RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 C22orf24Q9Y442 160 aa3.83□□□□□ -1.8
SMG1-201ENST00000330588 FAT1Q14517 4588 aa3.83□□□□□ -1.8
SMG1-201ENST00000330588 ZNF861PO60384 105 aa3.82□□□□□ -1.8
SMG1-201ENST00000330588 SERF1AO75920 110 aa3.82□□□□□ -1.8
SMG1-201ENST00000330588 KRTAP11-1Q8IUC1 163 aa3.82□□□□□ -1.8
SMG1-201ENST00000330588 PCP2Q8IVA1 136 aa3.82□□□□□ -1.8
SMG1-201ENST00000330588 PKHD1L1Q86WI1 4243 aa3.81□□□□□ -1.8
SMG1-201ENST00000330588 NDUFS5O43920 106 aa3.81□□□□□ -1.8
SMG1-201ENST00000330588 KRTAP1-4P0C5Y4 121 aa3.81□□□□□ -1.8
SMG1-201ENST00000330588 COX8AP10176 69 aa3.81□□□□□ -1.8
SMG1-201ENST00000330588 SEC61BP60468 96 aaKnown RBP3.81□□□□□ -1.8
SMG1-201ENST00000330588 C2orf91Q6ZV80 131 aa3.81□□□□□ -1.8
SMG1-201ENST00000330588 BCE1O60756 84 aa3.8□□□□□ -1.8
SMG1-201ENST00000330588 RPL28P46779 137 aaKnown RBP3.8□□□□□ -1.8
SMG1-201ENST00000330588 NPC2P61916 151 aa3.8□□□□□ -1.8
SMG1-201ENST00000330588 IFI27L1Q96BM0 104 aa3.8□□□□□ -1.8
SMG1-201ENST00000330588 ZNF625Q96I27 306 aaPredicted RBP3.8□□□□□ -1.8
SMG1-201ENST00000330588 XAGE1AQ9HD64 81 aa3.8□□□□□ -1.8
SMG1-201ENST00000330588 MYCBP2O75592 4640 aa3.8□□□□□ -1.8
SMG1-201ENST00000330588 C11orf86A6NJI1 115 aa3.8□□□□□ -1.8
SMG1-201ENST00000330588 TCL1BO95988 128 aa3.8□□□□□ -1.8
SMG1-201ENST00000330588 IGKCP01834 107 aa3.8□□□□□ -1.8
SMG1-201ENST00000330588 BAGE3Q86Y29 109 aa3.8□□□□□ -1.8
SMG1-201ENST00000330588 CEND1Q8N111 149 aa3.8□□□□□ -1.8
SMG1-201ENST00000330588 NKAPP1Q8N9T2 125 aa3.8□□□□□ -1.8
SMG1-201ENST00000330588 TMEM223A0PJW6 202 aa3.79□□□□□ -1.8
SMG1-201ENST00000330588 ATOX1O00244 68 aa3.79□□□□□ -1.8
SMG1-201ENST00000330588 TMEM170BQ5T4T1 132 aa3.79□□□□□ -1.8
SMG1-201ENST00000330588 LINC00167Q96N53 147 aa3.79□□□□□ -1.8
SMG1-201ENST00000330588 DSCR8Q96T75 97 aa3.79□□□□□ -1.8
SMG1-201ENST00000330588 KRTAP13-1Q8IUC0 172 aa3.78□□□□□ -1.8
SMG1-201ENST00000330588 SND1-IT1Q9HBX3 110 aa3.78□□□□□ -1.8
SMG1-201ENST00000330588 HIGD1BQ9P298 99 aa3.78□□□□□ -1.8
SMG1-201ENST00000330588 FAM229BQ4G0N7 80 aa3.77□□□□□ -1.81
SMG1-201ENST00000330588 LOC107984156A0A0G2JMH3 177 aa3.76□□□□□ -1.81
SMG1-201ENST00000330588 PLNP26678 52 aa3.76□□□□□ -1.81
SMG1-201ENST00000330588 HIST1H4AP62805 103 aaKnown RBP3.76□□□□□ -1.81
SMG1-201ENST00000330588 FP248Q71RG6 208 aaPredicted RBP3.76□□□□□ -1.81
SMG1-201ENST00000330588 ARL17AQ8IVW1 177 aa3.76□□□□□ -1.81
SMG1-201ENST00000330588 IGKV2D-30A0A075B6S6 120 aa3.76□□□□□ -1.81
SMG1-201ENST00000330588 IGKV2D-26A0A0A0MRZ7 120 aa3.76□□□□□ -1.81
SMG1-201ENST00000330588 LGALS3P17931 250 aaKnown RBP3.76□□□□□ -1.81
SMG1-201ENST00000330588 MYMXA0A1B0GTQ4 84 aa3.75□□□□□ -1.81
SMG1-201ENST00000330588 hADV29S1A0JD25 119 aa3.75□□□□□ -1.81
SMG1-201ENST00000330588 RPL37AP8A6NKH3 93 aa3.75□□□□□ -1.81
SMG1-201ENST00000330588 M0R378 163 aa3.75□□□□□ -1.81
SMG1-201ENST00000330588 LEPROTL1O95214 131 aa3.75□□□□□ -1.81
SMG1-201ENST00000330588 SCGB1C2P0DMR2 95 aa3.75□□□□□ -1.81
SMG1-201ENST00000330588 UBE2AP49459 152 aa3.75□□□□□ -1.81
SMG1-201ENST00000330588 ATP5EP56381 51 aaPredicted RBP3.75□□□□□ -1.81
SMG1-201ENST00000330588 LEPROTO15243 131 aa3.74□□□□□ -1.81
SMG1-201ENST00000330588 ZNF73O43830 326 aaPredicted RBP3.74□□□□□ -1.81
SMG1-201ENST00000330588 LINC00158P58513 81 aa3.74□□□□□ -1.81
SMG1-201ENST00000330588 Q6ZVQ6 151 aa3.74□□□□□ -1.81
SMG1-201ENST00000330588 NOTCH2NLQ7Z3S9 236 aa3.74□□□□□ -1.81
SMG1-201ENST00000330588 SERP2Q8N6R1 65 aa3.74□□□□□ -1.81
SMG1-201ENST00000330588 TRBV10-2A0A0K0K1G8 114 aa3.73□□□□□ -1.81
SMG1-201ENST00000330588 LST1O00453 97 aa3.73□□□□□ -1.81
SMG1-201ENST00000330588 ACYP1P07311 99 aa3.73□□□□□ -1.81
SMG1-201ENST00000330588 HERVK_113P61574 105 aa3.73□□□□□ -1.81
SMG1-201ENST00000330588 LCA10Q71F78 164 aa3.73□□□□□ -1.81
SMG1-201ENST00000330588 FAM19A2Q8N3H0 131 aa3.73□□□□□ -1.81
SMG1-201ENST00000330588 NDUFA12Q9UI09 145 aa3.73□□□□□ -1.81
SMG1-201ENST00000330588 LRP1Q07954 4544 aaKnown RBP3.72□□□□□ -1.81
SMG1-201ENST00000330588 IGKV2-28A0A075B6P5 120 aa3.72□□□□□ -1.81
SMG1-201ENST00000330588 A8MUN3 132 aa3.72□□□□□ -1.81
SMG1-201ENST00000330588 IGKV2D-28P01615 120 aa3.72□□□□□ -1.81
SMG1-201ENST00000330588 SPRR1AP35321 89 aa3.72□□□□□ -1.81
SMG1-201ENST00000330588 LINC00337Q8N6G1 96 aa3.72□□□□□ -1.81
SMG1-201ENST00000330588 KCNQ1DNQ9H478 68 aa3.72□□□□□ -1.81
SMG1-201ENST00000330588 HERC1Q15751 4861 aa3.72□□□□□ -1.81
SMG1-201ENST00000330588 A0A087X002 238 aa3.72□□□□□ -1.81
SMG1-201ENST00000330588 PSMB2P49721 201 aa3.72□□□□□ -1.81
SMG1-201ENST00000330588 MIR7-3HGQ8N6C7 128 aa3.72□□□□□ -1.81
SMG1-201ENST00000330588 Q8NDZ9 215 aa3.72□□□□□ -1.81
SMG1-201ENST00000330588 TYMSOSQ8TAI1 123 aa3.72□□□□□ -1.81
SMG1-201ENST00000330588 ZNF706Q9Y5V0 76 aaPredicted RBP3.72□□□□□ -1.81
SMG1-201ENST00000330588 FAT3Q8TDW7 4589 aa3.71□□□□□ -1.82
SMG1-201ENST00000330588 MP68P56378 58 aa3.71□□□□□ -1.82
SMG1-201ENST00000330588 KRTAP4-16G5E9R7 235 aaPredicted RBP3.7□□□□□ -1.82
SMG1-201ENST00000330588 TMEM256-PLSCR3K7ERE1 68 aa3.7□□□□□ -1.82
SMG1-201ENST00000330588 KRTAP13-2Q52LG2 175 aa3.7□□□□□ -1.82
SMG1-201ENST00000330588 PSPHP1O15172 72 aa3.69□□□□□ -1.82
SMG1-201ENST00000330588 TIMM17BO60830 172 aa3.69□□□□□ -1.82
SMG1-201ENST00000330588 TSPEAR-AS2P59090 65 aa3.69□□□□□ -1.82
SMG1-201ENST00000330588 PRLHP81277 87 aa3.69□□□□□ -1.82
SMG1-201ENST00000330588 KRTAP5-4Q6L8H1 288 aa3.69□□□□□ -1.82
SMG1-201ENST00000330588 SPAG11AQ6PDA7 123 aa3.69□□□□□ -1.82
SMG1-201ENST00000330588 LINC00643Q86TS7 51 aa3.69□□□□□ -1.82
SMG1-201ENST00000330588 SPRR4Q96PI1 79 aa3.69□□□□□ -1.82
SMG1-201ENST00000330588 LINC00313P59037 77 aa3.68□□□□□ -1.82
SMG1-201ENST00000330588 LINC00304Q8N9R0 145 aa3.68□□□□□ -1.82
SMG1-201ENST00000330588 TNXBP22105 4242 aa3.68□□□□□ -1.82
SMG1-201ENST00000330588 TRBV10-3A0A0K0K1G6 114 aa3.68□□□□□ -1.82
SMG1-201ENST00000330588 ETDCA0A1B0GVM5 59 aa3.68□□□□□ -1.82
SMG1-201ENST00000330588 IGLV6-57P01721 117 aa3.68□□□□□ -1.82
SMG1-201ENST00000330588 LINC00483Q53H64 154 aa3.68□□□□□ -1.82
SMG1-201ENST00000330588 A0A0J9YXY3 114 aa3.67□□□□□ -1.82
SMG1-201ENST00000330588 NCR3O14931 201 aa3.67□□□□□ -1.82
SMG1-201ENST00000330588 FXYD2P54710 66 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms