RNA–Protein interactions for RNA: ENST00000303545.3

RNF139-201, Transcript of ring finger protein 139, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF139, Length 2,637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139-201ENST00000303545 VPS13DQ5THJ4 4388 aa11.65□□□□□ -0.54
RNF139-201ENST00000303545 F8WEM9 126 aa11.65□□□□□ -0.54
RNF139-201ENST00000303545 Q6ZRN7 208 aaPredicted RBP11.65□□□□□ -0.54
RNF139-201ENST00000303545 DNHD1Q96M86 4753 aa11.65□□□□□ -0.54
RNF139-201ENST00000303545 EPM2AB3EWF7 344 aa11.65□□□□□ -0.54
RNF139-201ENST00000303545 DEFB116Q30KQ4 102 aa11.63□□□□□ -0.55
RNF139-201ENST00000303545 IGFL1Q6UW32 110 aa11.63□□□□□ -0.55
RNF139-201ENST00000303545 HRCT1Q6UXD1 115 aa11.63□□□□□ -0.55
RNF139-201ENST00000303545 HECTD4Q9Y4D8 3996 aa11.61□□□□□ -0.55
RNF139-201ENST00000303545 TGP01266 2768 aa11.61□□□□□ -0.55
RNF139-201ENST00000303545 UBE2AP49459 152 aa11.6□□□□□ -0.55
RNF139-201ENST00000303545 SPRR4Q96PI1 79 aa11.6□□□□□ -0.55
RNF139-201ENST00000303545 FAM236DA0A1B0GTK5 79 aa11.59□□□□□ -0.55
RNF139-201ENST00000303545 FAM236CP0DP71 79 aa11.59□□□□□ -0.55
RNF139-201ENST00000303545 DNAH2Q9P225 4427 aa11.59□□□□□ -0.55
RNF139-201ENST00000303545 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.59□□□□□ -0.55
RNF139-201ENST00000303545 H7BZZ5 65 aa11.58□□□□□ -0.55
RNF139-201ENST00000303545 BCE1O60756 84 aa11.57□□□□□ -0.56
RNF139-201ENST00000303545 K7EQZ3 153 aa11.55□□□□□ -0.56
RNF139-201ENST00000303545 DSCR10P59022 87 aa11.55□□□□□ -0.56
RNF139-201ENST00000303545 A0A087WSZ3 146 aa11.55□□□□□ -0.56
RNF139-201ENST00000303545 FAM30AQ9NZY2 134 aa11.53□□□□□ -0.56
RNF139-201ENST00000303545 KLKP1Q107X0 134 aa11.52□□□□□ -0.57
RNF139-201ENST00000303545 A0A087WTM6 91 aa11.51□□□□□ -0.57
RNF139-201ENST00000303545 SERP1Q9Y6X1 66 aa11.51□□□□□ -0.57
RNF139-201ENST00000303545 FBN3Q75N90 2809 aa11.51□□□□□ -0.57
RNF139-201ENST00000303545 A0A1B0GW54 56 aa11.51□□□□□ -0.57
RNF139-201ENST00000303545 FRAS1Q86XX4 4008 aa11.5□□□□□ -0.57
RNF139-201ENST00000303545 OCR1Q9BZK8 76 aa11.49□□□□□ -0.57
RNF139-201ENST00000303545 LINC00474Q9P2X8 69 aa11.49□□□□□ -0.57
RNF139-201ENST00000303545 RPL37AP61513 92 aaKnown RBP11.49□□□□□ -0.57
RNF139-201ENST00000303545 SPACA4Q8TDM5 124 aa11.48□□□□□ -0.57
RNF139-201ENST00000303545 TMEM254Q8TBM7 123 aa11.47□□□□□ -0.57
RNF139-201ENST00000303545 IGLV8-61A0A075B6I0 122 aa11.46□□□□□ -0.58
RNF139-201ENST00000303545 RTL8CO15255 209 aa11.45□□□□□ -0.58
RNF139-201ENST00000303545 H0Y9J4 135 aa11.45□□□□□ -0.58
RNF139-201ENST00000303545 IGLV9-49A0A0B4J1Y8 123 aa11.42□□□□□ -0.58
RNF139-201ENST00000303545 DNAH17Q9UFH2 4485 aa11.42□□□□□ -0.58
RNF139-201ENST00000303545 DNAH8Q96JB1 4490 aa11.42□□□□□ -0.58
RNF139-201ENST00000303545 KRTAP13-1Q8IUC0 172 aa11.42□□□□□ -0.58
RNF139-201ENST00000303545 PKIGQ9Y2B9 76 aa11.41□□□□□ -0.58
RNF139-201ENST00000303545 SPRR1BP22528 89 aa11.41□□□□□ -0.58
RNF139-201ENST00000303545 WFDC13Q8IUB5 93 aa11.41□□□□□ -0.58
RNF139-201ENST00000303545 Q6ZR54 194 aa11.39□□□□□ -0.59
RNF139-201ENST00000303545 LY6G6CO95867 125 aa11.39□□□□□ -0.59
RNF139-201ENST00000303545 LINC00336Q6ZUF6 198 aa11.39□□□□□ -0.59
RNF139-201ENST00000303545 FP248Q71RG6 208 aaPredicted RBP11.39□□□□□ -0.59
RNF139-201ENST00000303545 ANAPC11Q9NYG5 84 aa11.39□□□□□ -0.59
RNF139-201ENST00000303545 HCG22E2RYF7 251 aa11.37□□□□□ -0.59
RNF139-201ENST00000303545 PSORS1C2Q9UIG4 136 aa11.37□□□□□ -0.59
RNF139-201ENST00000303545 DNAH6Q9C0G6 4158 aa11.36□□□□□ -0.59
RNF139-201ENST00000303545 SMIM26A0A096LP01 95 aa11.36□□□□□ -0.59
RNF139-201ENST00000303545 A0A0U1RQV1 116 aa11.36□□□□□ -0.59
RNF139-201ENST00000303545 NDUFC1O43677 76 aa11.35□□□□□ -0.59
RNF139-201ENST00000303545 IGLV5-52A0A0A0MRZ9 124 aa11.35□□□□□ -0.59
RNF139-201ENST00000303545 C1orf134Q5TEV5 83 aa11.34□□□□□ -0.59
RNF139-201ENST00000303545 PRO0628Q9UI54 55 aa11.33□□□□□ -0.6
RNF139-201ENST00000303545 LINC00472Q9H8W2 130 aa11.28□□□□□ -0.6
RNF139-201ENST00000303545 ATP5EP56381 51 aaPredicted RBP11.28□□□□□ -0.6
RNF139-201ENST00000303545 PLAC8Q9NZF1 115 aa11.26□□□□□ -0.61
RNF139-201ENST00000303545 MOBPQ13875 183 aa11.25□□□□□ -0.61
RNF139-201ENST00000303545 DNAH11Q96DT5 4516 aa11.25□□□□□ -0.61
RNF139-201ENST00000303545 DNAH5Q8TE73 4624 aa11.25□□□□□ -0.61
RNF139-201ENST00000303545 HYDINQ4G0P3 5121 aa11.24□□□□□ -0.61
RNF139-201ENST00000303545 PRR15Q8IV56 129 aa11.23□□□□□ -0.61
RNF139-201ENST00000303545 FAM229BQ4G0N7 80 aa11.22□□□□□ -0.61
RNF139-201ENST00000303545 A8MWP4 228 aa11.22□□□□□ -0.61
RNF139-201ENST00000303545 CASC2Q6XLA1 102 aa11.22□□□□□ -0.61
RNF139-201ENST00000303545 KRTAP10-2P60368 255 aa11.22□□□□□ -0.61
RNF139-201ENST00000303545 ZNF861PO60384 105 aa11.21□□□□□ -0.61
RNF139-201ENST00000303545 WWC2-AS2Q96NR7 200 aa11.21□□□□□ -0.61
RNF139-201ENST00000303545 LCE6AA0A183 80 aa11.21□□□□□ -0.62
RNF139-201ENST00000303545 LINC00483Q53H64 154 aa11.21□□□□□ -0.62
RNF139-201ENST00000303545 ALMS1Q8TCU4 4167 aa11.2□□□□□ -0.62
RNF139-201ENST00000303545 KRTAP29-1A8MX34 341 aaPredicted RBP11.2□□□□□ -0.62
RNF139-201ENST00000303545 PRR4Q16378 134 aa11.17□□□□□ -0.62
RNF139-201ENST00000303545 Q96NJ1 140 aa11.17□□□□□ -0.62
RNF139-201ENST00000303545 MPLKIPQ8TAP9 179 aa11.17□□□□□ -0.62
RNF139-201ENST00000303545 ZNF706Q9Y5V0 76 aaPredicted RBP11.17□□□□□ -0.62
RNF139-201ENST00000303545 BRK1Q8WUW1 75 aa11.15□□□□□ -0.62
RNF139-201ENST00000303545 ZCCHC13Q8WW36 166 aaKnown RBP11.15□□□□□ -0.62
RNF139-201ENST00000303545 CIRBP-AS1Q8TBR5 109 aa11.13□□□□□ -0.63
RNF139-201ENST00000303545 LINC00208Q96KT6 92 aa11.13□□□□□ -0.63
RNF139-201ENST00000303545 MMP24-AS1A0A0U1RRL7 71 aa11.12□□□□□ -0.63
RNF139-201ENST00000303545 IGLV7-43P04211 117 aa11.12□□□□□ -0.63
RNF139-201ENST00000303545 PKD1P98161 4303 aa11.12□□□□□ -0.63
RNF139-201ENST00000303545 NDUFB1O75438 58 aa11.1□□□□□ -0.63
RNF139-201ENST00000303545 IGHV6-1A0A0B4J1U7 121 aa11.09□□□□□ -0.63
RNF139-201ENST00000303545 H0Y9P7 68 aa11.09□□□□□ -0.63
RNF139-201ENST00000303545 MP68P56378 58 aa11.09□□□□□ -0.63
RNF139-201ENST00000303545 hDV103S1A0JD37 113 aa11.08□□□□□ -0.64
RNF139-201ENST00000303545 FAT2Q9NYQ8 4349 aa11.07□□□□□ -0.64
RNF139-201ENST00000303545 LRP1BQ9NZR2 4599 aa11.07□□□□□ -0.64
RNF139-201ENST00000303545 SPINK6Q6UWN8 80 aa11.06□□□□□ -0.64
RNF139-201ENST00000303545 KRTAP10-1P60331 282 aa11.04□□□□□ -0.64
RNF139-201ENST00000303545 A0A087X002 238 aa11.04□□□□□ -0.64
RNF139-201ENST00000303545 NOTCH2NLQ7Z3S9 236 aa11.04□□□□□ -0.64
RNF139-201ENST00000303545 TRAV22A0A0B4J277 110 aa11.02□□□□□ -0.65
RNF139-201ENST00000303545 C8orf17Q9NRJ1 99 aa11.02□□□□□ -0.65
RNF139-201ENST00000303545 NDUFS5O43920 106 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms