RNA–Protein interactions for RNA: ENST00000272930.8

UBE2F-201, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2F, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-201ENST00000272930 DPH3Q96FX2 82 aa12.52□□□□□ -0.4
UBE2F-201ENST00000272930 BCE1O60756 84 aa12.52□□□□□ -0.41
UBE2F-201ENST00000272930 SPRR1BP22528 89 aa12.51□□□□□ -0.41
UBE2F-201ENST00000272930 UBE2AP49459 152 aa12.5□□□□□ -0.41
UBE2F-201ENST00000272930 C1orf134Q5TEV5 83 aa12.5□□□□□ -0.41
UBE2F-201ENST00000272930 KRTAP13-1Q8IUC0 172 aa12.5□□□□□ -0.41
UBE2F-201ENST00000272930 C9orf153Q5TBE3 101 aa12.5□□□□□ -0.41
UBE2F-201ENST00000272930 TGP01266 2768 aa12.49□□□□□ -0.41
UBE2F-201ENST00000272930 CRYGAP11844 174 aa12.48□□□□□ -0.41
UBE2F-201ENST00000272930 IGFL1Q6UW32 110 aa12.48□□□□□ -0.41
UBE2F-201ENST00000272930 BPY2O14599 106 aa12.47□□□□□ -0.41
UBE2F-201ENST00000272930 LY6G6CO95867 125 aa12.47□□□□□ -0.41
UBE2F-201ENST00000272930 IGKV4-1P06312 121 aa12.44□□□□□ -0.42
UBE2F-201ENST00000272930 SRRM2Q9UQ35 2752 aaKnown RBP12.43□□□□□ -0.42
UBE2F-201ENST00000272930 ALMS1Q8TCU4 4167 aa12.42□□□□□ -0.42
UBE2F-201ENST00000272930 DNAH8Q96JB1 4490 aa12.42□□□□□ -0.42
UBE2F-201ENST00000272930 WWC2-AS2Q96NR7 200 aa12.42□□□□□ -0.42
UBE2F-201ENST00000272930 PLAC8Q9NZF1 115 aa12.42□□□□□ -0.42
UBE2F-201ENST00000272930 SS18L2Q9UHA2 77 aa12.42□□□□□ -0.42
UBE2F-201ENST00000272930 IGLV5-52A0A0A0MRZ9 124 aa12.42□□□□□ -0.42
UBE2F-201ENST00000272930 A0A0G2JQZ4 141 aa12.42□□□□□ -0.42
UBE2F-201ENST00000272930 Q8N9L7 120 aa12.42□□□□□ -0.42
UBE2F-201ENST00000272930 SMIM20Q8N5G0 67 aa12.39□□□□□ -0.43
UBE2F-201ENST00000272930 TRAV7A0A075B6U4 112 aa12.38□□□□□ -0.43
UBE2F-201ENST00000272930 FRAS1Q86XX4 4008 aa12.37□□□□□ -0.43
UBE2F-201ENST00000272930 PSORS1C2Q9UIG4 136 aa12.34□□□□□ -0.43
UBE2F-201ENST00000272930 DNAH11Q96DT5 4516 aa12.34□□□□□ -0.43
UBE2F-201ENST00000272930 CYSTM1Q9H1C7 97 aa12.33□□□□□ -0.43
UBE2F-201ENST00000272930 DSCR10P59022 87 aa12.32□□□□□ -0.44
UBE2F-201ENST00000272930 A0A087WSZ3 146 aa12.32□□□□□ -0.44
UBE2F-201ENST00000272930 DNAH5Q8TE73 4624 aa12.32□□□□□ -0.44
UBE2F-201ENST00000272930 LINC00483Q53H64 154 aa12.3□□□□□ -0.44
UBE2F-201ENST00000272930 ZNF706Q9Y5V0 76 aaPredicted RBP12.26□□□□□ -0.45
UBE2F-201ENST00000272930 ZNF861PO60384 105 aa12.25□□□□□ -0.45
UBE2F-201ENST00000272930 C20orf197Q8N268 126 aa12.25□□□□□ -0.45
UBE2F-201ENST00000272930 HYDINQ4G0P3 5121 aa12.25□□□□□ -0.45
UBE2F-201ENST00000272930 K7EQZ3 153 aa12.25□□□□□ -0.45
UBE2F-201ENST00000272930 KRTAP10-2P60368 255 aa12.24□□□□□ -0.45
UBE2F-201ENST00000272930 FAT2Q9NYQ8 4349 aa12.22□□□□□ -0.45
UBE2F-201ENST00000272930 OCR1Q9BZK8 76 aa12.22□□□□□ -0.45
UBE2F-201ENST00000272930 PKD1P98161 4303 aa12.2□□□□□ -0.46
UBE2F-201ENST00000272930 RPL37AP61513 92 aaKnown RBP12.2□□□□□ -0.46
UBE2F-201ENST00000272930 TMEM258P61165 79 aa12.2□□□□□ -0.46
UBE2F-201ENST00000272930 KLKP1Q107X0 134 aa12.2□□□□□ -0.46
UBE2F-201ENST00000272930 IGLV9-49A0A0B4J1Y8 123 aa12.19□□□□□ -0.46
UBE2F-201ENST00000272930 DEFB116Q30KQ4 102 aa12.19□□□□□ -0.46
UBE2F-201ENST00000272930 FAM30AQ9NZY2 134 aa12.18□□□□□ -0.46
UBE2F-201ENST00000272930 LINC00472Q9H8W2 130 aa12.17□□□□□ -0.46
UBE2F-201ENST00000272930 IGLV7-43P04211 117 aa12.16□□□□□ -0.46
UBE2F-201ENST00000272930 CIRBP-AS1Q8TBR5 109 aa12.16□□□□□ -0.46
UBE2F-201ENST00000272930 Q6ZSA8 131 aa12.14□□□□□ -0.47
UBE2F-201ENST00000272930 HCG22E2RYF7 251 aa12.13□□□□□ -0.47
UBE2F-201ENST00000272930 SNURFQ9Y675 71 aa12.11□□□□□ -0.47
UBE2F-201ENST00000272930 H7BZZ5 65 aa12.11□□□□□ -0.47
UBE2F-201ENST00000272930 KRTAP10-1P60331 282 aa12.1□□□□□ -0.47
UBE2F-201ENST00000272930 MOBPQ13875 183 aa12.1□□□□□ -0.47
UBE2F-201ENST00000272930 TMEM254Q8TBM7 123 aa12.1□□□□□ -0.47
UBE2F-201ENST00000272930 ANAPC11Q9NYG5 84 aa12.1□□□□□ -0.47
UBE2F-201ENST00000272930 A8MWP4 228 aa12.08□□□□□ -0.48
UBE2F-201ENST00000272930 PRR15Q8IV56 129 aa12.07□□□□□ -0.48
UBE2F-201ENST00000272930 SACSQ9NZJ4 4579 aa12.06□□□□□ -0.48
UBE2F-201ENST00000272930 J3KT08 172 aa12.06□□□□□ -0.48
UBE2F-201ENST00000272930 LCE6AA0A183 80 aa12.05□□□□□ -0.48
UBE2F-201ENST00000272930 Q96NJ1 140 aa12.04□□□□□ -0.48
UBE2F-201ENST00000272930 NDUFC1O43677 76 aa12.04□□□□□ -0.48
UBE2F-201ENST00000272930 A0A0U1RQV1 116 aa12.03□□□□□ -0.48
UBE2F-201ENST00000272930 KRTAP29-1A8MX34 341 aaPredicted RBP12.03□□□□□ -0.48
UBE2F-201ENST00000272930 LRP1BQ9NZR2 4599 aa12.03□□□□□ -0.48
UBE2F-201ENST00000272930 HRCT1Q6UXD1 115 aa12.02□□□□□ -0.49
UBE2F-201ENST00000272930 WFDC13Q8IUB5 93 aa12.01□□□□□ -0.49
UBE2F-201ENST00000272930 RPS28P62857 69 aaKnown RBP12□□□□□ -0.49
UBE2F-201ENST00000272930 FAM236DA0A1B0GTK5 79 aa11.98□□□□□ -0.49
UBE2F-201ENST00000272930 FAM236CP0DP71 79 aa11.98□□□□□ -0.49
UBE2F-201ENST00000272930 CASC2Q6XLA1 102 aa11.96□□□□□ -0.49
UBE2F-201ENST00000272930 NDUFB1O75438 58 aa11.94□□□□□ -0.5
UBE2F-201ENST00000272930 C5orf47Q569G3 176 aa11.94□□□□□ -0.5
UBE2F-201ENST00000272930 MMP24-AS1A0A0U1RRL7 71 aa11.93□□□□□ -0.5
UBE2F-201ENST00000272930 SSBP3-AS1Q7Z2R9 100 aa11.92□□□□□ -0.5
UBE2F-201ENST00000272930 CD164Q04900 197 aa11.91□□□□□ -0.5
UBE2F-201ENST00000272930 ZCCHC13Q8WW36 166 aaKnown RBP11.89□□□□□ -0.51
UBE2F-201ENST00000272930 VPS13BQ7Z7G8 4022 aa11.89□□□□□ -0.51
UBE2F-201ENST00000272930 PKHD1P08F94 4074 aa11.86□□□□□ -0.51
UBE2F-201ENST00000272930 ATP5EP56381 51 aaPredicted RBP11.86□□□□□ -0.51
UBE2F-201ENST00000272930 ASB16-AS1Q495Z4 193 aa11.86□□□□□ -0.51
UBE2F-201ENST00000272930 hDV103S1A0JD37 113 aa11.85□□□□□ -0.51
UBE2F-201ENST00000272930 OXTP01178 125 aa11.85□□□□□ -0.51
UBE2F-201ENST00000272930 FAM229BQ4G0N7 80 aa11.85□□□□□ -0.51
UBE2F-201ENST00000272930 A0A087X002 238 aa11.84□□□□□ -0.51
UBE2F-201ENST00000272930 A0A1B0GVX0 72 aa11.84□□□□□ -0.51
UBE2F-201ENST00000272930 LINC00336Q6ZUF6 198 aa11.84□□□□□ -0.51
UBE2F-201ENST00000272930 C8orf17Q9NRJ1 99 aa11.83□□□□□ -0.52
UBE2F-201ENST00000272930 KRTAP13-2Q52LG2 175 aa11.82□□□□□ -0.52
UBE2F-201ENST00000272930 SERP1Q9Y6X1 66 aa11.81□□□□□ -0.52
UBE2F-201ENST00000272930 CDK2AP2O75956 126 aa11.81□□□□□ -0.52
UBE2F-201ENST00000272930 MP68P56378 58 aa11.81□□□□□ -0.52
UBE2F-201ENST00000272930 KRTAP1-4P0C5Y4 121 aa11.8□□□□□ -0.52
UBE2F-201ENST00000272930 IGHV6-1A0A0B4J1U7 121 aa11.79□□□□□ -0.52
UBE2F-201ENST00000272930 DYNC1H1Q14204 4646 aaKnown RBP11.76□□□□□ -0.53
UBE2F-201ENST00000272930 H0Y9P7 68 aa11.76□□□□□ -0.53
UBE2F-201ENST00000272930 H3BPC8 53 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms