RNA–Protein interactions for RNA: ENST00000306320.9

RETREG1-201, Transcript of reticulophagy regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG1, Length 3,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-201ENST00000306320 Q6ZRX8 168 aa11.51□□□□□ -0.57
RETREG1-201ENST00000306320 B9D2Q9BPU9 175 aa11.5□□□□□ -0.57
RETREG1-201ENST00000306320 PCOTHQ58A44 107 aa11.5□□□□□ -0.57
RETREG1-201ENST00000306320 LINC00476Q8WZB0 136 aa11.5□□□□□ -0.57
RETREG1-201ENST00000306320 Q1T7F1 81 aa11.49□□□□□ -0.57
RETREG1-201ENST00000306320 IGLV5-48A0A075B6I7 105 aa11.48□□□□□ -0.57
RETREG1-201ENST00000306320 DHRS4-AS1Q9P1J3 65 aa11.48□□□□□ -0.57
RETREG1-201ENST00000306320 COL7A1Q02388 2944 aa11.48□□□□□ -0.57
RETREG1-201ENST00000306320 KCNQ1DNQ9H478 68 aa11.47□□□□□ -0.57
RETREG1-201ENST00000306320 H0Y9P7 68 aa11.47□□□□□ -0.57
RETREG1-201ENST00000306320 KRTAP26-1Q6PEX3 210 aa11.47□□□□□ -0.57
RETREG1-201ENST00000306320 H0Y9J4 135 aa11.46□□□□□ -0.58
RETREG1-201ENST00000306320 LINC00588Q9Y4M8 146 aa11.45□□□□□ -0.58
RETREG1-201ENST00000306320 MRPL55Q7Z7F7 128 aaKnown RBP11.45□□□□□ -0.58
RETREG1-201ENST00000306320 DNAH10Q8IVF4 4471 aa11.45□□□□□ -0.58
RETREG1-201ENST00000306320 Q5VV11 94 aa11.42□□□□□ -0.58
RETREG1-201ENST00000306320 CASC2Q6XLA1 102 aa11.4□□□□□ -0.58
RETREG1-201ENST00000306320 NDUFB1O75438 58 aa11.4□□□□□ -0.58
RETREG1-201ENST00000306320 ZCCHC13Q8WW36 166 aaKnown RBP11.4□□□□□ -0.58
RETREG1-201ENST00000306320 K7EIL1 84 aa11.4□□□□□ -0.59
RETREG1-201ENST00000306320 IGFL1Q6UW32 110 aa11.4□□□□□ -0.59
RETREG1-201ENST00000306320 UBE2AP49459 152 aa11.38□□□□□ -0.59
RETREG1-201ENST00000306320 SPAG11AQ6PDA7 123 aa11.38□□□□□ -0.59
RETREG1-201ENST00000306320 NDUFS5O43920 106 aa11.38□□□□□ -0.59
RETREG1-201ENST00000306320 LINC01556Q5JQF7 62 aa11.38□□□□□ -0.59
RETREG1-201ENST00000306320 HUWE1Q7Z6Z7 4374 aaKnown RBP11.38□□□□□ -0.59
RETREG1-201ENST00000306320 IGLV1-50A0A075B6I6 118 aa11.37□□□□□ -0.59
RETREG1-201ENST00000306320 C16orf90A8MZG2 172 aa11.37□□□□□ -0.59
RETREG1-201ENST00000306320 REG3GQ6UW15 175 aa11.34□□□□□ -0.59
RETREG1-201ENST00000306320 Q8N9P0 234 aaPredicted RBP11.32□□□□□ -0.6
RETREG1-201ENST00000306320 TNP2Q05952 138 aa11.31□□□□□ -0.6
RETREG1-201ENST00000306320 SPRR4Q96PI1 79 aa11.31□□□□□ -0.6
RETREG1-201ENST00000306320 CYP4F30PQ9H0H9 118 aa11.31□□□□□ -0.6
RETREG1-201ENST00000306320 H3BNG1 76 aa11.3□□□□□ -0.6
RETREG1-201ENST00000306320 LCE6AA0A183 80 aa11.28□□□□□ -0.6
RETREG1-201ENST00000306320 COA5Q86WW8 74 aa11.28□□□□□ -0.6
RETREG1-201ENST00000306320 KRTAP7-1Q8IUC3 87 aa11.27□□□□□ -0.6
RETREG1-201ENST00000306320 UBE2DNLQ8IWF7 75 aa11.27□□□□□ -0.6
RETREG1-201ENST00000306320 KRTAP1-5Q9BYS1 174 aa11.27□□□□□ -0.6
RETREG1-201ENST00000306320 DNAH10OSP0CZ25 163 aa11.27□□□□□ -0.61
RETREG1-201ENST00000306320 CD164Q04900 197 aa11.27□□□□□ -0.61
RETREG1-201ENST00000306320 RBM12B-AS1Q9P1G2 102 aa11.27□□□□□ -0.61
RETREG1-201ENST00000306320 LCA10Q71F78 164 aa11.26□□□□□ -0.61
RETREG1-201ENST00000306320 CHTF8P0CG12 524 aa11.25□□□□□ -0.61
RETREG1-201ENST00000306320 LIMD2Q9BT23 127 aa11.25□□□□□ -0.61
RETREG1-201ENST00000306320 KRTAP4-16G5E9R7 235 aaPredicted RBP11.24□□□□□ -0.61
RETREG1-201ENST00000306320 MDFIQ99750 246 aa11.23□□□□□ -0.61
RETREG1-201ENST00000306320 DNAH9Q9NYC9 4486 aa11.22□□□□□ -0.61
RETREG1-201ENST00000306320 KTN1-AS1Q86SY8 53 aa11.22□□□□□ -0.61
RETREG1-201ENST00000306320 DNAH7Q8WXX0 4024 aa11.21□□□□□ -0.61
RETREG1-201ENST00000306320 IGLV9-49A0A0B4J1Y8 123 aa11.2□□□□□ -0.62
RETREG1-201ENST00000306320 CNBPP62633 177 aaKnown RBP11.2□□□□□ -0.62
RETREG1-201ENST00000306320 DNAH3Q8TD57 4116 aa11.18□□□□□ -0.62
RETREG1-201ENST00000306320 A0A1B0GW54 56 aa11.17□□□□□ -0.62
RETREG1-201ENST00000306320 PHF5AQ7RTV0 110 aaKnown RBP11.17□□□□□ -0.62
RETREG1-201ENST00000306320 SPRR1AP35321 89 aa11.17□□□□□ -0.62
RETREG1-201ENST00000306320 TGP01266 2768 aa11.15□□□□□ -0.62
RETREG1-201ENST00000306320 IGHV6-1A0A0B4J1U7 121 aa11.14□□□□□ -0.63
RETREG1-201ENST00000306320 SPINK7P58062 85 aa11.11□□□□□ -0.63
RETREG1-201ENST00000306320 A8MWP4 228 aa11.11□□□□□ -0.63
RETREG1-201ENST00000306320 LOC101927531A0A1B0GV80 90 aa11.1□□□□□ -0.63
RETREG1-201ENST00000306320 PLECQ15149 4684 aaKnown RBP11.1□□□□□ -0.63
RETREG1-201ENST00000306320 KRTAP29-1A8MX34 341 aaPredicted RBP11.1□□□□□ -0.63
RETREG1-201ENST00000306320 ATP11AUNQ6ZP68 121 aa11.1□□□□□ -0.63
RETREG1-201ENST00000306320 SPINK6Q6UWN8 80 aa11.08□□□□□ -0.64
RETREG1-201ENST00000306320 PRAC1Q96KF2 57 aa11.08□□□□□ -0.64
RETREG1-201ENST00000306320 KRTAP11-1Q8IUC1 163 aa11.08□□□□□ -0.64
RETREG1-201ENST00000306320 PRR26Q8N8Z3 221 aa11.06□□□□□ -0.64
RETREG1-201ENST00000306320 TLX1NBP0CAT3 122 aa11.06□□□□□ -0.64
RETREG1-201ENST00000306320 SPANXA2-OT1Q8N9U9 137 aa11.06□□□□□ -0.64
RETREG1-201ENST00000306320 DNAH1Q9P2D7 4330 aa11.05□□□□□ -0.64
RETREG1-201ENST00000306320 MOBPQ13875 183 aa11.04□□□□□ -0.64
RETREG1-201ENST00000306320 Q75L30 129 aa11.04□□□□□ -0.64
RETREG1-201ENST00000306320 CDK2AP2O75956 126 aa11.04□□□□□ -0.64
RETREG1-201ENST00000306320 RETNLBQ9BQ08 111 aa11.04□□□□□ -0.64
RETREG1-201ENST00000306320 PLA2G2DQ9UNK4 145 aa11.03□□□□□ -0.64
RETREG1-201ENST00000306320 C9orf163Q8N9P6 203 aa11.03□□□□□ -0.64
RETREG1-201ENST00000306320 PANO1I0J062 215 aa11.01□□□□□ -0.65
RETREG1-201ENST00000306320 CDC42SE1Q9NRR8 79 aa11.01□□□□□ -0.65
RETREG1-201ENST00000306320 ANAPC11Q9NYG5 84 aa11.01□□□□□ -0.65
RETREG1-201ENST00000306320 MMP24-AS1A0A0U1RRL7 71 aa11.01□□□□□ -0.65
RETREG1-201ENST00000306320 IGLV5-37A0A075B6J1 123 aa10.99□□□□□ -0.65
RETREG1-201ENST00000306320 LINC00472Q9H8W2 130 aa10.99□□□□□ -0.65
RETREG1-201ENST00000306320 IGLV7-46A0A075B6I9 117 aa10.98□□□□□ -0.65
RETREG1-201ENST00000306320 APLNQ9ULZ1 77 aa10.98□□□□□ -0.65
RETREG1-201ENST00000306320 A6NN06 94 aa10.98□□□□□ -0.65
RETREG1-201ENST00000306320 H3BPC8 53 aa10.97□□□□□ -0.65
RETREG1-201ENST00000306320 C7orf65Q6ZTY9 151 aa10.97□□□□□ -0.65
RETREG1-201ENST00000306320 ADM2Q7Z4H4 148 aa10.96□□□□□ -0.66
RETREG1-201ENST00000306320 PRKDCP78527 4128 aaKnown RBP10.95□□□□□ -0.66
RETREG1-201ENST00000306320 STARD9Q9P2P6 4700 aa10.95□□□□□ -0.66
RETREG1-201ENST00000306320 HRES1P13985 223 aa10.94□□□□□ -0.66
RETREG1-201ENST00000306320 DNHD1Q96M86 4753 aa10.93□□□□□ -0.66
RETREG1-201ENST00000306320 MEGF8Q7Z7M0 2845 aa10.91□□□□□ -0.66
RETREG1-201ENST00000306320 KMT2AQ03164 3969 aa10.9□□□□□ -0.66
RETREG1-201ENST00000306320 A0A087X002 238 aa10.89□□□□□ -0.67
RETREG1-201ENST00000306320 NOTCH2NLQ7Z3S9 236 aa10.89□□□□□ -0.67
RETREG1-201ENST00000306320 C8orf17Q9NRJ1 99 aa10.89□□□□□ -0.67
RETREG1-201ENST00000306320 LINC00313P59037 77 aa10.88□□□□□ -0.67
RETREG1-201ENST00000306320 NBDYA0A0U1RRE5 68 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms