RNA–Protein interactions for RNA: ENST00000330871.3

SOCS3-201, Transcript of suppressor of cytokine signaling 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3-201ENST00000330871 A6NN06 94 aa11.62□□□□□ -0.55
SOCS3-201ENST00000330871 IGKV2D-24A0A075B6R9 120 aa11.61□□□□□ -0.55
SOCS3-201ENST00000330871 SPANXA2-OT1Q8N9U9 137 aa11.6□□□□□ -0.55
SOCS3-201ENST00000330871 Q75L30 129 aa11.6□□□□□ -0.55
SOCS3-201ENST00000330871 A0A087WSZ3 146 aa11.59□□□□□ -0.55
SOCS3-201ENST00000330871 IGLV1-50A0A075B6I6 118 aa11.58□□□□□ -0.56
SOCS3-201ENST00000330871 ATRQ13535 2644 aa11.58□□□□□ -0.56
SOCS3-201ENST00000330871 IGFL1Q6UW32 110 aa11.58□□□□□ -0.56
SOCS3-201ENST00000330871 NDUFS5O43920 106 aa11.57□□□□□ -0.56
SOCS3-201ENST00000330871 COA5Q86WW8 74 aa11.57□□□□□ -0.56
SOCS3-201ENST00000330871 KRTAP29-1A8MX34 341 aaPredicted RBP11.56□□□□□ -0.56
SOCS3-201ENST00000330871 FLNBO75369 2602 aaKnown RBP11.55□□□□□ -0.56
SOCS3-201ENST00000330871 PHF5AQ7RTV0 110 aaKnown RBP11.55□□□□□ -0.56
SOCS3-201ENST00000330871 CASC2Q6XLA1 102 aa11.54□□□□□ -0.56
SOCS3-201ENST00000330871 SPRR1AP35321 89 aa11.54□□□□□ -0.56
SOCS3-201ENST00000330871 LOC101927531A0A1B0GV80 90 aa11.53□□□□□ -0.56
SOCS3-201ENST00000330871 C9orf163Q8N9P6 203 aa11.52□□□□□ -0.56
SOCS3-201ENST00000330871 KRTAP7-1Q8IUC3 87 aa11.52□□□□□ -0.57
SOCS3-201ENST00000330871 LINC01556Q5JQF7 62 aa11.51□□□□□ -0.57
SOCS3-201ENST00000330871 CDC42SE1Q9NRR8 79 aa11.51□□□□□ -0.57
SOCS3-201ENST00000330871 SPAG11AQ6PDA7 123 aa11.51□□□□□ -0.57
SOCS3-201ENST00000330871 MOBPQ13875 183 aa11.5□□□□□ -0.57
SOCS3-201ENST00000330871 C11orf45Q8TAV5 145 aa11.49□□□□□ -0.57
SOCS3-201ENST00000330871 CNBPP62633 177 aaKnown RBP11.49□□□□□ -0.57
SOCS3-201ENST00000330871 INAFM1C9JVW0 142 aa11.48□□□□□ -0.57
SOCS3-201ENST00000330871 PCOTHQ58A44 107 aa11.48□□□□□ -0.57
SOCS3-201ENST00000330871 C7orf65Q6ZTY9 151 aa11.48□□□□□ -0.57
SOCS3-201ENST00000330871 PLA2G2DQ9UNK4 145 aa11.48□□□□□ -0.57
SOCS3-201ENST00000330871 H3BPC8 53 aa11.47□□□□□ -0.57
SOCS3-201ENST00000330871 TLX1NBP0CAT3 122 aa11.47□□□□□ -0.57
SOCS3-201ENST00000330871 SRRM2Q9UQ35 2752 aaKnown RBP11.47□□□□□ -0.57
SOCS3-201ENST00000330871 CSMD3Q7Z407 3707 aa11.45□□□□□ -0.58
SOCS3-201ENST00000330871 TENM3Q9P273 2699 aa11.45□□□□□ -0.58
SOCS3-201ENST00000330871 SPINK7P58062 85 aa11.43□□□□□ -0.58
SOCS3-201ENST00000330871 PRLHP81277 87 aa11.42□□□□□ -0.58
SOCS3-201ENST00000330871 IGLV7-46A0A075B6I9 117 aa11.42□□□□□ -0.58
SOCS3-201ENST00000330871 IGLV5-37A0A075B6J1 123 aa11.42□□□□□ -0.58
SOCS3-201ENST00000330871 REG3GQ6UW15 175 aa11.41□□□□□ -0.58
SOCS3-201ENST00000330871 DEFB131BA0A096LNP1 70 aa11.4□□□□□ -0.58
SOCS3-201ENST00000330871 FBN1P35555 2871 aaKnown RBP11.4□□□□□ -0.58
SOCS3-201ENST00000330871 CASC10Q5T4H9 136 aa11.4□□□□□ -0.58
SOCS3-201ENST00000330871 DNAH10OSP0CZ25 163 aa11.39□□□□□ -0.59
SOCS3-201ENST00000330871 OXLD1Q5BKU9 147 aa11.37□□□□□ -0.59
SOCS3-201ENST00000330871 LINC01558Q9Y6Z2 57 aa11.37□□□□□ -0.59
SOCS3-201ENST00000330871 A8MWP4 228 aa11.36□□□□□ -0.59
SOCS3-201ENST00000330871 H0Y9J4 135 aa11.36□□□□□ -0.59
SOCS3-201ENST00000330871 KRTAP10-11P60412 298 aa11.34□□□□□ -0.59
SOCS3-201ENST00000330871 C8orf87E5RJ46 101 aa11.34□□□□□ -0.59
SOCS3-201ENST00000330871 PLAC8Q9NZF1 115 aa11.33□□□□□ -0.6
SOCS3-201ENST00000330871 NSD1Q96L73 2696 aaPredicted RBP11.33□□□□□ -0.6
SOCS3-201ENST00000330871 PRAC1Q96KF2 57 aa11.32□□□□□ -0.6
SOCS3-201ENST00000330871 ANK2Q01484 3957 aa11.32□□□□□ -0.6
SOCS3-201ENST00000330871 C4orf48Q5BLP8 95 aa11.32□□□□□ -0.6
SOCS3-201ENST00000330871 A0A096LNI7 61 aa11.31□□□□□ -0.6
SOCS3-201ENST00000330871 LINC00472Q9H8W2 130 aa11.31□□□□□ -0.6
SOCS3-201ENST00000330871 IGLV8-61A0A075B6I0 122 aa11.3□□□□□ -0.6
SOCS3-201ENST00000330871 MMP24-AS1A0A0U1RRL7 71 aa11.3□□□□□ -0.6
SOCS3-201ENST00000330871 MAST4O15021 2626 aa11.29□□□□□ -0.6
SOCS3-201ENST00000330871 LINC00313P59037 77 aa11.28□□□□□ -0.6
SOCS3-201ENST00000330871 HRES1P13985 223 aa11.26□□□□□ -0.61
SOCS3-201ENST00000330871 NOTCH1P46531 2555 aa11.26□□□□□ -0.61
SOCS3-201ENST00000330871 COL7A1Q02388 2944 aa11.26□□□□□ -0.61
SOCS3-201ENST00000330871 TENM2Q9NT68 2774 aa11.25□□□□□ -0.61
SOCS3-201ENST00000330871 ADM2Q7Z4H4 148 aa11.25□□□□□ -0.61
SOCS3-201ENST00000330871 IGKV2-24A0A0C4DH68 120 aa11.24□□□□□ -0.61
SOCS3-201ENST00000330871 COL6A5A8TX70 2615 aa11.22□□□□□ -0.61
SOCS3-201ENST00000330871 PRR26Q8N8Z3 221 aa11.18□□□□□ -0.62
SOCS3-201ENST00000330871 KRTAP11-1Q8IUC1 163 aa11.15□□□□□ -0.63
SOCS3-201ENST00000330871 STAB1Q9NY15 2570 aa11.13□□□□□ -0.63
SOCS3-201ENST00000330871 LYSTQ99698 3801 aa11.12□□□□□ -0.63
SOCS3-201ENST00000330871 NBEAL1Q6ZS30 2694 aa11.12□□□□□ -0.63
SOCS3-201ENST00000330871 TP53AIP1Q9HCN2 124 aa11.12□□□□□ -0.63
SOCS3-201ENST00000330871 DNAH1Q9P2D7 4330 aa11.11□□□□□ -0.63
SOCS3-201ENST00000330871 Q6ZR54 194 aa11.11□□□□□ -0.63
SOCS3-201ENST00000330871 DNAH10Q8IVF4 4471 aa11.09□□□□□ -0.63
SOCS3-201ENST00000330871 C8orf17Q9NRJ1 99 aa11.08□□□□□ -0.64
SOCS3-201ENST00000330871 IGHV6-1A0A0B4J1U7 121 aa11.08□□□□□ -0.64
SOCS3-201ENST00000330871 H3BS24 57 aa11.07□□□□□ -0.64
SOCS3-201ENST00000330871 ASB16-AS1Q495Z4 193 aa11.07□□□□□ -0.64
SOCS3-201ENST00000330871 K7EIL1 84 aa11.06□□□□□ -0.64
SOCS3-201ENST00000330871 LINC01554Q52M75 96 aa11.06□□□□□ -0.64
SOCS3-201ENST00000330871 Q96NJ1 140 aa11.06□□□□□ -0.64
SOCS3-201ENST00000330871 SPRR1BP22528 89 aa11.05□□□□□ -0.64
SOCS3-201ENST00000330871 CHTF8P0CG12 524 aa11.04□□□□□ -0.64
SOCS3-201ENST00000330871 MDFIQ99750 246 aa11.02□□□□□ -0.65
SOCS3-201ENST00000330871 IGLV9-49A0A0B4J1Y8 123 aa11.01□□□□□ -0.65
SOCS3-201ENST00000330871 PLA2G1BP04054 148 aaKnown RBP11.01□□□□□ -0.65
SOCS3-201ENST00000330871 A0A087X002 238 aa11□□□□□ -0.65
SOCS3-201ENST00000330871 NOTCH2NLQ7Z3S9 236 aa11□□□□□ -0.65
SOCS3-201ENST00000330871 KRTAP24-1Q3LI83 254 aa10.98□□□□□ -0.65
SOCS3-201ENST00000330871 CMYA5Q8N3K9 4069 aa10.96□□□□□ -0.65
SOCS3-201ENST00000330871 MRPL34Q9BQ48 92 aaKnown RBP10.96□□□□□ -0.65
SOCS3-201ENST00000330871 KRTAP1-5Q9BYS1 174 aa10.96□□□□□ -0.66
SOCS3-201ENST00000330871 A0A1B0GVX0 72 aa10.95□□□□□ -0.66
SOCS3-201ENST00000330871 DNAH3Q8TD57 4116 aa10.93□□□□□ -0.66
SOCS3-201ENST00000330871 Q5W150 140 aa10.92□□□□□ -0.66
SOCS3-201ENST00000330871 RTL8CO15255 209 aa10.91□□□□□ -0.66
SOCS3-201ENST00000330871 CDK2AP2O75956 126 aa10.9□□□□□ -0.66
SOCS3-201ENST00000330871 C14orf177Q52M58 125 aa10.9□□□□□ -0.66
SOCS3-201ENST00000330871 A0A1B0GU69 56 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms