RNA–Protein interactions for RNA: ENST00000321337.11

SENP3-201, Transcript of SUMO specific peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SENP3, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-201ENST00000321337 A0A087WSZ3 146 aa15.93■□□□□ 0.14
SENP3-201ENST00000321337 FBN1P35555 2871 aaKnown RBP15.93■□□□□ 0.14
SENP3-201ENST00000321337 LYSTQ99698 3801 aa15.92■□□□□ 0.14
SENP3-201ENST00000321337 IGKV2-24A0A0C4DH68 120 aa15.91■□□□□ 0.14
SENP3-201ENST00000321337 A0A096LNI7 61 aa15.88■□□□□ 0.13
SENP3-201ENST00000321337 DNAH3Q8TD57 4116 aa15.88■□□□□ 0.13
SENP3-201ENST00000321337 CSMD3Q7Z407 3707 aa15.86■□□□□ 0.13
SENP3-201ENST00000321337 PSPHP1O15172 72 aa15.84■□□□□ 0.13
SENP3-201ENST00000321337 KRTAP11-1Q8IUC1 163 aa15.83■□□□□ 0.12
SENP3-201ENST00000321337 Q1T7F1 81 aa15.81■□□□□ 0.12
SENP3-201ENST00000321337 LINC00208Q96KT6 92 aa15.79■□□□□ 0.12
SENP3-201ENST00000321337 CYP4F30PQ9H0H9 118 aa15.79■□□□□ 0.12
SENP3-201ENST00000321337 KRTAP1-5Q9BYS1 174 aa15.79■□□□□ 0.12
SENP3-201ENST00000321337 C1orf195Q5TG92 126 aa15.78■□□□□ 0.12
SENP3-201ENST00000321337 HUWE1Q7Z6Z7 4374 aaKnown RBP15.77■□□□□ 0.12
SENP3-201ENST00000321337 COL6A5A8TX70 2615 aa15.77■□□□□ 0.12
SENP3-201ENST00000321337 TRAV22A0A0B4J277 110 aa15.77■□□□□ 0.11
SENP3-201ENST00000321337 KRTAP29-1A8MX34 341 aaPredicted RBP15.77■□□□□ 0.11
SENP3-201ENST00000321337 IGLV8-61A0A075B6I0 122 aa15.76■□□□□ 0.11
SENP3-201ENST00000321337 UBE2AP49459 152 aa15.76■□□□□ 0.11
SENP3-201ENST00000321337 NBEAL1Q6ZS30 2694 aa15.75■□□□□ 0.11
SENP3-201ENST00000321337 DNAH9Q9NYC9 4486 aa15.75■□□□□ 0.11
SENP3-201ENST00000321337 KRTAP24-1Q3LI83 254 aa15.75■□□□□ 0.11
SENP3-201ENST00000321337 CHTF8P0CG12 524 aa15.74■□□□□ 0.11
SENP3-201ENST00000321337 MP68P56378 58 aa15.73■□□□□ 0.11
SENP3-201ENST00000321337 PHF5AQ7RTV0 110 aaKnown RBP15.72■□□□□ 0.11
SENP3-201ENST00000321337 C16orf90A8MZG2 172 aa15.72■□□□□ 0.11
SENP3-201ENST00000321337 CNBPP62633 177 aaKnown RBP15.71■□□□□ 0.11
SENP3-201ENST00000321337 CASC2Q6XLA1 102 aa15.68■□□□□ 0.1
SENP3-201ENST00000321337 H0Y9P7 68 aa15.67■□□□□ 0.1
SENP3-201ENST00000321337 A8MUN3 132 aa15.67■□□□□ 0.1
SENP3-201ENST00000321337 NDUFB1O75438 58 aa15.66■□□□□ 0.1
SENP3-201ENST00000321337 PRR15Q8IV56 129 aa15.65■□□□□ 0.1
SENP3-201ENST00000321337 B9D2Q9BPU9 175 aa15.65■□□□□ 0.1
SENP3-201ENST00000321337 A8MU10 97 aa15.64■□□□□ 0.09
SENP3-201ENST00000321337 LINC00472Q9H8W2 130 aa15.63■□□□□ 0.09
SENP3-201ENST00000321337 A8MWP4 228 aa15.58■□□□□ 0.08
SENP3-201ENST00000321337 COL7A1Q02388 2944 aa15.56■□□□□ 0.08
SENP3-201ENST00000321337 SPRR1BP22528 89 aa15.53■□□□□ 0.08
SENP3-201ENST00000321337 DNAH7Q8WXX0 4024 aa15.53■□□□□ 0.08
SENP3-201ENST00000321337 H0Y9J4 135 aa15.53■□□□□ 0.08
SENP3-201ENST00000321337 Q5VV11 94 aa15.53■□□□□ 0.08
SENP3-201ENST00000321337 K7EIL1 84 aa15.52■□□□□ 0.08
SENP3-201ENST00000321337 V9GYY9 64 aa15.51■□□□□ 0.07
SENP3-201ENST00000321337 TENM2Q9NT68 2774 aa15.51■□□□□ 0.07
SENP3-201ENST00000321337 STAB2Q8WWQ8 2551 aa15.51■□□□□ 0.07
SENP3-201ENST00000321337 C9orf163Q8N9P6 203 aa15.5■□□□□ 0.07
SENP3-201ENST00000321337 MMP24-AS1A0A0U1RRL7 71 aa15.49■□□□□ 0.07
SENP3-201ENST00000321337 PANO1I0J062 215 aa15.49■□□□□ 0.07
SENP3-201ENST00000321337 SPANXA2-OT1Q8N9U9 137 aa15.49■□□□□ 0.07
SENP3-201ENST00000321337 Q8N9P0 234 aaPredicted RBP15.48■□□□□ 0.07
SENP3-201ENST00000321337 H3BPC8 53 aa15.44■□□□□ 0.06
SENP3-201ENST00000321337 PCOTHQ58A44 107 aa15.41■□□□□ 0.06
SENP3-201ENST00000321337 UBE2DNLQ8IWF7 75 aa15.4■□□□□ 0.06
SENP3-201ENST00000321337 PRR15LQ9BU68 103 aa15.39■□□□□ 0.05
SENP3-201ENST00000321337 IGLV9-49A0A0B4J1Y8 123 aa15.39■□□□□ 0.05
SENP3-201ENST00000321337 Q96NJ1 140 aa15.38■□□□□ 0.05
SENP3-201ENST00000321337 CHKB-CPT1BH3BT56 60 aa15.37■□□□□ 0.05
SENP3-201ENST00000321337 PMAIP1Q13794 54 aa15.37■□□□□ 0.05
SENP3-201ENST00000321337 COA5Q86WW8 74 aa15.36■□□□□ 0.05
SENP3-201ENST00000321337 KRTAP13-1Q8IUC0 172 aa15.35■□□□□ 0.05
SENP3-201ENST00000321337 MGAM2Q2M2H8 2515 aa15.35■□□□□ 0.05
SENP3-201ENST00000321337 CD164Q04900 197 aa15.32■□□□□ 0.04
SENP3-201ENST00000321337 APLNQ9ULZ1 77 aa15.31■□□□□ 0.04
SENP3-201ENST00000321337 IGLV7-46A0A075B6I9 117 aa15.3■□□□□ 0.04
SENP3-201ENST00000321337 SEC61GP60059 68 aa15.3■□□□□ 0.04
SENP3-201ENST00000321337 LIMD2Q9BT23 127 aa15.3■□□□□ 0.04
SENP3-201ENST00000321337 C14orf177Q52M58 125 aa15.29■□□□□ 0.04
SENP3-201ENST00000321337 MOBPQ13875 183 aa15.27■□□□□ 0.04
SENP3-201ENST00000321337 PLECQ15149 4684 aaKnown RBP15.27■□□□□ 0.03
SENP3-201ENST00000321337 ASB16-AS1Q495Z4 193 aa15.26■□□□□ 0.03
SENP3-201ENST00000321337 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.26■□□□□ 0.03
SENP3-201ENST00000321337 C8orf17Q9NRJ1 99 aa15.24■□□□□ 0.03
SENP3-201ENST00000321337 IGHV6-1A0A0B4J1U7 121 aa15.23■□□□□ 0.03
SENP3-201ENST00000321337 LCA10Q71F78 164 aa15.23■□□□□ 0.03
SENP3-201ENST00000321337 ANAPC11Q9NYG5 84 aa15.23■□□□□ 0.03
SENP3-201ENST00000321337 FRAS1Q86XX4 4008 aa15.21■□□□□ 0.03
SENP3-201ENST00000321337 A0A087X002 238 aa15.21■□□□□ 0.03
SENP3-201ENST00000321337 NDUFS5O43920 106 aa15.21■□□□□ 0.03
SENP3-201ENST00000321337 NOTCH2NLQ7Z3S9 236 aa15.21■□□□□ 0.03
SENP3-201ENST00000321337 DYNC2H1Q8NCM8 4307 aaKnown RBP15.19■□□□□ 0.02
SENP3-201ENST00000321337 SPTSSBQ8NFR3 76 aa15.17■□□□□ 0.02
SENP3-201ENST00000321337 SPAG11AQ6PDA7 123 aa15.16■□□□□ 0.02
SENP3-201ENST00000321337 Q6ZR54 194 aa15.15■□□□□ 0.02
SENP3-201ENST00000321337 Q75L30 129 aa15.15■□□□□ 0.02
SENP3-201ENST00000321337 Q6ZRN7 208 aaPredicted RBP15.15■□□□□ 0.02
SENP3-201ENST00000321337 LOC101927531A0A1B0GV80 90 aa15.14■□□□□ 0.01
SENP3-201ENST00000321337 A6NED7 52 aa15.14■□□□□ 0.01
SENP3-201ENST00000321337 TP53AIP1Q9HCN2 124 aa15.14■□□□□ 0.01
SENP3-201ENST00000321337 NBDYA0A0U1RRE5 68 aa15.13■□□□□ 0.01
SENP3-201ENST00000321337 A0A1B0GVX0 72 aa15.13■□□□□ 0.01
SENP3-201ENST00000321337 DNAH8Q96JB1 4490 aa15.12■□□□□ 0.01
SENP3-201ENST00000321337 SPACA4Q8TDM5 124 aa15.12■□□□□ 0.01
SENP3-201ENST00000321337 WWC2-AS2Q96NR7 200 aa15.1■□□□□ 0.01
SENP3-201ENST00000321337 LINC00483Q53H64 154 aa15.09■□□□□ 0.01
SENP3-201ENST00000321337 HRES1P13985 223 aa15.08■□□□□ 0
SENP3-201ENST00000321337 MRPL34Q9BQ48 92 aaKnown RBP15.05■□□□□ 0
SENP3-201ENST00000321337 HECTD4Q9Y4D8 3996 aa15.05■□□□□ 0
SENP3-201ENST00000321337 MDFIQ99750 246 aa15.05■□□□□ -0
SENP3-201ENST00000321337 PSORS1C2Q9UIG4 136 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms