RNA–Protein interactions for RNA: ENST00000307972.8

FOXP4-201, Transcript of forkhead box P4, humanhuman

TSL 1 (best) BASIC

Gene FOXP4, Length 3,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP4-201ENST00000307972 STAB1Q9NY15 2570 aa7.45□□□□□ -1.22
FOXP4-201ENST00000307972 LCE6AA0A183 80 aa7.45□□□□□ -1.22
FOXP4-201ENST00000307972 A0A096LNI7 61 aa7.44□□□□□ -1.22
FOXP4-201ENST00000307972 ZCCHC13Q8WW36 166 aaKnown RBP7.44□□□□□ -1.22
FOXP4-201ENST00000307972 SEC61GP60059 68 aa7.43□□□□□ -1.22
FOXP4-201ENST00000307972 CASC2Q6XLA1 102 aa7.42□□□□□ -1.22
FOXP4-201ENST00000307972 V9GYY9 64 aa7.42□□□□□ -1.22
FOXP4-201ENST00000307972 H0Y9P7 68 aa7.41□□□□□ -1.22
FOXP4-201ENST00000307972 Q1T7F1 81 aa7.4□□□□□ -1.22
FOXP4-201ENST00000307972 TRAV22A0A0B4J277 110 aa7.4□□□□□ -1.22
FOXP4-201ENST00000307972 B9D2Q9BPU9 175 aa7.4□□□□□ -1.22
FOXP4-201ENST00000307972 H0Y9J4 135 aa7.4□□□□□ -1.23
FOXP4-201ENST00000307972 CYP4F30PQ9H0H9 118 aa7.39□□□□□ -1.23
FOXP4-201ENST00000307972 COL6A5A8TX70 2615 aa7.38□□□□□ -1.23
FOXP4-201ENST00000307972 C16orf90A8MZG2 172 aa7.37□□□□□ -1.23
FOXP4-201ENST00000307972 UBE2DNLQ8IWF7 75 aa7.37□□□□□ -1.23
FOXP4-201ENST00000307972 A8MUN3 132 aa7.37□□□□□ -1.23
FOXP4-201ENST00000307972 PHF5AQ7RTV0 110 aaKnown RBP7.36□□□□□ -1.23
FOXP4-201ENST00000307972 NBEAL1Q6ZS30 2694 aa7.36□□□□□ -1.23
FOXP4-201ENST00000307972 CHTF8P0CG12 524 aa7.35□□□□□ -1.23
FOXP4-201ENST00000307972 PRR15Q8IV56 129 aa7.35□□□□□ -1.23
FOXP4-201ENST00000307972 KRTAP24-1Q3LI83 254 aa7.33□□□□□ -1.24
FOXP4-201ENST00000307972 FBN1P35555 2871 aaKnown RBP7.33□□□□□ -1.24
FOXP4-201ENST00000307972 IGLV8-61A0A075B6I0 122 aa7.32□□□□□ -1.24
FOXP4-201ENST00000307972 A8MWP4 228 aa7.32□□□□□ -1.24
FOXP4-201ENST00000307972 CHKB-CPT1BH3BT56 60 aa7.32□□□□□ -1.24
FOXP4-201ENST00000307972 CNBPP62633 177 aaKnown RBP7.31□□□□□ -1.24
FOXP4-201ENST00000307972 H3BPC8 53 aa7.31□□□□□ -1.24
FOXP4-201ENST00000307972 KRTAP29-1A8MX34 341 aaPredicted RBP7.3□□□□□ -1.24
FOXP4-201ENST00000307972 PRR15LQ9BU68 103 aa7.3□□□□□ -1.24
FOXP4-201ENST00000307972 PMAIP1Q13794 54 aa7.3□□□□□ -1.24
FOXP4-201ENST00000307972 SRRM2Q9UQ35 2752 aaKnown RBP7.29□□□□□ -1.24
FOXP4-201ENST00000307972 NDUFS5O43920 106 aa7.29□□□□□ -1.24
FOXP4-201ENST00000307972 C14orf177Q52M58 125 aa7.29□□□□□ -1.24
FOXP4-201ENST00000307972 PCOTHQ58A44 107 aa7.29□□□□□ -1.24
FOXP4-201ENST00000307972 IGLV9-49A0A0B4J1Y8 123 aa7.28□□□□□ -1.24
FOXP4-201ENST00000307972 SPANXA2-OT1Q8N9U9 137 aa7.28□□□□□ -1.24
FOXP4-201ENST00000307972 KRTAP1-5Q9BYS1 174 aa7.28□□□□□ -1.24
FOXP4-201ENST00000307972 LIMD2Q9BT23 127 aa7.27□□□□□ -1.25
FOXP4-201ENST00000307972 LINC00472Q9H8W2 130 aa7.27□□□□□ -1.25
FOXP4-201ENST00000307972 KRTAP11-1Q8IUC1 163 aa7.26□□□□□ -1.25
FOXP4-201ENST00000307972 SPTSSBQ8NFR3 76 aa7.26□□□□□ -1.25
FOXP4-201ENST00000307972 CDK2AP2O75956 126 aa7.24□□□□□ -1.25
FOXP4-201ENST00000307972 Q5VV11 94 aa7.24□□□□□ -1.25
FOXP4-201ENST00000307972 Q8N9P0 234 aaPredicted RBP7.24□□□□□ -1.25
FOXP4-201ENST00000307972 A6NED7 52 aa7.24□□□□□ -1.25
FOXP4-201ENST00000307972 MGAM2Q2M2H8 2515 aa7.23□□□□□ -1.25
FOXP4-201ENST00000307972 COA5Q86WW8 74 aa7.23□□□□□ -1.25
FOXP4-201ENST00000307972 SPRR1BP22528 89 aa7.23□□□□□ -1.25
FOXP4-201ENST00000307972 MMP24-AS1A0A0U1RRL7 71 aa7.22□□□□□ -1.25
FOXP4-201ENST00000307972 K7EIL1 84 aa7.22□□□□□ -1.25
FOXP4-201ENST00000307972 STAB2Q8WWQ8 2551 aa7.22□□□□□ -1.25
FOXP4-201ENST00000307972 A8MU10 97 aa7.21□□□□□ -1.25
FOXP4-201ENST00000307972 IGHV6-1A0A0B4J1U7 121 aa7.21□□□□□ -1.26
FOXP4-201ENST00000307972 ANK2Q01484 3957 aa7.21□□□□□ -1.26
FOXP4-201ENST00000307972 C9orf163Q8N9P6 203 aa7.2□□□□□ -1.26
FOXP4-201ENST00000307972 TP53AIP1Q9HCN2 124 aa7.18□□□□□ -1.26
FOXP4-201ENST00000307972 IGLV7-46A0A075B6I9 117 aa7.17□□□□□ -1.26
FOXP4-201ENST00000307972 SPAG11AQ6PDA7 123 aa7.17□□□□□ -1.26
FOXP4-201ENST00000307972 MOBPQ13875 183 aa7.16□□□□□ -1.26
FOXP4-201ENST00000307972 C8orf17Q9NRJ1 99 aa7.16□□□□□ -1.26
FOXP4-201ENST00000307972 PANO1I0J062 215 aa7.14□□□□□ -1.27
FOXP4-201ENST00000307972 TENM2Q9NT68 2774 aa7.14□□□□□ -1.27
FOXP4-201ENST00000307972 CD164Q04900 197 aa7.14□□□□□ -1.27
FOXP4-201ENST00000307972 SPINK6Q6UWN8 80 aa7.13□□□□□ -1.27
FOXP4-201ENST00000307972 APLNQ9ULZ1 77 aa7.12□□□□□ -1.27
FOXP4-201ENST00000307972 CSMD3Q7Z407 3707 aa7.11□□□□□ -1.27
FOXP4-201ENST00000307972 A0A1B0GVX0 72 aa7.11□□□□□ -1.27
FOXP4-201ENST00000307972 Q75L30 129 aa7.11□□□□□ -1.27
FOXP4-201ENST00000307972 LOC101927531A0A1B0GV80 90 aa7.11□□□□□ -1.27
FOXP4-201ENST00000307972 ZNF706Q9Y5V0 76 aaPredicted RBP7.11□□□□□ -1.27
FOXP4-201ENST00000307972 NBDYA0A0U1RRE5 68 aa7.1□□□□□ -1.27
FOXP4-201ENST00000307972 MRPL34Q9BQ48 92 aaKnown RBP7.1□□□□□ -1.27
FOXP4-201ENST00000307972 ANAPC11Q9NYG5 84 aa7.1□□□□□ -1.27
FOXP4-201ENST00000307972 DNHD1Q96M86 4753 aa7.09□□□□□ -1.27
FOXP4-201ENST00000307972 COL7A1Q02388 2944 aa7.09□□□□□ -1.27
FOXP4-201ENST00000307972 DNAH10Q8IVF4 4471 aa7.09□□□□□ -1.27
FOXP4-201ENST00000307972 Q96NJ1 140 aa7.09□□□□□ -1.27
FOXP4-201ENST00000307972 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.09□□□□□ -1.27
FOXP4-201ENST00000307972 ATP11AUNQ6ZP68 121 aa7.09□□□□□ -1.28
FOXP4-201ENST00000307972 LCA10Q71F78 164 aa7.09□□□□□ -1.28
FOXP4-201ENST00000307972 KRTAP13-1Q8IUC0 172 aa7.07□□□□□ -1.28
FOXP4-201ENST00000307972 MDFIQ99750 246 aa7.07□□□□□ -1.28
FOXP4-201ENST00000307972 Q6ZR54 194 aa7.06□□□□□ -1.28
FOXP4-201ENST00000307972 KTN1-AS1Q86SY8 53 aa7.05□□□□□ -1.28
FOXP4-201ENST00000307972 HRES1P13985 223 aa7.05□□□□□ -1.28
FOXP4-201ENST00000307972 CDC42SE1Q9NRR8 79 aa7.04□□□□□ -1.28
FOXP4-201ENST00000307972 LINC01558Q9Y6Z2 57 aa7.04□□□□□ -1.28
FOXP4-201ENST00000307972 SPACA4Q8TDM5 124 aa7.04□□□□□ -1.28
FOXP4-201ENST00000307972 PSORS1C2Q9UIG4 136 aa7.04□□□□□ -1.28
FOXP4-201ENST00000307972 A0A087X002 238 aa7.03□□□□□ -1.28
FOXP4-201ENST00000307972 NOTCH2NLQ7Z3S9 236 aa7.03□□□□□ -1.28
FOXP4-201ENST00000307972 DNAH1Q9P2D7 4330 aa7.03□□□□□ -1.28
FOXP4-201ENST00000307972 CIRBP-AS1Q8TBR5 109 aa7.02□□□□□ -1.29
FOXP4-201ENST00000307972 WWC2-AS2Q96NR7 200 aa7.02□□□□□ -1.29
FOXP4-201ENST00000307972 ASB16-AS1Q495Z4 193 aa7.02□□□□□ -1.29
FOXP4-201ENST00000307972 HUWE1Q7Z6Z7 4374 aaKnown RBP7.02□□□□□ -1.29
FOXP4-201ENST00000307972 PRR26Q8N8Z3 221 aa7.01□□□□□ -1.29
FOXP4-201ENST00000307972 LINC00483Q53H64 154 aa7.01□□□□□ -1.29
FOXP4-201ENST00000307972 NUPR2A6NF83 97 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms