RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 Q8N9L7 120 aa12.01□□□□□ -0.49
BRAF-201ENST00000288602 Q6ZR54 194 aa12□□□□□ -0.49
BRAF-201ENST00000288602 LINC00474Q9P2X8 69 aa11.99□□□□□ -0.49
BRAF-201ENST00000288602 C20orf197Q8N268 126 aa11.99□□□□□ -0.49
BRAF-201ENST00000288602 LINC00476Q8WZB0 136 aa11.98□□□□□ -0.49
BRAF-201ENST00000288602 LY6G6CO95867 125 aa11.97□□□□□ -0.49
BRAF-201ENST00000288602 UBE2AP49459 152 aa11.96□□□□□ -0.49
BRAF-201ENST00000288602 Q8NBF4 154 aa11.96□□□□□ -0.49
BRAF-201ENST00000288602 SPACA4Q8TDM5 124 aa11.96□□□□□ -0.49
BRAF-201ENST00000288602 RTL8CO15255 209 aa11.95□□□□□ -0.5
BRAF-201ENST00000288602 C4orf26Q17RF5 130 aa11.95□□□□□ -0.5
BRAF-201ENST00000288602 F8WEM9 126 aa11.95□□□□□ -0.5
BRAF-201ENST00000288602 PKIGQ9Y2B9 76 aa11.94□□□□□ -0.5
BRAF-201ENST00000288602 FRAS1Q86XX4 4008 aa11.93□□□□□ -0.5
BRAF-201ENST00000288602 IGFL1Q6UW32 110 aa11.93□□□□□ -0.5
BRAF-201ENST00000288602 BPY2O14599 106 aa11.92□□□□□ -0.5
BRAF-201ENST00000288602 Q5XG85 94 aa11.92□□□□□ -0.5
BRAF-201ENST00000288602 C1orf134Q5TEV5 83 aa11.91□□□□□ -0.5
BRAF-201ENST00000288602 SPRR4Q96PI1 79 aa11.91□□□□□ -0.5
BRAF-201ENST00000288602 H0Y9J4 135 aa11.89□□□□□ -0.51
BRAF-201ENST00000288602 HRCT1Q6UXD1 115 aa11.89□□□□□ -0.51
BRAF-201ENST00000288602 DNAH17Q9UFH2 4485 aa11.89□□□□□ -0.51
BRAF-201ENST00000288602 BCE1O60756 84 aa11.89□□□□□ -0.51
BRAF-201ENST00000288602 FAM236DA0A1B0GTK5 79 aa11.88□□□□□ -0.51
BRAF-201ENST00000288602 FAM236CP0DP71 79 aa11.88□□□□□ -0.51
BRAF-201ENST00000288602 IGKV4-1P06312 121 aa11.88□□□□□ -0.51
BRAF-201ENST00000288602 TRAV7A0A075B6U4 112 aa11.87□□□□□ -0.51
BRAF-201ENST00000288602 DNAH6Q9C0G6 4158 aa11.86□□□□□ -0.51
BRAF-201ENST00000288602 IGLV5-52A0A0A0MRZ9 124 aa11.85□□□□□ -0.51
BRAF-201ENST00000288602 KRTAP13-1Q8IUC0 172 aa11.85□□□□□ -0.51
BRAF-201ENST00000288602 H7BZZ5 65 aa11.84□□□□□ -0.51
BRAF-201ENST00000288602 DNAH8Q96JB1 4490 aa11.84□□□□□ -0.51
BRAF-201ENST00000288602 A0A1B0GW54 56 aa11.83□□□□□ -0.52
BRAF-201ENST00000288602 SNURFQ9Y675 71 aa11.83□□□□□ -0.52
BRAF-201ENST00000288602 DEFB116Q30KQ4 102 aa11.82□□□□□ -0.52
BRAF-201ENST00000288602 IGLV8-61A0A075B6I0 122 aa11.82□□□□□ -0.52
BRAF-201ENST00000288602 HYDINQ4G0P3 5121 aa11.81□□□□□ -0.52
BRAF-201ENST00000288602 A0A087WSZ3 146 aa11.81□□□□□ -0.52
BRAF-201ENST00000288602 SPRR1BP22528 89 aa11.8□□□□□ -0.52
BRAF-201ENST00000288602 PSORS1C2Q9UIG4 136 aa11.8□□□□□ -0.52
BRAF-201ENST00000288602 SERP1Q9Y6X1 66 aa11.78□□□□□ -0.52
BRAF-201ENST00000288602 DSCR10P59022 87 aa11.78□□□□□ -0.52
BRAF-201ENST00000288602 KLKP1Q107X0 134 aa11.78□□□□□ -0.52
BRAF-201ENST00000288602 WWC2-AS2Q96NR7 200 aa11.77□□□□□ -0.53
BRAF-201ENST00000288602 PLAC8Q9NZF1 115 aa11.77□□□□□ -0.53
BRAF-201ENST00000288602 K7EQZ3 153 aa11.75□□□□□ -0.53
BRAF-201ENST00000288602 DNAH5Q8TE73 4624 aa11.74□□□□□ -0.53
BRAF-201ENST00000288602 KRTAP10-2P60368 255 aa11.74□□□□□ -0.53
BRAF-201ENST00000288602 IGLV9-49A0A0B4J1Y8 123 aa11.74□□□□□ -0.53
BRAF-201ENST00000288602 ANAPC11Q9NYG5 84 aa11.71□□□□□ -0.53
BRAF-201ENST00000288602 DNAH11Q96DT5 4516 aa11.71□□□□□ -0.53
BRAF-201ENST00000288602 FAM30AQ9NZY2 134 aa11.69□□□□□ -0.54
BRAF-201ENST00000288602 RPL37AP61513 92 aaKnown RBP11.69□□□□□ -0.54
BRAF-201ENST00000288602 KRTAP21-3Q3LHN1 58 aa11.68□□□□□ -0.54
BRAF-201ENST00000288602 ALMS1Q8TCU4 4167 aa11.66□□□□□ -0.54
BRAF-201ENST00000288602 ZNF861PO60384 105 aa11.65□□□□□ -0.54
BRAF-201ENST00000288602 OCR1Q9BZK8 76 aa11.65□□□□□ -0.54
BRAF-201ENST00000288602 PKD1P98161 4303 aa11.64□□□□□ -0.55
BRAF-201ENST00000288602 FAT2Q9NYQ8 4349 aa11.64□□□□□ -0.55
BRAF-201ENST00000288602 FP248Q71RG6 208 aaPredicted RBP11.63□□□□□ -0.55
BRAF-201ENST00000288602 CIRBP-AS1Q8TBR5 109 aa11.63□□□□□ -0.55
BRAF-201ENST00000288602 SMIM26A0A096LP01 95 aa11.62□□□□□ -0.55
BRAF-201ENST00000288602 NDUFC1O43677 76 aa11.62□□□□□ -0.55
BRAF-201ENST00000288602 LINC00483Q53H64 154 aa11.62□□□□□ -0.55
BRAF-201ENST00000288602 LINC00336Q6ZUF6 198 aa11.61□□□□□ -0.55
BRAF-201ENST00000288602 TMEM254Q8TBM7 123 aa11.61□□□□□ -0.55
BRAF-201ENST00000288602 MOBPQ13875 183 aa11.59□□□□□ -0.55
BRAF-201ENST00000288602 ZNF706Q9Y5V0 76 aaPredicted RBP11.59□□□□□ -0.55
BRAF-201ENST00000288602 LINC00472Q9H8W2 130 aa11.58□□□□□ -0.56
BRAF-201ENST00000288602 HCG22E2RYF7 251 aa11.58□□□□□ -0.56
BRAF-201ENST00000288602 IGLV7-43P04211 117 aa11.58□□□□□ -0.56
BRAF-201ENST00000288602 WFDC13Q8IUB5 93 aa11.58□□□□□ -0.56
BRAF-201ENST00000288602 KRTAP10-1P60331 282 aa11.56□□□□□ -0.56
BRAF-201ENST00000288602 ATP5EP56381 51 aaPredicted RBP11.55□□□□□ -0.56
BRAF-201ENST00000288602 PRO0628Q9UI54 55 aa11.53□□□□□ -0.56
BRAF-201ENST00000288602 LRP1BQ9NZR2 4599 aa11.52□□□□□ -0.57
BRAF-201ENST00000288602 A0A0U1RQV1 116 aa11.5□□□□□ -0.57
BRAF-201ENST00000288602 FAM229BQ4G0N7 80 aa11.49□□□□□ -0.57
BRAF-201ENST00000288602 PRR15Q8IV56 129 aa11.49□□□□□ -0.57
BRAF-201ENST00000288602 A8MWP4 228 aa11.49□□□□□ -0.57
BRAF-201ENST00000288602 Q96NJ1 140 aa11.48□□□□□ -0.57
BRAF-201ENST00000288602 Q6ZSA8 131 aa11.47□□□□□ -0.57
BRAF-201ENST00000288602 PKHD1P08F94 4074 aa11.46□□□□□ -0.57
BRAF-201ENST00000288602 SACSQ9NZJ4 4579 aa11.45□□□□□ -0.58
BRAF-201ENST00000288602 MPLKIPQ8TAP9 179 aa11.45□□□□□ -0.58
BRAF-201ENST00000288602 VPS13BQ7Z7G8 4022 aa11.44□□□□□ -0.58
BRAF-201ENST00000288602 KRTAP29-1A8MX34 341 aaPredicted RBP11.44□□□□□ -0.58
BRAF-201ENST00000288602 CASC2Q6XLA1 102 aa11.43□□□□□ -0.58
BRAF-201ENST00000288602 BRK1Q8WUW1 75 aa11.4□□□□□ -0.59
BRAF-201ENST00000288602 LCE6AA0A183 80 aa11.39□□□□□ -0.59
BRAF-201ENST00000288602 NDUFB1O75438 58 aa11.37□□□□□ -0.59
BRAF-201ENST00000288602 MMP24-AS1A0A0U1RRL7 71 aa11.36□□□□□ -0.59
BRAF-201ENST00000288602 A0A087X002 238 aa11.35□□□□□ -0.59
BRAF-201ENST00000288602 IGHV6-1A0A0B4J1U7 121 aa11.33□□□□□ -0.6
BRAF-201ENST00000288602 SPINK6Q6UWN8 80 aa11.33□□□□□ -0.6
BRAF-201ENST00000288602 hDV103S1A0JD37 113 aa11.31□□□□□ -0.6
BRAF-201ENST00000288602 ZCCHC13Q8WW36 166 aaKnown RBP11.3□□□□□ -0.6
BRAF-201ENST00000288602 KRTAP13-2Q52LG2 175 aa11.29□□□□□ -0.6
BRAF-201ENST00000288602 NOTCH2NLQ7Z3S9 236 aa11.28□□□□□ -0.6
BRAF-201ENST00000288602 A0A1B0GVX0 72 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms