RNA–Protein interactions for RNA: ENST00000317243.9

ZNF554-201, Transcript of zinc finger protein 554, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF554, Length 2,736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-201ENST00000317243 A8MU10 97 aa12.4□□□□□ -0.42
ZNF554-201ENST00000317243 Q6ZRX8 168 aa12.39□□□□□ -0.43
ZNF554-201ENST00000317243 A8MUN3 132 aa12.39□□□□□ -0.43
ZNF554-201ENST00000317243 PSCAO43653 123 aa12.37□□□□□ -0.43
ZNF554-201ENST00000317243 MDFIQ99750 246 aa12.37□□□□□ -0.43
ZNF554-201ENST00000317243 DHRS4-AS1Q9P1J3 65 aa12.37□□□□□ -0.43
ZNF554-201ENST00000317243 Q8NBF4 154 aa12.36□□□□□ -0.43
ZNF554-201ENST00000317243 PRKDCP78527 4128 aaKnown RBP12.35□□□□□ -0.43
ZNF554-201ENST00000317243 DEFB116Q30KQ4 102 aa12.35□□□□□ -0.43
ZNF554-201ENST00000317243 CYP4F30PQ9H0H9 118 aa12.34□□□□□ -0.43
ZNF554-201ENST00000317243 IGLV1-50A0A075B6I6 118 aa12.33□□□□□ -0.44
ZNF554-201ENST00000317243 A0A0G2JQZ4 141 aa12.33□□□□□ -0.44
ZNF554-201ENST00000317243 A0A1W2PNN7 141 aa12.33□□□□□ -0.44
ZNF554-201ENST00000317243 STARD9Q9P2P6 4700 aa12.33□□□□□ -0.44
ZNF554-201ENST00000317243 UBE2BP63146 152 aa12.32□□□□□ -0.44
ZNF554-201ENST00000317243 TNP2Q05952 138 aa12.32□□□□□ -0.44
ZNF554-201ENST00000317243 HCG22E2RYF7 251 aa12.31□□□□□ -0.44
ZNF554-201ENST00000317243 A0A1B0GW54 56 aa12.31□□□□□ -0.44
ZNF554-201ENST00000317243 KRTAP4-16G5E9R7 235 aaPredicted RBP12.31□□□□□ -0.44
ZNF554-201ENST00000317243 SPRR4Q96PI1 79 aa12.3□□□□□ -0.44
ZNF554-201ENST00000317243 WFDC13Q8IUB5 93 aa12.29□□□□□ -0.44
ZNF554-201ENST00000317243 DNHD1Q96M86 4753 aa12.27□□□□□ -0.45
ZNF554-201ENST00000317243 IGKV2-24A0A0C4DH68 120 aa12.26□□□□□ -0.45
ZNF554-201ENST00000317243 Q5VV11 94 aa12.26□□□□□ -0.45
ZNF554-201ENST00000317243 DYNC2H1Q8NCM8 4307 aaKnown RBP12.26□□□□□ -0.45
ZNF554-201ENST00000317243 SPRR1AP35321 89 aa12.25□□□□□ -0.45
ZNF554-201ENST00000317243 MRPL55Q7Z7F7 128 aaKnown RBP12.25□□□□□ -0.45
ZNF554-201ENST00000317243 TLX1NBP0CAT3 122 aa12.25□□□□□ -0.45
ZNF554-201ENST00000317243 LINC00208Q96KT6 92 aa12.24□□□□□ -0.45
ZNF554-201ENST00000317243 NDUFB1O75438 58 aa12.24□□□□□ -0.45
ZNF554-201ENST00000317243 B9D2Q9BPU9 175 aa12.24□□□□□ -0.45
ZNF554-201ENST00000317243 PLA2G2DQ9UNK4 145 aa12.23□□□□□ -0.45
ZNF554-201ENST00000317243 MP68P56378 58 aa12.22□□□□□ -0.45
ZNF554-201ENST00000317243 MEGF8Q7Z7M0 2845 aa12.21□□□□□ -0.45
ZNF554-201ENST00000317243 LINC00476Q8WZB0 136 aa12.21□□□□□ -0.45
ZNF554-201ENST00000317243 CHKB-CPT1BH3BT56 60 aa12.21□□□□□ -0.46
ZNF554-201ENST00000317243 A0A096LNI7 61 aa12.2□□□□□ -0.46
ZNF554-201ENST00000317243 KMT2AQ03164 3969 aa12.2□□□□□ -0.46
ZNF554-201ENST00000317243 CHTF8P0CG12 524 aa12.19□□□□□ -0.46
ZNF554-201ENST00000317243 UBE2DNLQ8IWF7 75 aa12.19□□□□□ -0.46
ZNF554-201ENST00000317243 IGLV5-37A0A075B6J1 123 aa12.18□□□□□ -0.46
ZNF554-201ENST00000317243 REG3GQ6UW15 175 aa12.18□□□□□ -0.46
ZNF554-201ENST00000317243 RPL37AP61513 92 aaKnown RBP12.17□□□□□ -0.46
ZNF554-201ENST00000317243 PRLHP81277 87 aa12.17□□□□□ -0.46
ZNF554-201ENST00000317243 Q8N9P0 234 aaPredicted RBP12.17□□□□□ -0.46
ZNF554-201ENST00000317243 APLNQ9ULZ1 77 aa12.17□□□□□ -0.46
ZNF554-201ENST00000317243 TGP01266 2768 aa12.16□□□□□ -0.46
ZNF554-201ENST00000317243 C16orf90A8MZG2 172 aa12.15□□□□□ -0.46
ZNF554-201ENST00000317243 CD164Q04900 197 aa12.15□□□□□ -0.46
ZNF554-201ENST00000317243 PRR15LQ9BU68 103 aa12.15□□□□□ -0.46
ZNF554-201ENST00000317243 IGFL1Q6UW32 110 aa12.15□□□□□ -0.47
ZNF554-201ENST00000317243 SPTSSBQ8NFR3 76 aa12.15□□□□□ -0.47
ZNF554-201ENST00000317243 KRTAP11-1Q8IUC1 163 aa12.14□□□□□ -0.47
ZNF554-201ENST00000317243 A0A087WSZ3 146 aa12.13□□□□□ -0.47
ZNF554-201ENST00000317243 UBE2AP49459 152 aa12.12□□□□□ -0.47
ZNF554-201ENST00000317243 H0Y9P7 68 aa12.11□□□□□ -0.47
ZNF554-201ENST00000317243 LIMD2Q9BT23 127 aa12.09□□□□□ -0.47
ZNF554-201ENST00000317243 DNAH2Q9P225 4427 aa12.08□□□□□ -0.48
ZNF554-201ENST00000317243 VPS13DQ5THJ4 4388 aa12.07□□□□□ -0.48
ZNF554-201ENST00000317243 KRTAP29-1A8MX34 341 aaPredicted RBP12.06□□□□□ -0.48
ZNF554-201ENST00000317243 LCA10Q71F78 164 aa12.06□□□□□ -0.48
ZNF554-201ENST00000317243 PHF5AQ7RTV0 110 aaKnown RBP12.06□□□□□ -0.48
ZNF554-201ENST00000317243 FRAS1Q86XX4 4008 aa12.06□□□□□ -0.48
ZNF554-201ENST00000317243 PANO1I0J062 215 aa12.06□□□□□ -0.48
ZNF554-201ENST00000317243 SPANXA2-OT1Q8N9U9 137 aa12.06□□□□□ -0.48
ZNF554-201ENST00000317243 HECTD4Q9Y4D8 3996 aa12.05□□□□□ -0.48
ZNF554-201ENST00000317243 CASC2Q6XLA1 102 aa12.04□□□□□ -0.48
ZNF554-201ENST00000317243 KTN1-AS1Q86SY8 53 aa12.04□□□□□ -0.48
ZNF554-201ENST00000317243 A6NED7 52 aa12.02□□□□□ -0.48
ZNF554-201ENST00000317243 CNBPP62633 177 aaKnown RBP12.01□□□□□ -0.49
ZNF554-201ENST00000317243 RBM12B-AS1Q9P1G2 102 aa12.01□□□□□ -0.49
ZNF554-201ENST00000317243 FBN3Q75N90 2809 aa12□□□□□ -0.49
ZNF554-201ENST00000317243 COA5Q86WW8 74 aa11.98□□□□□ -0.49
ZNF554-201ENST00000317243 C9orf163Q8N9P6 203 aa11.98□□□□□ -0.49
ZNF554-201ENST00000317243 NBDYA0A0U1RRE5 68 aa11.96□□□□□ -0.49
ZNF554-201ENST00000317243 ATP11AUNQ6ZP68 121 aa11.96□□□□□ -0.49
ZNF554-201ENST00000317243 Q75L30 129 aa11.96□□□□□ -0.49
ZNF554-201ENST00000317243 H3BPC8 53 aa11.95□□□□□ -0.5
ZNF554-201ENST00000317243 Q6ZRN7 208 aaPredicted RBP11.93□□□□□ -0.5
ZNF554-201ENST00000317243 IGLV8-61A0A075B6I0 122 aa11.92□□□□□ -0.5
ZNF554-201ENST00000317243 LOC101927531A0A1B0GV80 90 aa11.92□□□□□ -0.5
ZNF554-201ENST00000317243 A6NN06 94 aa11.91□□□□□ -0.5
ZNF554-201ENST00000317243 PCOTHQ58A44 107 aa11.91□□□□□ -0.5
ZNF554-201ENST00000317243 DNAH8Q96JB1 4490 aa11.89□□□□□ -0.51
ZNF554-201ENST00000317243 A8MWP4 228 aa11.89□□□□□ -0.51
ZNF554-201ENST00000317243 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.88□□□□□ -0.51
ZNF554-201ENST00000317243 DNAH6Q9C0G6 4158 aa11.88□□□□□ -0.51
ZNF554-201ENST00000317243 H0Y9J4 135 aa11.88□□□□□ -0.51
ZNF554-201ENST00000317243 SPAG11AQ6PDA7 123 aa11.88□□□□□ -0.51
ZNF554-201ENST00000317243 DNAH17Q9UFH2 4485 aa11.88□□□□□ -0.51
ZNF554-201ENST00000317243 IGLV7-46A0A075B6I9 117 aa11.87□□□□□ -0.51
ZNF554-201ENST00000317243 LINC00472Q9H8W2 130 aa11.86□□□□□ -0.51
ZNF554-201ENST00000317243 CDC42SE1Q9NRR8 79 aa11.85□□□□□ -0.51
ZNF554-201ENST00000317243 NUPR2A6NF83 97 aa11.85□□□□□ -0.51
ZNF554-201ENST00000317243 NDUFS5O43920 106 aa11.84□□□□□ -0.51
ZNF554-201ENST00000317243 C14orf177Q52M58 125 aa11.82□□□□□ -0.52
ZNF554-201ENST00000317243 MMP24-AS1A0A0U1RRL7 71 aa11.8□□□□□ -0.52
ZNF554-201ENST00000317243 MOBPQ13875 183 aa11.8□□□□□ -0.52
ZNF554-201ENST00000317243 HYDINQ4G0P3 5121 aa11.78□□□□□ -0.52
ZNF554-201ENST00000317243 SPINK7P58062 85 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms