RNA–Protein interactions for RNA: ENST00000295006.5

CAPN2-201, Transcript of calpain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN2, Length 3,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2-201ENST00000295006 FAM229BQ4G0N7 80 aa9.8□□□□□ -0.84
CAPN2-201ENST00000295006 TLX1NBP0CAT3 122 aa9.8□□□□□ -0.84
CAPN2-201ENST00000295006 DSCR10P59022 87 aa9.8□□□□□ -0.84
CAPN2-201ENST00000295006 SRRM2Q9UQ35 2752 aaKnown RBP9.8□□□□□ -0.84
CAPN2-201ENST00000295006 CDK2AP2O75956 126 aa9.8□□□□□ -0.84
CAPN2-201ENST00000295006 CASC2Q6XLA1 102 aa9.78□□□□□ -0.84
CAPN2-201ENST00000295006 KRTAP7-1Q8IUC3 87 aa9.78□□□□□ -0.84
CAPN2-201ENST00000295006 KRTAP1-5Q9BYS1 174 aa9.78□□□□□ -0.84
CAPN2-201ENST00000295006 FP248Q71RG6 208 aaPredicted RBP9.78□□□□□ -0.84
CAPN2-201ENST00000295006 C16orf90A8MZG2 172 aa9.78□□□□□ -0.84
CAPN2-201ENST00000295006 NDUFB1O75438 58 aa9.78□□□□□ -0.84
CAPN2-201ENST00000295006 SPINK6Q6UWN8 80 aa9.77□□□□□ -0.85
CAPN2-201ENST00000295006 CSMD3Q7Z407 3707 aa9.77□□□□□ -0.85
CAPN2-201ENST00000295006 C14orf177Q52M58 125 aa9.75□□□□□ -0.85
CAPN2-201ENST00000295006 PCOTHQ58A44 107 aa9.75□□□□□ -0.85
CAPN2-201ENST00000295006 PLA2G2DQ9UNK4 145 aa9.74□□□□□ -0.85
CAPN2-201ENST00000295006 H0Y9P7 68 aa9.73□□□□□ -0.85
CAPN2-201ENST00000295006 SPRR1AP35321 89 aa9.72□□□□□ -0.85
CAPN2-201ENST00000295006 KRTAP4-16G5E9R7 235 aaPredicted RBP9.72□□□□□ -0.85
CAPN2-201ENST00000295006 C1orf64Q8NEQ6 169 aa9.71□□□□□ -0.85
CAPN2-201ENST00000295006 ANAPC11Q9NYG5 84 aa9.7□□□□□ -0.86
CAPN2-201ENST00000295006 MDFIQ99750 246 aa9.69□□□□□ -0.86
CAPN2-201ENST00000295006 PRO0628Q9UI54 55 aa9.69□□□□□ -0.86
CAPN2-201ENST00000295006 IGHV6-1A0A0B4J1U7 121 aa9.69□□□□□ -0.86
CAPN2-201ENST00000295006 SPRR4Q96PI1 79 aa9.69□□□□□ -0.86
CAPN2-201ENST00000295006 IGLV5-37A0A075B6J1 123 aa9.68□□□□□ -0.86
CAPN2-201ENST00000295006 TNP2Q05952 138 aa9.67□□□□□ -0.86
CAPN2-201ENST00000295006 KRTAP11-1Q8IUC1 163 aa9.65□□□□□ -0.86
CAPN2-201ENST00000295006 A0A1B0GW54 56 aa9.65□□□□□ -0.86
CAPN2-201ENST00000295006 MOBPQ13875 183 aa9.62□□□□□ -0.87
CAPN2-201ENST00000295006 SPTSSBQ8NFR3 76 aa9.62□□□□□ -0.87
CAPN2-201ENST00000295006 COL7A1Q02388 2944 aa9.62□□□□□ -0.87
CAPN2-201ENST00000295006 C1orf195Q5TG92 126 aa9.62□□□□□ -0.87
CAPN2-201ENST00000295006 NBDYA0A0U1RRE5 68 aa9.61□□□□□ -0.87
CAPN2-201ENST00000295006 PANO1I0J062 215 aa9.6□□□□□ -0.87
CAPN2-201ENST00000295006 PRR15Q8IV56 129 aa9.59□□□□□ -0.87
CAPN2-201ENST00000295006 V9GYY9 64 aa9.59□□□□□ -0.87
CAPN2-201ENST00000295006 hDV103S1A0JD37 113 aa9.59□□□□□ -0.87
CAPN2-201ENST00000295006 CHKB-CPT1BH3BT56 60 aa9.59□□□□□ -0.87
CAPN2-201ENST00000295006 C9orf163Q8N9P6 203 aa9.59□□□□□ -0.87
CAPN2-201ENST00000295006 A8MUN3 132 aa9.58□□□□□ -0.88
CAPN2-201ENST00000295006 CIRBP-AS1Q8TBR5 109 aa9.58□□□□□ -0.88
CAPN2-201ENST00000295006 RETNLBQ9BQ08 111 aa9.58□□□□□ -0.88
CAPN2-201ENST00000295006 CNBPP62633 177 aaKnown RBP9.57□□□□□ -0.88
CAPN2-201ENST00000295006 APLNQ9ULZ1 77 aa9.57□□□□□ -0.88
CAPN2-201ENST00000295006 A8MWP4 228 aa9.57□□□□□ -0.88
CAPN2-201ENST00000295006 PRR15LQ9BU68 103 aa9.57□□□□□ -0.88
CAPN2-201ENST00000295006 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.55□□□□□ -0.88
CAPN2-201ENST00000295006 TRAV22A0A0B4J277 110 aa9.54□□□□□ -0.88
CAPN2-201ENST00000295006 LY6G6CO95867 125 aa9.54□□□□□ -0.88
CAPN2-201ENST00000295006 NUPR2A6NF83 97 aa9.51□□□□□ -0.89
CAPN2-201ENST00000295006 TGP01266 2768 aa9.51□□□□□ -0.89
CAPN2-201ENST00000295006 SEC61GP60059 68 aa9.5□□□□□ -0.89
CAPN2-201ENST00000295006 A6NED7 52 aa9.5□□□□□ -0.89
CAPN2-201ENST00000295006 IGLV5-52A0A0A0MRZ9 124 aa9.49□□□□□ -0.89
CAPN2-201ENST00000295006 RTL8CO15255 209 aa9.48□□□□□ -0.89
CAPN2-201ENST00000295006 SPAG11AQ6PDA7 123 aa9.47□□□□□ -0.89
CAPN2-201ENST00000295006 PSORS1C2Q9UIG4 136 aa9.46□□□□□ -0.9
CAPN2-201ENST00000295006 LINC00472Q9H8W2 130 aa9.44□□□□□ -0.9
CAPN2-201ENST00000295006 PMAIP1Q13794 54 aa9.44□□□□□ -0.9
CAPN2-201ENST00000295006 ZNF706Q9Y5V0 76 aaPredicted RBP9.44□□□□□ -0.9
CAPN2-201ENST00000295006 A0A087WTM6 91 aa9.43□□□□□ -0.9
CAPN2-201ENST00000295006 ZCCHC13Q8WW36 166 aaKnown RBP9.41□□□□□ -0.9
CAPN2-201ENST00000295006 C8orf17Q9NRJ1 99 aa9.41□□□□□ -0.9
CAPN2-201ENST00000295006 COA5Q86WW8 74 aa9.41□□□□□ -0.9
CAPN2-201ENST00000295006 ANK2Q01484 3957 aa9.4□□□□□ -0.9
CAPN2-201ENST00000295006 IGLV8-61A0A075B6I0 122 aa9.39□□□□□ -0.91
CAPN2-201ENST00000295006 MMP24-AS1A0A0U1RRL7 71 aa9.39□□□□□ -0.91
CAPN2-201ENST00000295006 KRTAP29-1A8MX34 341 aaPredicted RBP9.37□□□□□ -0.91
CAPN2-201ENST00000295006 C1orf134Q5TEV5 83 aa9.37□□□□□ -0.91
CAPN2-201ENST00000295006 A0A1B0GVX0 72 aa9.34□□□□□ -0.91
CAPN2-201ENST00000295006 CYP4F30PQ9H0H9 118 aa9.34□□□□□ -0.91
CAPN2-201ENST00000295006 SPACA4Q8TDM5 124 aa9.34□□□□□ -0.91
CAPN2-201ENST00000295006 MRPL34Q9BQ48 92 aaKnown RBP9.34□□□□□ -0.91
CAPN2-201ENST00000295006 A8MU10 97 aa9.33□□□□□ -0.92
CAPN2-201ENST00000295006 ZNF861PO60384 105 aa9.33□□□□□ -0.92
CAPN2-201ENST00000295006 SPRR1BP22528 89 aa9.33□□□□□ -0.92
CAPN2-201ENST00000295006 H3BPC8 53 aa9.33□□□□□ -0.92
CAPN2-201ENST00000295006 Q1T7F1 81 aa9.33□□□□□ -0.92
CAPN2-201ENST00000295006 A0A087X002 238 aa9.32□□□□□ -0.92
CAPN2-201ENST00000295006 LCE6AA0A183 80 aa9.32□□□□□ -0.92
CAPN2-201ENST00000295006 NOTCH2NLQ7Z3S9 236 aa9.32□□□□□ -0.92
CAPN2-201ENST00000295006 TP53AIP1Q9HCN2 124 aa9.32□□□□□ -0.92
CAPN2-201ENST00000295006 LIMD2Q9BT23 127 aa9.32□□□□□ -0.92
CAPN2-201ENST00000295006 CD164Q04900 197 aa9.29□□□□□ -0.92
CAPN2-201ENST00000295006 DNAH10Q8IVF4 4471 aa9.29□□□□□ -0.92
CAPN2-201ENST00000295006 Q8N9P0 234 aaPredicted RBP9.27□□□□□ -0.93
CAPN2-201ENST00000295006 FBN3Q75N90 2809 aa9.27□□□□□ -0.93
CAPN2-201ENST00000295006 PRR26Q8N8Z3 221 aa9.27□□□□□ -0.93
CAPN2-201ENST00000295006 C4orf48Q5BLP8 95 aa9.26□□□□□ -0.93
CAPN2-201ENST00000295006 WWC2-AS2Q96NR7 200 aa9.25□□□□□ -0.93
CAPN2-201ENST00000295006 SPANXA2-OT1Q8N9U9 137 aa9.25□□□□□ -0.93
CAPN2-201ENST00000295006 IGKV2D-30A0A075B6S6 120 aa9.24□□□□□ -0.93
CAPN2-201ENST00000295006 IGKV2-30P06310 120 aa9.24□□□□□ -0.93
CAPN2-201ENST00000295006 Q6ZRN7 208 aaPredicted RBP9.24□□□□□ -0.93
CAPN2-201ENST00000295006 Q5VV11 94 aa9.24□□□□□ -0.93
CAPN2-201ENST00000295006 HUWE1Q7Z6Z7 4374 aaKnown RBP9.22□□□□□ -0.93
CAPN2-201ENST00000295006 IGLV7-43P04211 117 aa9.22□□□□□ -0.93
CAPN2-201ENST00000295006 IGLV7-46A0A075B6I9 117 aa9.21□□□□□ -0.94
CAPN2-201ENST00000295006 SPINK1P00995 79 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms