RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 CD164Q04900 197 aa6.67□□□□□ -1.34
SYNPO2-201ENST00000307142 FAM229BQ4G0N7 80 aa6.67□□□□□ -1.34
SYNPO2-201ENST00000307142 KRTAP10-1P60331 282 aa6.66□□□□□ -1.34
SYNPO2-201ENST00000307142 KRTAP1-5Q9BYS1 174 aa6.66□□□□□ -1.34
SYNPO2-201ENST00000307142 KMT2BQ9UMN6 2715 aaPredicted RBP6.66□□□□□ -1.34
SYNPO2-201ENST00000307142 COL6A5A8TX70 2615 aa6.66□□□□□ -1.34
SYNPO2-201ENST00000307142 MAP1AP78559 2803 aaPredicted RBP6.65□□□□□ -1.34
SYNPO2-201ENST00000307142 Q8N1X5 172 aa6.65□□□□□ -1.34
SYNPO2-201ENST00000307142 BOD1L1Q8NFC6 3051 aa6.63□□□□□ -1.35
SYNPO2-201ENST00000307142 A0A1W2PNM2 257 aa6.63□□□□□ -1.35
SYNPO2-201ENST00000307142 COA5Q86WW8 74 aa6.63□□□□□ -1.35
SYNPO2-201ENST00000307142 IGLV5-48A0A075B6I7 105 aa6.63□□□□□ -1.35
SYNPO2-201ENST00000307142 DMXL2Q8TDJ6 3036 aa6.62□□□□□ -1.35
SYNPO2-201ENST00000307142 LINC01600Q96MT4 127 aa6.62□□□□□ -1.35
SYNPO2-201ENST00000307142 SPEGQ15772 3267 aa6.62□□□□□ -1.35
SYNPO2-201ENST00000307142 C1orf195Q5TG92 126 aa6.61□□□□□ -1.35
SYNPO2-201ENST00000307142 LRBAP50851 2863 aa6.61□□□□□ -1.35
SYNPO2-201ENST00000307142 GCN1Q92616 2671 aaKnown RBP6.6□□□□□ -1.35
SYNPO2-201ENST00000307142 UNC79Q9P2D8 2635 aa6.58□□□□□ -1.36
SYNPO2-201ENST00000307142 CRYBG3Q68DQ2 2970 aa6.58□□□□□ -1.36
SYNPO2-201ENST00000307142 STAB1Q9NY15 2570 aa6.57□□□□□ -1.36
SYNPO2-201ENST00000307142 KRTAP21-3Q3LHN1 58 aa6.57□□□□□ -1.36
SYNPO2-201ENST00000307142 SEC61BP60468 96 aaKnown RBP6.56□□□□□ -1.36
SYNPO2-201ENST00000307142 FREM2Q5SZK8 3169 aa6.55□□□□□ -1.36
SYNPO2-201ENST00000307142 A0A0D9SG42 100 aa6.55□□□□□ -1.36
SYNPO2-201ENST00000307142 FAM104AQ969W3 186 aa6.54□□□□□ -1.36
SYNPO2-201ENST00000307142 DMXL1Q9Y485 3027 aa6.54□□□□□ -1.36
SYNPO2-201ENST00000307142 UTP20O75691 2785 aaKnown RBP6.54□□□□□ -1.36
SYNPO2-201ENST00000307142 REV3LO60673 3130 aa6.54□□□□□ -1.36
SYNPO2-201ENST00000307142 CFAP47Q6ZTR5 3102 aa6.53□□□□□ -1.36
SYNPO2-201ENST00000307142 SPINT4Q6UDR6 99 aa6.52□□□□□ -1.37
SYNPO2-201ENST00000307142 COL12A1Q99715 3063 aa6.52□□□□□ -1.37
SYNPO2-201ENST00000307142 MYO15AQ9UKN7 3530 aa6.51□□□□□ -1.37
SYNPO2-201ENST00000307142 UQCR11O14957 56 aa6.51□□□□□ -1.37
SYNPO2-201ENST00000307142 OXTP01178 125 aa6.5□□□□□ -1.37
SYNPO2-201ENST00000307142 ATMQ13315 3056 aa6.5□□□□□ -1.37
SYNPO2-201ENST00000307142 Q6ZR54 194 aa6.5□□□□□ -1.37
SYNPO2-201ENST00000307142 C4orf26Q17RF5 130 aa6.5□□□□□ -1.37
SYNPO2-201ENST00000307142 KALRNO60229 2985 aa6.49□□□□□ -1.37
SYNPO2-201ENST00000307142 Q8NDZ9 215 aa6.47□□□□□ -1.37
SYNPO2-201ENST00000307142 ZCCHC13Q8WW36 166 aaKnown RBP6.47□□□□□ -1.37
SYNPO2-201ENST00000307142 NBEAL1Q6ZS30 2694 aa6.47□□□□□ -1.37
SYNPO2-201ENST00000307142 KRTAP26-1Q6PEX3 210 aa6.47□□□□□ -1.37
SYNPO2-201ENST00000307142 S4R3F8 94 aa6.47□□□□□ -1.37
SYNPO2-201ENST00000307142 MIR22HGQ0VDD5 57 aa6.47□□□□□ -1.37
SYNPO2-201ENST00000307142 NOTCH1P46531 2555 aa6.46□□□□□ -1.37
SYNPO2-201ENST00000307142 SPRR1AP35321 89 aa6.46□□□□□ -1.38
SYNPO2-201ENST00000307142 CRIPTQ9P021 101 aa6.45□□□□□ -1.38
SYNPO2-201ENST00000307142 ADGRG4Q8IZF6 3080 aa6.44□□□□□ -1.38
SYNPO2-201ENST00000307142 NBEAQ8NFP9 2946 aa6.43□□□□□ -1.38
SYNPO2-201ENST00000307142 PANO1I0J062 215 aa6.43□□□□□ -1.38
SYNPO2-201ENST00000307142 NBEAL2Q6ZNJ1 2754 aa6.43□□□□□ -1.38
SYNPO2-201ENST00000307142 CAMK2N1Q7Z7J9 78 aa6.42□□□□□ -1.38
SYNPO2-201ENST00000307142 A8MUN3 132 aa6.42□□□□□ -1.38
SYNPO2-201ENST00000307142 CSAG1Q6PB30 78 aa6.41□□□□□ -1.38
SYNPO2-201ENST00000307142 UBR5O95071 2799 aaPredicted RBP6.41□□□□□ -1.38
SYNPO2-201ENST00000307142 ITPR1Q14643 2758 aa6.41□□□□□ -1.38
SYNPO2-201ENST00000307142 ASPMQ8IZT6 3477 aa6.39□□□□□ -1.39
SYNPO2-201ENST00000307142 TACC2O95359 2948 aa6.39□□□□□ -1.39
SYNPO2-201ENST00000307142 FLNCQ14315 2725 aa6.38□□□□□ -1.39
SYNPO2-201ENST00000307142 SPINK7P58062 85 aa6.38□□□□□ -1.39
SYNPO2-201ENST00000307142 KLKP1Q107X0 134 aa6.38□□□□□ -1.39
SYNPO2-201ENST00000307142 FP248Q71RG6 208 aaPredicted RBP6.38□□□□□ -1.39
SYNPO2-201ENST00000307142 HRES1P13985 223 aa6.38□□□□□ -1.39
SYNPO2-201ENST00000307142 RPS28P62857 69 aaKnown RBP6.37□□□□□ -1.39
SYNPO2-201ENST00000307142 CYP4F30PQ9H0H9 118 aa6.37□□□□□ -1.39
SYNPO2-201ENST00000307142 SPANXA2-OT1Q8N9U9 137 aa6.36□□□□□ -1.39
SYNPO2-201ENST00000307142 SPRR1BP22528 89 aa6.36□□□□□ -1.39
SYNPO2-201ENST00000307142 NBPF19A0A087WUL8 3843 aa6.36□□□□□ -1.39
SYNPO2-201ENST00000307142 LOC400499M0QZD8 3231 aa6.36□□□□□ -1.39
SYNPO2-201ENST00000307142 HIVEP1P15822 2718 aa6.35□□□□□ -1.39
SYNPO2-201ENST00000307142 LINC00483Q53H64 154 aa6.35□□□□□ -1.39
SYNPO2-201ENST00000307142 MMP24-AS1A0A0U1RRL7 71 aa6.35□□□□□ -1.39
SYNPO2-201ENST00000307142 A0A087X002 238 aa6.34□□□□□ -1.39
SYNPO2-201ENST00000307142 WDFY3Q8IZQ1 3526 aa6.33□□□□□ -1.4
SYNPO2-201ENST00000307142 ZZEF1O43149 2961 aa6.33□□□□□ -1.4
SYNPO2-201ENST00000307142 APCP25054 2843 aa6.32□□□□□ -1.4
SYNPO2-201ENST00000307142 NSD1Q96L73 2696 aaPredicted RBP6.32□□□□□ -1.4
SYNPO2-201ENST00000307142 CDC42SE1Q9NRR8 79 aa6.32□□□□□ -1.4
SYNPO2-201ENST00000307142 FLG2Q5D862 2391 aaPredicted RBP6.32□□□□□ -1.4
SYNPO2-201ENST00000307142 Q5W150 140 aa6.31□□□□□ -1.4
SYNPO2-201ENST00000307142 Q6ZRN7 208 aaPredicted RBP6.31□□□□□ -1.4
SYNPO2-201ENST00000307142 H7BZZ5 65 aa6.31□□□□□ -1.4
SYNPO2-201ENST00000307142 LINC00472Q9H8W2 130 aa6.31□□□□□ -1.4
SYNPO2-201ENST00000307142 Q8N9P0 234 aaPredicted RBP6.31□□□□□ -1.4
SYNPO2-201ENST00000307142 OCR1Q9BZK8 76 aa6.3□□□□□ -1.4
SYNPO2-201ENST00000307142 PRO0628Q9UI54 55 aa6.3□□□□□ -1.4
SYNPO2-201ENST00000307142 R4GN34 69 aa6.28□□□□□ -1.4
SYNPO2-201ENST00000307142 A0A1B0GU33 70 aa6.27□□□□□ -1.41
SYNPO2-201ENST00000307142 ASH1LQ9NR48 2969 aaKnown RBP6.26□□□□□ -1.41
SYNPO2-201ENST00000307142 STAB2Q8WWQ8 2551 aa6.24□□□□□ -1.41
SYNPO2-201ENST00000307142 TENM4Q6N022 2769 aa6.22□□□□□ -1.41
SYNPO2-201ENST00000307142 LAMA5O15230 3695 aa6.22□□□□□ -1.41
SYNPO2-201ENST00000307142 DMDP11532 3685 aa6.21□□□□□ -1.41
SYNPO2-201ENST00000307142 KRTAP11-1Q8IUC1 163 aa6.21□□□□□ -1.41
SYNPO2-201ENST00000307142 KRTAP4-16G5E9R7 235 aaPredicted RBP6.21□□□□□ -1.42
SYNPO2-201ENST00000307142 LCA10Q71F78 164 aa6.18□□□□□ -1.42
SYNPO2-201ENST00000307142 RELNP78509 3460 aa6.17□□□□□ -1.42
SYNPO2-201ENST00000307142 PLAC4Q8WY50 150 aa6.17□□□□□ -1.42
SYNPO2-201ENST00000307142 DMAC1Q96GE9 116 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 157.1 ms