RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 UNC79Q9P2D8 2635 aa11.96□□□□□ -0.49
TSR1-201ENST00000301364 PRR26Q8N8Z3 221 aa11.95□□□□□ -0.5
TSR1-201ENST00000301364 TEX15Q9BXT5 2789 aa11.93□□□□□ -0.5
TSR1-201ENST00000301364 LINC00472Q9H8W2 130 aa11.93□□□□□ -0.5
TSR1-201ENST00000301364 LAMA1P25391 3075 aa11.92□□□□□ -0.5
TSR1-201ENST00000301364 C9orf92A6NGG3 77 aa11.92□□□□□ -0.5
TSR1-201ENST00000301364 FAM229BQ4G0N7 80 aa11.91□□□□□ -0.5
TSR1-201ENST00000301364 IGSF10Q6WRI0 2623 aa11.9□□□□□ -0.5
TSR1-201ENST00000301364 LCA10Q71F78 164 aa11.9□□□□□ -0.51
TSR1-201ENST00000301364 TNP2Q05952 138 aa11.89□□□□□ -0.51
TSR1-201ENST00000301364 Q75L30 129 aa11.88□□□□□ -0.51
TSR1-201ENST00000301364 Q8N9P0 234 aaPredicted RBP11.88□□□□□ -0.51
TSR1-201ENST00000301364 NBEAQ8NFP9 2946 aa11.88□□□□□ -0.51
TSR1-201ENST00000301364 PLAC8Q9NZF1 115 aa11.88□□□□□ -0.51
TSR1-201ENST00000301364 SMR3BP02814 79 aaPredicted RBP11.86□□□□□ -0.51
TSR1-201ENST00000301364 NBEAL2Q6ZNJ1 2754 aa11.85□□□□□ -0.51
TSR1-201ENST00000301364 CELSR3Q9NYQ7 3312 aa11.85□□□□□ -0.51
TSR1-201ENST00000301364 VCANP13611 3396 aa11.84□□□□□ -0.51
TSR1-201ENST00000301364 HRES1P13985 223 aa11.84□□□□□ -0.51
TSR1-201ENST00000301364 Q8N1X5 172 aa11.83□□□□□ -0.52
TSR1-201ENST00000301364 LINC01558Q9Y6Z2 57 aa11.83□□□□□ -0.52
TSR1-201ENST00000301364 SETXQ7Z333 2677 aaKnown RBP11.83□□□□□ -0.52
TSR1-201ENST00000301364 SZT2Q5T011 3432 aa11.82□□□□□ -0.52
TSR1-201ENST00000301364 OXTP01178 125 aa11.82□□□□□ -0.52
TSR1-201ENST00000301364 KRTAP4-16G5E9R7 235 aaPredicted RBP11.81□□□□□ -0.52
TSR1-201ENST00000301364 KRTAP1-5Q9BYS1 174 aa11.81□□□□□ -0.52
TSR1-201ENST00000301364 TEP1Q99973 2627 aaKnown RBP11.79□□□□□ -0.52
TSR1-201ENST00000301364 NOTCH1P46531 2555 aa11.79□□□□□ -0.52
TSR1-201ENST00000301364 COL6A5A8TX70 2615 aa11.77□□□□□ -0.52
TSR1-201ENST00000301364 DNAH14Q0VDD8 3507 aa11.77□□□□□ -0.53
TSR1-201ENST00000301364 KALRNO60229 2985 aa11.76□□□□□ -0.53
TSR1-201ENST00000301364 SPINT4Q6UDR6 99 aa11.76□□□□□ -0.53
TSR1-201ENST00000301364 STAB1Q9NY15 2570 aa11.74□□□□□ -0.53
TSR1-201ENST00000301364 NBEAL1Q6ZS30 2694 aa11.74□□□□□ -0.53
TSR1-201ENST00000301364 UBR5O95071 2799 aaPredicted RBP11.73□□□□□ -0.53
TSR1-201ENST00000301364 Q5VV11 94 aa11.71□□□□□ -0.53
TSR1-201ENST00000301364 ADGRG4Q8IZF6 3080 aa11.7□□□□□ -0.54
TSR1-201ENST00000301364 CRIPTQ9P021 101 aa11.7□□□□□ -0.54
TSR1-201ENST00000301364 FREM2Q5SZK8 3169 aa11.67□□□□□ -0.54
TSR1-201ENST00000301364 FLNCQ14315 2725 aa11.67□□□□□ -0.54
TSR1-201ENST00000301364 ATMQ13315 3056 aa11.66□□□□□ -0.54
TSR1-201ENST00000301364 Q5W150 140 aa11.65□□□□□ -0.54
TSR1-201ENST00000301364 KRTAP29-1A8MX34 341 aaPredicted RBP11.63□□□□□ -0.55
TSR1-201ENST00000301364 LINC00483Q53H64 154 aa11.63□□□□□ -0.55
TSR1-201ENST00000301364 ZCCHC13Q8WW36 166 aaKnown RBP11.62□□□□□ -0.55
TSR1-201ENST00000301364 ITPR1Q14643 2758 aa11.6□□□□□ -0.55
TSR1-201ENST00000301364 BOD1L1Q8NFC6 3051 aa11.6□□□□□ -0.55
TSR1-201ENST00000301364 RBM12B-AS1Q9P1G2 102 aa11.59□□□□□ -0.55
TSR1-201ENST00000301364 A0A1B0GU33 70 aa11.59□□□□□ -0.55
TSR1-201ENST00000301364 FRYLO94915 3013 aa11.57□□□□□ -0.56
TSR1-201ENST00000301364 Q6ZR54 194 aa11.56□□□□□ -0.56
TSR1-201ENST00000301364 J3QL48 77 aa11.55□□□□□ -0.56
TSR1-201ENST00000301364 LRBAP50851 2863 aa11.55□□□□□ -0.56
TSR1-201ENST00000301364 A0A0D9SG42 100 aa11.52□□□□□ -0.56
TSR1-201ENST00000301364 COL12A1Q99715 3063 aa11.52□□□□□ -0.57
TSR1-201ENST00000301364 SPINK7P58062 85 aa11.51□□□□□ -0.57
TSR1-201ENST00000301364 PANO1I0J062 215 aa11.49□□□□□ -0.57
TSR1-201ENST00000301364 COX6B2Q6YFQ2 88 aa11.48□□□□□ -0.57
TSR1-201ENST00000301364 TACC2O95359 2948 aa11.47□□□□□ -0.57
TSR1-201ENST00000301364 DMAC1Q96GE9 116 aa11.47□□□□□ -0.57
TSR1-201ENST00000301364 DMXL2Q8TDJ6 3036 aa11.47□□□□□ -0.57
TSR1-201ENST00000301364 COL6A3P12111 3177 aa11.45□□□□□ -0.58
TSR1-201ENST00000301364 NSD1Q96L73 2696 aaPredicted RBP11.44□□□□□ -0.58
TSR1-201ENST00000301364 LCE6AA0A183 80 aa11.44□□□□□ -0.58
TSR1-201ENST00000301364 ITPR2Q14571 2701 aa11.43□□□□□ -0.58
TSR1-201ENST00000301364 KRTAP7-1Q8IUC3 87 aa11.41□□□□□ -0.58
TSR1-201ENST00000301364 UTP20O75691 2785 aaKnown RBP11.38□□□□□ -0.59
TSR1-201ENST00000301364 LINC01554Q52M75 96 aa11.38□□□□□ -0.59
TSR1-201ENST00000301364 KRTAP10-1P60331 282 aa11.36□□□□□ -0.59
TSR1-201ENST00000301364 Q6ZSA8 131 aa11.36□□□□□ -0.59
TSR1-201ENST00000301364 KRTAP10-2P60368 255 aa11.35□□□□□ -0.59
TSR1-201ENST00000301364 KRTAP11-1Q8IUC1 163 aa11.34□□□□□ -0.59
TSR1-201ENST00000301364 PRAC1Q96KF2 57 aa11.34□□□□□ -0.59
TSR1-201ENST00000301364 STAB2Q8WWQ8 2551 aa11.33□□□□□ -0.6
TSR1-201ENST00000301364 ZZEF1O43149 2961 aa11.3□□□□□ -0.6
TSR1-201ENST00000301364 BAHCC1Q9P281 2608 aa11.3□□□□□ -0.6
TSR1-201ENST00000301364 ASH1LQ9NR48 2969 aaKnown RBP11.29□□□□□ -0.6
TSR1-201ENST00000301364 ASB16-AS1Q495Z4 193 aa11.28□□□□□ -0.6
TSR1-201ENST00000301364 Q6ZRN7 208 aaPredicted RBP11.28□□□□□ -0.6
TSR1-201ENST00000301364 A0A087X002 238 aa11.26□□□□□ -0.61
TSR1-201ENST00000301364 NOTCH2NLQ7Z3S9 236 aa11.26□□□□□ -0.61
TSR1-201ENST00000301364 NIPBLQ6KC79 2804 aaeCLIP11.24□□□□□ -0.619e-19■■■■■ 98.7
TSR1-201ENST00000301364 SPEGQ15772 3267 aa11.23□□□□□ -0.61
TSR1-201ENST00000301364 KMT2BQ9UMN6 2715 aaPredicted RBP11.23□□□□□ -0.61
TSR1-201ENST00000301364 S4R3F8 94 aa11.23□□□□□ -0.61
TSR1-201ENST00000301364 CSAG1Q6PB30 78 aa11.22□□□□□ -0.61
TSR1-201ENST00000301364 KRTAP13-1Q8IUC0 172 aa11.22□□□□□ -0.61
TSR1-201ENST00000301364 SPTBN5Q9NRC6 3674 aaKnown RBP11.22□□□□□ -0.61
TSR1-201ENST00000301364 ZANQ9Y493 2812 aa11.21□□□□□ -0.62
TSR1-201ENST00000301364 APCP25054 2843 aa11.2□□□□□ -0.62
TSR1-201ENST00000301364 REV3LO60673 3130 aa11.19□□□□□ -0.62
TSR1-201ENST00000301364 CFAP47Q6ZTR5 3102 aa11.18□□□□□ -0.62
TSR1-201ENST00000301364 HRNRQ86YZ3 2850 aaPredicted RBP11.16□□□□□ -0.62
TSR1-201ENST00000301364 EYSQ5T1H1 3165 aa11.15□□□□□ -0.62
TSR1-201ENST00000301364 HIVEP1P15822 2718 aa11.15□□□□□ -0.62
TSR1-201ENST00000301364 DMBT1Q9UGM3 2413 aaPredicted RBP11.15□□□□□ -0.63
TSR1-201ENST00000301364 TNRC18O15417 2968 aaPredicted RBP11.12□□□□□ -0.63
TSR1-201ENST00000301364 H1FX-AS1Q4G0G2 97 aa11.11□□□□□ -0.63
TSR1-201ENST00000301364 SPATA8Q6RVD6 105 aa11.11□□□□□ -0.63
TSR1-201ENST00000301364 CELSR2Q9HCU4 2923 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms