
SPTBN1-201ENST00000333896 SPATA8Q6RVD6 105 aa6.55□□□□□ -1.36
SPTBN1-201ENST00000333896 A0A1W2PPR1 153 aa6.54□□□□□ -1.36
SPTBN1-201ENST00000333896 UBR5O95071 2799 aaPredicted RBP6.53□□□□□ -1.36
SPTBN1-201ENST00000333896 PLAC4Q8WY50 150 aa6.52□□□□□ -1.36
SPTBN1-201ENST00000333896 C19orf73Q9NVV2 129 aa6.52□□□□□ -1.37
SPTBN1-201ENST00000333896 DSPP15924 2871 aaKnown RBP6.51□□□□□ -1.37
SPTBN1-201ENST00000333896 ZCCHC13Q8WW36 166 aaKnown RBP6.5□□□□□ -1.37
SPTBN1-201ENST00000333896 R4GN34 69 aa6.5□□□□□ -1.37
SPTBN1-201ENST00000333896 Q6ZR54 194 aa6.5□□□□□ -1.37
SPTBN1-201ENST00000333896 WWC2-AS2Q96NR7 200 aa6.5□□□□□ -1.37
SPTBN1-201ENST00000333896 LAMA2P24043 3122 aaKnown RBP6.5□□□□□ -1.37
SPTBN1-201ENST00000333896 MMP24-AS1A0A0U1RRL7 71 aa6.5□□□□□ -1.37
SPTBN1-201ENST00000333896 KRTAP25-1Q3LHN0 102 aa6.49□□□□□ -1.37
SPTBN1-201ENST00000333896 MGAQ8IWI9 3026 aa6.49□□□□□ -1.37
SPTBN1-201ENST00000333896 UTRNP46939 3433 aa6.49□□□□□ -1.37
SPTBN1-201ENST00000333896 A0A087WTM6 91 aa6.48□□□□□ -1.37
SPTBN1-201ENST00000333896 CHD9Q3L8U1 2897 aa6.47□□□□□ -1.37
SPTBN1-201ENST00000333896 LCE6AA0A183 80 aa6.46□□□□□ -1.37
SPTBN1-201ENST00000333896 RPL37P61927 97 aaKnown RBP6.46□□□□□ -1.37
SPTBN1-201ENST00000333896 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.46□□□□□ -1.38
SPTBN1-201ENST00000333896 NBEAL2Q6ZNJ1 2754 aa6.46□□□□□ -1.38
SPTBN1-201ENST00000333896 LINC00472Q9H8W2 130 aa6.45□□□□□ -1.38
SPTBN1-201ENST00000333896 GIG44P09565 113 aaPredicted RBP6.45□□□□□ -1.38
SPTBN1-201ENST00000333896 FRYLO94915 3013 aa6.44□□□□□ -1.38
SPTBN1-201ENST00000333896 TRANK1O15050 2925 aa6.44□□□□□ -1.38
SPTBN1-201ENST00000333896 LRBAP50851 2863 aa6.44□□□□□ -1.38
SPTBN1-201ENST00000333896 C5orf42Q9H799 3197 aa6.44□□□□□ -1.38
SPTBN1-201ENST00000333896 NF1P21359 2839 aa6.41□□□□□ -1.38
SPTBN1-201ENST00000333896 SPRR1AP35321 89 aa6.41□□□□□ -1.38
SPTBN1-201ENST00000333896 TENM1Q9UKZ4 2725 aa6.39□□□□□ -1.39
SPTBN1-201ENST00000333896 GOLGB1Q14789 3259 aaKnown RBP6.39□□□□□ -1.39
SPTBN1-201ENST00000333896 KRTAP24-1Q3LI83 254 aa6.39□□□□□ -1.39
SPTBN1-201ENST00000333896 C20orf166-AS1Q96NR2 134 aa6.38□□□□□ -1.39
SPTBN1-201ENST00000333896 Q5W150 140 aa6.38□□□□□ -1.39
SPTBN1-201ENST00000333896 KRTAP10-11P60412 298 aa6.37□□□□□ -1.39
SPTBN1-201ENST00000333896 KALRNO60229 2985 aa6.37□□□□□ -1.39
SPTBN1-201ENST00000333896 M0QZ58 72 aa6.36□□□□□ -1.39
SPTBN1-201ENST00000333896 SPRR1BP22528 89 aa6.35□□□□□ -1.39
SPTBN1-201ENST00000333896 CHD7Q9P2D1 2997 aa6.35□□□□□ -1.39
SPTBN1-201ENST00000333896 CASC10Q5T4H9 136 aa6.35□□□□□ -1.39
SPTBN1-201ENST00000333896 NOTCH2NLQ7Z3S9 236 aa6.33□□□□□ -1.4
SPTBN1-201ENST00000333896 TENM3Q9P273 2699 aa6.31□□□□□ -1.4
SPTBN1-201ENST00000333896 K7EIL1 84 aa6.31□□□□□ -1.4
SPTBN1-201ENST00000333896 PP632Q6XCG6 107 aa6.31□□□□□ -1.4
SPTBN1-201ENST00000333896 KRTAP29-1A8MX34 341 aaPredicted RBP6.3□□□□□ -1.4
SPTBN1-201ENST00000333896 FRYQ5TBA9 3013 aa6.3□□□□□ -1.4
SPTBN1-201ENST00000333896 ADM2Q7Z4H4 148 aa6.28□□□□□ -1.4
SPTBN1-201ENST00000333896 Q8NDZ9 215 aa6.28□□□□□ -1.4
SPTBN1-201ENST00000333896 HIVEP1P15822 2718 aa6.24□□□□□ -1.41
SPTBN1-201ENST00000333896 VPS13AQ96RL7 3174 aa6.24□□□□□ -1.41
SPTBN1-201ENST00000333896 TACC2O95359 2948 aa6.23□□□□□ -1.41
SPTBN1-201ENST00000333896 KRTAP26-1Q6PEX3 210 aa6.23□□□□□ -1.41
SPTBN1-201ENST00000333896 CELSR2Q9HCU4 2923 aa6.22□□□□□ -1.41
SPTBN1-201ENST00000333896 NBEAQ8NFP9 2946 aa6.22□□□□□ -1.41
SPTBN1-201ENST00000333896 PANO1I0J062 215 aa6.21□□□□□ -1.41
SPTBN1-201ENST00000333896 NIPBLQ6KC79 2804 aaeCLIP6.21□□□□□ -1.421e-5■■■■□ 22.3
SPTBN1-201ENST00000333896 TNRC18O15417 2968 aaPredicted RBP6.18□□□□□ -1.42
SPTBN1-201ENST00000333896 TRIOO75962 3097 aa6.17□□□□□ -1.42
SPTBN1-201ENST00000333896 A8MUU9 505 aa6.16□□□□□ -1.42
SPTBN1-201ENST00000333896 C10orf95Q9H7T3 257 aa6.14□□□□□ -1.43
SPTBN1-201ENST00000333896 REV3LO60673 3130 aa6.14□□□□□ -1.43
SPTBN1-201ENST00000333896 KRTAP4-16G5E9R7 235 aaPredicted RBP6.14□□□□□ -1.43
SPTBN1-201ENST00000333896 RANBP2P49792 3224 aaKnown RBP6.13□□□□□ -1.43
SPTBN1-201ENST00000333896 KRTAP10-3P60369 221 aa6.12□□□□□ -1.43
SPTBN1-201ENST00000333896 KRTAP11-1Q8IUC1 163 aa6.1□□□□□ -1.43
SPTBN1-201ENST00000333896 Q5VSD8 79 aa6.09□□□□□ -1.43
SPTBN1-201ENST00000333896 PDZD2O15018 2839 aa6.08□□□□□ -1.44
SPTBN1-201ENST00000333896 PLAC8Q9NZF1 115 aa6.08□□□□□ -1.44
SPTBN1-201ENST00000333896 ZFHX3Q15911 3703 aa6.07□□□□□ -1.44
SPTBN1-201ENST00000333896 A8MU10 97 aa6.07□□□□□ -1.44
SPTBN1-201ENST00000333896 ASH1LQ9NR48 2969 aaKnown RBP6.07□□□□□ -1.44
SPTBN1-201ENST00000333896 CRYBG3Q68DQ2 2970 aa6.07□□□□□ -1.44
SPTBN1-201ENST00000333896 FREM2Q5SZK8 3169 aa6.06□□□□□ -1.44
SPTBN1-201ENST00000333896 SRRM2Q9UQ35 2752 aaKnown RBP6.05□□□□□ -1.44
SPTBN1-201ENST00000333896 PRUNE2Q8WUY3 3088 aa6.02□□□□□ -1.45
SPTBN1-201ENST00000333896 WDFY4Q6ZS81 3184 aa6.02□□□□□ -1.45
SPTBN1-201ENST00000333896 DMXL2Q8TDJ6 3036 aa5.99□□□□□ -1.45
SPTBN1-201ENST00000333896 TGP01266 2768 aa5.98□□□□□ -1.45
SPTBN1-201ENST00000333896 ZZEF1O43149 2961 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms