RNA–Protein interactions for RNA: ENST00000306378.10

BPTF-201, Transcript of bromodomain PHD finger transcription factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BPTF, Length 9,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-201ENST00000306378 C9orf92A6NGG3 77 aa12.23□□□□□ -0.45
BPTF-201ENST00000306378 MMP24-AS1A0A0U1RRL7 71 aa12.2□□□□□ -0.46
BPTF-201ENST00000306378 RPL37P61927 97 aaKnown RBP12.2□□□□□ -0.46
BPTF-201ENST00000306378 PSORS1C2Q9UIG4 136 aa12.19□□□□□ -0.46
BPTF-201ENST00000306378 ZNF575Q86XF7 245 aa12.14□□□□□ -0.47
BPTF-201ENST00000306378 KRTAP10-9P60411 292 aa12.14□□□□□ -0.47
BPTF-201ENST00000306378 S4R3F8 94 aa12.13□□□□□ -0.47
BPTF-201ENST00000306378 ZCCHC13Q8WW36 166 aaKnown RBP12.13□□□□□ -0.47
BPTF-201ENST00000306378 A0A096LNT2 108 aa12.12□□□□□ -0.47
BPTF-201ENST00000306378 A0A087WTM6 91 aa12.11□□□□□ -0.47
BPTF-201ENST00000306378 OXTP01178 125 aa12.1□□□□□ -0.47
BPTF-201ENST00000306378 A0A0G2JQZ4 141 aa12.09□□□□□ -0.47
BPTF-201ENST00000306378 A0A1W2PNN7 141 aa12.09□□□□□ -0.47
BPTF-201ENST00000306378 LRBAP50851 2863 aa12.09□□□□□ -0.47
BPTF-201ENST00000306378 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.08□□□□□ -0.47
BPTF-201ENST00000306378 Q6ZR54 194 aa12.08□□□□□ -0.48
BPTF-201ENST00000306378 SEC61BP60468 96 aaKnown RBP12.07□□□□□ -0.48
BPTF-201ENST00000306378 LINC00472Q9H8W2 130 aa12.06□□□□□ -0.48
BPTF-201ENST00000306378 Q5W150 140 aa12.06□□□□□ -0.48
BPTF-201ENST00000306378 SPATA8Q6RVD6 105 aa12.05□□□□□ -0.48
BPTF-201ENST00000306378 A6NN06 94 aa12.04□□□□□ -0.48
BPTF-201ENST00000306378 J3QL48 77 aa12.01□□□□□ -0.49
BPTF-201ENST00000306378 H1FX-AS1Q4G0G2 97 aa12.01□□□□□ -0.49
BPTF-201ENST00000306378 CEP350Q5VT06 3117 aa12□□□□□ -0.49
BPTF-201ENST00000306378 SPRR1AP35321 89 aa11.99□□□□□ -0.49
BPTF-201ENST00000306378 WWC2-AS2Q96NR7 200 aa11.98□□□□□ -0.49
BPTF-201ENST00000306378 SPRR1BP22528 89 aa11.96□□□□□ -0.49
BPTF-201ENST00000306378 Q6ZSA8 131 aa11.96□□□□□ -0.49
BPTF-201ENST00000306378 R4GN34 69 aa11.95□□□□□ -0.5
BPTF-201ENST00000306378 KRTAP25-1Q3LHN0 102 aa11.94□□□□□ -0.5
BPTF-201ENST00000306378 A0A0C4DFX4 3053 aa11.89□□□□□ -0.51
BPTF-201ENST00000306378 ANAPC11Q9NYG5 84 aa11.89□□□□□ -0.51
BPTF-201ENST00000306378 TRANK1O15050 2925 aa11.88□□□□□ -0.51
BPTF-201ENST00000306378 EP400Q96L91 3159 aa11.86□□□□□ -0.51
BPTF-201ENST00000306378 DSPP15924 2871 aaKnown RBP11.84□□□□□ -0.51
BPTF-201ENST00000306378 CHD9Q3L8U1 2897 aa11.84□□□□□ -0.51
BPTF-201ENST00000306378 DNAH12Q6ZR08 3092 aa11.82□□□□□ -0.52
BPTF-201ENST00000306378 CFAP54Q96N23 3096 aa11.78□□□□□ -0.52
BPTF-201ENST00000306378 LCE6AA0A183 80 aa11.75□□□□□ -0.53
BPTF-201ENST00000306378 KRTAP10-11P60412 298 aa11.74□□□□□ -0.53
BPTF-201ENST00000306378 PCNTO95613 3336 aa11.71□□□□□ -0.54
BPTF-201ENST00000306378 K7EIL1 84 aa11.71□□□□□ -0.54
BPTF-201ENST00000306378 PLAC8Q9NZF1 115 aa11.7□□□□□ -0.54
BPTF-201ENST00000306378 PANO1I0J062 215 aa11.7□□□□□ -0.54
BPTF-201ENST00000306378 KRTAP24-1Q3LI83 254 aa11.68□□□□□ -0.54
BPTF-201ENST00000306378 FLNCQ14315 2725 aa11.67□□□□□ -0.54
BPTF-201ENST00000306378 NDUFAF8A1L188 74 aa11.67□□□□□ -0.54
BPTF-201ENST00000306378 NIPBLQ6KC79 2804 aaeCLIP11.66□□□□□ -0.549e-7■■■■□ 21.7
BPTF-201ENST00000306378 KRTAP26-1Q6PEX3 210 aa11.66□□□□□ -0.54
BPTF-201ENST00000306378 KRTAP29-1A8MX34 341 aaPredicted RBP11.65□□□□□ -0.54
BPTF-201ENST00000306378 KALRNO60229 2985 aa11.65□□□□□ -0.54
BPTF-201ENST00000306378 TENM3Q9P273 2699 aa11.63□□□□□ -0.55
BPTF-201ENST00000306378 M0QZ58 72 aa11.63□□□□□ -0.55
BPTF-201ENST00000306378 CASC10Q5T4H9 136 aa11.62□□□□□ -0.55
BPTF-201ENST00000306378 PLAC4Q8WY50 150 aa11.61□□□□□ -0.55
BPTF-201ENST00000306378 FRYLO94915 3013 aa11.61□□□□□ -0.55
BPTF-201ENST00000306378 SRCAPQ6ZRS2 3230 aa11.59□□□□□ -0.55
BPTF-201ENST00000306378 NF1P21359 2839 aa11.59□□□□□ -0.55
BPTF-201ENST00000306378 HIVEP1P15822 2718 aa11.57□□□□□ -0.56
BPTF-201ENST00000306378 Q8NDZ9 215 aa11.52□□□□□ -0.57
BPTF-201ENST00000306378 M0R2T5 61 aa11.46□□□□□ -0.57
BPTF-201ENST00000306378 TENM1Q9UKZ4 2725 aa11.46□□□□□ -0.58
BPTF-201ENST00000306378 CHD7Q9P2D1 2997 aa11.44□□□□□ -0.58
BPTF-201ENST00000306378 KRTAP4-16G5E9R7 235 aaPredicted RBP11.44□□□□□ -0.58
BPTF-201ENST00000306378 PP632Q6XCG6 107 aa11.43□□□□□ -0.58
BPTF-201ENST00000306378 FRYQ5TBA9 3013 aa11.43□□□□□ -0.58
BPTF-201ENST00000306378 TGP01266 2768 aa11.43□□□□□ -0.58
BPTF-201ENST00000306378 ADM2Q7Z4H4 148 aa11.42□□□□□ -0.58
BPTF-201ENST00000306378 RPS29P62273 56 aaKnown RBP11.42□□□□□ -0.58
BPTF-201ENST00000306378 SMR3BP02814 79 aaPredicted RBP11.41□□□□□ -0.58
BPTF-201ENST00000306378 PDZD2O15018 2839 aa11.41□□□□□ -0.58
BPTF-201ENST00000306378 MGAQ8IWI9 3026 aa11.41□□□□□ -0.58
BPTF-201ENST00000306378 ASH1LQ9NR48 2969 aaKnown RBP11.37□□□□□ -0.59
BPTF-201ENST00000306378 LAMA2P24043 3122 aaKnown RBP11.36□□□□□ -0.59
BPTF-201ENST00000306378 C20orf166-AS1Q96NR2 134 aa11.35□□□□□ -0.59
BPTF-201ENST00000306378 NOTCH2NLQ7Z3S9 236 aa11.33□□□□□ -0.6
BPTF-201ENST00000306378 A8MUU9 505 aa11.32□□□□□ -0.6
BPTF-201ENST00000306378 TACC2O95359 2948 aa11.31□□□□□ -0.6
BPTF-201ENST00000306378 CELSR2Q9HCU4 2923 aa11.29□□□□□ -0.6
BPTF-201ENST00000306378 SRRM2Q9UQ35 2752 aaKnown RBP11.28□□□□□ -0.6
BPTF-201ENST00000306378 KRTAP10-3P60369 221 aa11.27□□□□□ -0.61
BPTF-201ENST00000306378 C5orf42Q9H799 3197 aa11.27□□□□□ -0.61
BPTF-201ENST00000306378 KRTAP11-1Q8IUC1 163 aa11.26□□□□□ -0.61
BPTF-201ENST00000306378 NBEAQ8NFP9 2946 aa11.16□□□□□ -0.62
BPTF-201ENST00000306378 TRIOO75962 3097 aa11.13□□□□□ -0.63
BPTF-201ENST00000306378 TNP1P09430 55 aa11.11□□□□□ -0.63
BPTF-201ENST00000306378 VPS13AQ96RL7 3174 aa11.09□□□□□ -0.63
BPTF-201ENST00000306378 CRYBG3Q68DQ2 2970 aa11.07□□□□□ -0.64
BPTF-201ENST00000306378 C10orf95Q9H7T3 257 aa11.03□□□□□ -0.64
BPTF-201ENST00000306378 A8MU10 97 aa11.02□□□□□ -0.65
BPTF-201ENST00000306378 KRTAP1-3Q8IUG1 177 aa10.99□□□□□ -0.65
BPTF-201ENST00000306378 TNRC18O15417 2968 aaPredicted RBP10.98□□□□□ -0.65
BPTF-201ENST00000306378 KRTAP1-1Q07627 177 aa10.98□□□□□ -0.65
BPTF-201ENST00000306378 ZANQ9Y493 2812 aa10.94□□□□□ -0.66
BPTF-201ENST00000306378 COL12A1Q99715 3063 aa10.93□□□□□ -0.66
BPTF-201ENST00000306378 ZZEF1O43149 2961 aa10.92□□□□□ -0.66
BPTF-201ENST00000306378 P0C880 135 aa10.9□□□□□ -0.66
BPTF-201ENST00000306378 UTRNP46939 3433 aa10.89□□□□□ -0.67
BPTF-201ENST00000306378 KRTAP1-5Q9BYS1 174 aa10.89□□□□□ -0.67
BPTF-201ENST00000306378 PRUNE2Q8WUY3 3088 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms