RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 TENM4Q6N022 2769 aa6.31□□□□□ -1.4
HMGCR-201ENST00000287936 KRTAP1-5Q9BYS1 174 aa6.31□□□□□ -1.4
HMGCR-201ENST00000287936 C1orf134Q5TEV5 83 aa6.3□□□□□ -1.4
HMGCR-201ENST00000287936 RTL8CO15255 209 aa6.3□□□□□ -1.4
HMGCR-201ENST00000287936 SPRR1BP22528 89 aa6.3□□□□□ -1.4
HMGCR-201ENST00000287936 TP53AIP1Q9HCN2 124 aa6.29□□□□□ -1.4
HMGCR-201ENST00000287936 C1orf64Q8NEQ6 169 aa6.29□□□□□ -1.4
HMGCR-201ENST00000287936 NIPBLQ6KC79 2804 aaeCLIP6.29□□□□□ -1.4
HMGCR-201ENST00000287936 KRTAP7-1Q8IUC3 87 aa6.29□□□□□ -1.4
HMGCR-201ENST00000287936 IGHV6-1A0A0B4J1U7 121 aa6.28□□□□□ -1.4
HMGCR-201ENST00000287936 A0A087WTM6 91 aa6.27□□□□□ -1.41
HMGCR-201ENST00000287936 LY6G6CO95867 125 aa6.27□□□□□ -1.41
HMGCR-201ENST00000287936 OXTP01178 125 aa6.27□□□□□ -1.41
HMGCR-201ENST00000287936 MOBPQ13875 183 aa6.27□□□□□ -1.41
HMGCR-201ENST00000287936 CSMD2Q7Z408 3487 aa6.27□□□□□ -1.41
HMGCR-201ENST00000287936 PRO0628Q9UI54 55 aa6.27□□□□□ -1.41
HMGCR-201ENST00000287936 LRCOL1A6NCL2 159 aa6.26□□□□□ -1.41
HMGCR-201ENST00000287936 TRAV22A0A0B4J277 110 aa6.26□□□□□ -1.41
HMGCR-201ENST00000287936 SPINK6Q6UWN8 80 aa6.26□□□□□ -1.41
HMGCR-201ENST00000287936 Q5XG85 94 aa6.26□□□□□ -1.41
HMGCR-201ENST00000287936 VPS13CQ709C8 3753 aa6.25□□□□□ -1.41
HMGCR-201ENST00000287936 STAB1Q9NY15 2570 aa6.25□□□□□ -1.41
HMGCR-201ENST00000287936 NOTCH1P46531 2555 aa6.23□□□□□ -1.41
HMGCR-201ENST00000287936 ZFHX3Q15911 3703 aa6.23□□□□□ -1.41
HMGCR-201ENST00000287936 CIRBP-AS1Q8TBR5 109 aa6.23□□□□□ -1.41
HMGCR-201ENST00000287936 ZNF861PO60384 105 aa6.22□□□□□ -1.41
HMGCR-201ENST00000287936 SPACA4Q8TDM5 124 aa6.22□□□□□ -1.41
HMGCR-201ENST00000287936 C4orf48Q5BLP8 95 aa6.21□□□□□ -1.42
HMGCR-201ENST00000287936 PCOTHQ58A44 107 aa6.21□□□□□ -1.42
HMGCR-201ENST00000287936 C8orf17Q9NRJ1 99 aa6.2□□□□□ -1.42
HMGCR-201ENST00000287936 MGAM2Q2M2H8 2515 aa6.2□□□□□ -1.42
HMGCR-201ENST00000287936 SPANXA2-OT1Q8N9U9 137 aa6.2□□□□□ -1.42
HMGCR-201ENST00000287936 CYP4F30PQ9H0H9 118 aa6.2□□□□□ -1.42
HMGCR-201ENST00000287936 PSORS1C2Q9UIG4 136 aa6.2□□□□□ -1.42
HMGCR-201ENST00000287936 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.2□□□□□ -1.42
HMGCR-201ENST00000287936 COL6A5A8TX70 2615 aa6.19□□□□□ -1.42
HMGCR-201ENST00000287936 LINC00472Q9H8W2 130 aa6.19□□□□□ -1.42
HMGCR-201ENST00000287936 A0A1B0GVX0 72 aa6.18□□□□□ -1.42
HMGCR-201ENST00000287936 CHKB-CPT1BH3BT56 60 aa6.18□□□□□ -1.42
HMGCR-201ENST00000287936 PSPHP1O15172 72 aa6.18□□□□□ -1.42
HMGCR-201ENST00000287936 FP248Q71RG6 208 aaPredicted RBP6.18□□□□□ -1.42
HMGCR-201ENST00000287936 LIMD2Q9BT23 127 aa6.18□□□□□ -1.42
HMGCR-201ENST00000287936 MRPL34Q9BQ48 92 aaKnown RBP6.18□□□□□ -1.42
HMGCR-201ENST00000287936 LCE6AA0A183 80 aa6.17□□□□□ -1.42
HMGCR-201ENST00000287936 LINC00336Q6ZUF6 198 aa6.17□□□□□ -1.42
HMGCR-201ENST00000287936 TENM1Q9UKZ4 2725 aa6.16□□□□□ -1.42
HMGCR-201ENST00000287936 VWFP04275 2813 aa6.16□□□□□ -1.42
HMGCR-201ENST00000287936 PRR15LQ9BU68 103 aa6.15□□□□□ -1.42
HMGCR-201ENST00000287936 ZCCHC13Q8WW36 166 aaKnown RBP6.15□□□□□ -1.42
HMGCR-201ENST00000287936 MMP24-AS1A0A0U1RRL7 71 aa6.15□□□□□ -1.43
HMGCR-201ENST00000287936 PLAC8Q9NZF1 115 aa6.15□□□□□ -1.43
HMGCR-201ENST00000287936 OTOGQ6ZRI0 2925 aa6.14□□□□□ -1.43
HMGCR-201ENST00000287936 SSBP3-AS1Q7Z2R9 100 aa6.14□□□□□ -1.43
HMGCR-201ENST00000287936 IGLV7-43P04211 117 aa6.14□□□□□ -1.43
HMGCR-201ENST00000287936 KRTAP29-1A8MX34 341 aaPredicted RBP6.14□□□□□ -1.43
HMGCR-201ENST00000287936 C8orf87E5RJ46 101 aa6.14□□□□□ -1.43
HMGCR-201ENST00000287936 C1orf195Q5TG92 126 aa6.14□□□□□ -1.43
HMGCR-201ENST00000287936 KRTAP11-1Q8IUC1 163 aa6.13□□□□□ -1.43
HMGCR-201ENST00000287936 Q6ZRN7 208 aaPredicted RBP6.13□□□□□ -1.43
HMGCR-201ENST00000287936 FAM229BQ4G0N7 80 aa6.13□□□□□ -1.43
HMGCR-201ENST00000287936 LOC101927531A0A1B0GV80 90 aa6.12□□□□□ -1.43
HMGCR-201ENST00000287936 LINC00483Q53H64 154 aa6.12□□□□□ -1.43
HMGCR-201ENST00000287936 Q1T7F1 81 aa6.12□□□□□ -1.43
HMGCR-201ENST00000287936 AKAP9Q99996 3911 aa6.12□□□□□ -1.43
HMGCR-201ENST00000287936 PANO1I0J062 215 aa6.11□□□□□ -1.43
HMGCR-201ENST00000287936 NBPF19A0A087WUL8 3843 aa6.11□□□□□ -1.43
HMGCR-201ENST00000287936 A6NED7 52 aa6.11□□□□□ -1.43
HMGCR-201ENST00000287936 ANAPC11Q9NYG5 84 aa6.11□□□□□ -1.43
HMGCR-201ENST00000287936 COA5Q86WW8 74 aa6.11□□□□□ -1.43
HMGCR-201ENST00000287936 TENM3Q9P273 2699 aa6.1□□□□□ -1.43
HMGCR-201ENST00000287936 CD164Q04900 197 aa6.09□□□□□ -1.43
HMGCR-201ENST00000287936 KRTAP13-1Q8IUC0 172 aa6.09□□□□□ -1.43
HMGCR-201ENST00000287936 NBEAL1Q6ZS30 2694 aa6.09□□□□□ -1.44
HMGCR-201ENST00000287936 ZNF469Q96JG9 3925 aaPredicted RBP6.08□□□□□ -1.44
HMGCR-201ENST00000287936 WWC2-AS2Q96NR7 200 aa6.08□□□□□ -1.44
HMGCR-201ENST00000287936 LINC00313P59037 77 aa6.08□□□□□ -1.44
HMGCR-201ENST00000287936 A8MUN3 132 aa6.07□□□□□ -1.44
HMGCR-201ENST00000287936 SPTSSBQ8NFR3 76 aa6.07□□□□□ -1.44
HMGCR-201ENST00000287936 IGLV7-46A0A075B6I9 117 aa6.06□□□□□ -1.44
HMGCR-201ENST00000287936 Q6ZR54 194 aa6.06□□□□□ -1.44
HMGCR-201ENST00000287936 FAM229AH3BQW9 127 aa6.05□□□□□ -1.44
HMGCR-201ENST00000287936 ACYP2P14621 99 aa6.05□□□□□ -1.44
HMGCR-201ENST00000287936 BAHCC1Q9P281 2608 aa6.02□□□□□ -1.45
HMGCR-201ENST00000287936 SPAG11AQ6PDA7 123 aa6.02□□□□□ -1.45
HMGCR-201ENST00000287936 RETNLBQ9BQ08 111 aa6.02□□□□□ -1.45
HMGCR-201ENST00000287936 PMAIP1Q13794 54 aa6.01□□□□□ -1.45
HMGCR-201ENST00000287936 STAB2Q8WWQ8 2551 aa6□□□□□ -1.45
HMGCR-201ENST00000287936 TYMSOSQ8TAI1 123 aa5.99□□□□□ -1.45
HMGCR-201ENST00000287936 Q96NJ1 140 aa5.99□□□□□ -1.45
HMGCR-201ENST00000287936 Q8N9P0 234 aaPredicted RBP5.98□□□□□ -1.45
HMGCR-201ENST00000287936 IGKV2D-30A0A075B6S6 120 aa5.96□□□□□ -1.46
HMGCR-201ENST00000287936 IGKV2-30P06310 120 aa5.96□□□□□ -1.46
HMGCR-201ENST00000287936 SEC61GP60059 68 aa5.96□□□□□ -1.46
HMGCR-201ENST00000287936 CUBNO60494 3623 aa5.96□□□□□ -1.46
HMGCR-201ENST00000287936 PLA2G1BP04054 148 aaKnown RBP5.96□□□□□ -1.46
HMGCR-201ENST00000287936 TRRAPQ9Y4A5 3859 aa5.92□□□□□ -1.46
HMGCR-201ENST00000287936 ASB16-AS1Q495Z4 193 aa5.92□□□□□ -1.46
HMGCR-201ENST00000287936 Q75L30 129 aa5.92□□□□□ -1.46
HMGCR-201ENST00000287936 Q5VV11 94 aa5.92□□□□□ -1.46
HMGCR-201ENST00000287936 LINC01558Q9Y6Z2 57 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms