RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 H3BPC8 53 aa8.7□□□□□ -1.02
NPC1-201ENST00000269228 ACYP2P14621 99 aa8.7□□□□□ -1.02
NPC1-201ENST00000269228 UTP20O75691 2785 aaKnown RBP8.7□□□□□ -1.02
NPC1-201ENST00000269228 C9orf92A6NGG3 77 aa8.7□□□□□ -1.02
NPC1-201ENST00000269228 OBSCN-AS1Q96MR7 158 aa8.69□□□□□ -1.02
NPC1-201ENST00000269228 PRR15Q8IV56 129 aa8.69□□□□□ -1.02
NPC1-201ENST00000269228 C8orf17Q9NRJ1 99 aa8.69□□□□□ -1.02
NPC1-201ENST00000269228 KALRNO60229 2985 aa8.68□□□□□ -1.02
NPC1-201ENST00000269228 REV3LO60673 3130 aa8.68□□□□□ -1.02
NPC1-201ENST00000269228 LRBAP50851 2863 aa8.67□□□□□ -1.02
NPC1-201ENST00000269228 NBEAQ8NFP9 2946 aa8.67□□□□□ -1.02
NPC1-201ENST00000269228 HIVEP1P15822 2718 aa8.67□□□□□ -1.02
NPC1-201ENST00000269228 A0A1B0GVX0 72 aa8.67□□□□□ -1.02
NPC1-201ENST00000269228 A0A1W2PNM2 257 aa8.67□□□□□ -1.02
NPC1-201ENST00000269228 A8MUN3 132 aa8.67□□□□□ -1.02
NPC1-201ENST00000269228 SPTBN5Q9NRC6 3674 aaKnown RBP8.66□□□□□ -1.02
NPC1-201ENST00000269228 LOC101927531A0A1B0GV80 90 aa8.66□□□□□ -1.02
NPC1-201ENST00000269228 ZZEF1O43149 2961 aa8.65□□□□□ -1.02
NPC1-201ENST00000269228 EYSQ5T1H1 3165 aa8.65□□□□□ -1.02
NPC1-201ENST00000269228 DMXL1Q9Y485 3027 aa8.64□□□□□ -1.03
NPC1-201ENST00000269228 KRTAP1-5Q9BYS1 174 aa8.64□□□□□ -1.03
NPC1-201ENST00000269228 A0A1B0GU69 56 aa8.63□□□□□ -1.03
NPC1-201ENST00000269228 H7BZZ5 65 aa8.63□□□□□ -1.03
NPC1-201ENST00000269228 CD164Q04900 197 aa8.61□□□□□ -1.03
NPC1-201ENST00000269228 IGLV5-48A0A075B6I7 105 aa8.6□□□□□ -1.03
NPC1-201ENST00000269228 KLKP1Q107X0 134 aa8.6□□□□□ -1.03
NPC1-201ENST00000269228 APCP25054 2843 aa8.59□□□□□ -1.03
NPC1-201ENST00000269228 Q8NDZ9 215 aa8.57□□□□□ -1.04
NPC1-201ENST00000269228 COX6B2Q6YFQ2 88 aa8.57□□□□□ -1.04
NPC1-201ENST00000269228 CYP4F30PQ9H0H9 118 aa8.57□□□□□ -1.04
NPC1-201ENST00000269228 PRR26Q8N8Z3 221 aa8.56□□□□□ -1.04
NPC1-201ENST00000269228 PLAC8Q9NZF1 115 aa8.56□□□□□ -1.04
NPC1-201ENST00000269228 STAB2Q8WWQ8 2551 aa8.55□□□□□ -1.04
NPC1-201ENST00000269228 SPINT4Q6UDR6 99 aa8.54□□□□□ -1.04
NPC1-201ENST00000269228 SPEGQ15772 3267 aa8.54□□□□□ -1.04
NPC1-201ENST00000269228 KRTAP26-1Q6PEX3 210 aa8.52□□□□□ -1.05
NPC1-201ENST00000269228 IGLV8-61A0A075B6I0 122 aa8.5□□□□□ -1.05
NPC1-201ENST00000269228 USP34Q70CQ2 3546 aa8.5□□□□□ -1.05
NPC1-201ENST00000269228 LCE6AA0A183 80 aa8.49□□□□□ -1.05
NPC1-201ENST00000269228 ZANQ9Y493 2812 aa8.49□□□□□ -1.05
NPC1-201ENST00000269228 SPRR1AP35321 89 aa8.47□□□□□ -1.05
NPC1-201ENST00000269228 CFAP47Q6ZTR5 3102 aa8.47□□□□□ -1.05
NPC1-201ENST00000269228 KMT2BQ9UMN6 2715 aaPredicted RBP8.46□□□□□ -1.05
NPC1-201ENST00000269228 COA5Q86WW8 74 aa8.46□□□□□ -1.06
NPC1-201ENST00000269228 TENM4Q6N022 2769 aa8.46□□□□□ -1.06
NPC1-201ENST00000269228 KRTAP10-2P60368 255 aa8.45□□□□□ -1.06
NPC1-201ENST00000269228 FAM229BQ4G0N7 80 aa8.44□□□□□ -1.06
NPC1-201ENST00000269228 CYSTM1Q9H1C7 97 aa8.44□□□□□ -1.06
NPC1-201ENST00000269228 CRYBG3Q68DQ2 2970 aa8.43□□□□□ -1.06
NPC1-201ENST00000269228 LCA10Q71F78 164 aa8.43□□□□□ -1.06
NPC1-201ENST00000269228 KTN1-AS1Q86SY8 53 aa8.43□□□□□ -1.06
NPC1-201ENST00000269228 KRTAP10-1P60331 282 aa8.43□□□□□ -1.06
NPC1-201ENST00000269228 CELSR2Q9HCU4 2923 aa8.42□□□□□ -1.06
NPC1-201ENST00000269228 IGLV7-46A0A075B6I9 117 aa8.42□□□□□ -1.06
NPC1-201ENST00000269228 Q5XG85 94 aa8.42□□□□□ -1.06
NPC1-201ENST00000269228 NIPBLQ6KC79 2804 aaeCLIP8.41□□□□□ -1.06
NPC1-201ENST00000269228 ASH1LQ9NR48 2969 aaKnown RBP8.41□□□□□ -1.06
NPC1-201ENST00000269228 LINC01600Q96MT4 127 aa8.4□□□□□ -1.07
NPC1-201ENST00000269228 LOC400499M0QZD8 3231 aa8.39□□□□□ -1.07
NPC1-201ENST00000269228 RBM12B-AS1Q9P1G2 102 aa8.37□□□□□ -1.07
NPC1-201ENST00000269228 UQCR11O14957 56 aa8.37□□□□□ -1.07
NPC1-201ENST00000269228 Q6ZR54 194 aa8.37□□□□□ -1.07
NPC1-201ENST00000269228 Q8N1X5 172 aa8.37□□□□□ -1.07
NPC1-201ENST00000269228 PANO1I0J062 215 aa8.34□□□□□ -1.07
NPC1-201ENST00000269228 SPRR1BP22528 89 aa8.34□□□□□ -1.07
NPC1-201ENST00000269228 Q5VSD8 79 aa8.34□□□□□ -1.07
NPC1-201ENST00000269228 HRNRQ86YZ3 2850 aaPredicted RBP8.33□□□□□ -1.08
NPC1-201ENST00000269228 Q6ZSA8 131 aa8.32□□□□□ -1.08
NPC1-201ENST00000269228 DCHS2Q6V1P9 2916 aa8.32□□□□□ -1.08
NPC1-201ENST00000269228 CRIPTQ9P021 101 aa8.32□□□□□ -1.08
NPC1-201ENST00000269228 FP248Q71RG6 208 aaPredicted RBP8.31□□□□□ -1.08
NPC1-201ENST00000269228 OCR1Q9BZK8 76 aa8.29□□□□□ -1.08
NPC1-201ENST00000269228 OXTP01178 125 aa8.28□□□□□ -1.08
NPC1-201ENST00000269228 MIR22HGQ0VDD5 57 aa8.25□□□□□ -1.09
NPC1-201ENST00000269228 MMP24-AS1A0A0U1RRL7 71 aa8.25□□□□□ -1.09
NPC1-201ENST00000269228 NF1P21359 2839 aa8.25□□□□□ -1.09
NPC1-201ENST00000269228 Q1T7F1 81 aa8.24□□□□□ -1.09
NPC1-201ENST00000269228 SPANXA2-OT1Q8N9U9 137 aa8.23□□□□□ -1.09
NPC1-201ENST00000269228 LINC00472Q9H8W2 130 aa8.23□□□□□ -1.09
NPC1-201ENST00000269228 MYO15AQ9UKN7 3530 aa8.23□□□□□ -1.09
NPC1-201ENST00000269228 CDC42SE1Q9NRR8 79 aa8.22□□□□□ -1.09
NPC1-201ENST00000269228 DMBT1Q9UGM3 2413 aaPredicted RBP8.21□□□□□ -1.1
NPC1-201ENST00000269228 FBN2P35556 2912 aa8.21□□□□□ -1.1
NPC1-201ENST00000269228 Q6ZRN7 208 aaPredicted RBP8.2□□□□□ -1.1
NPC1-201ENST00000269228 KRTAP4-16G5E9R7 235 aaPredicted RBP8.2□□□□□ -1.1
NPC1-201ENST00000269228 KRTAP21-3Q3LHN1 58 aa8.2□□□□□ -1.1
NPC1-201ENST00000269228 ZCCHC13Q8WW36 166 aaKnown RBP8.19□□□□□ -1.1
NPC1-201ENST00000269228 HRES1P13985 223 aa8.18□□□□□ -1.1
NPC1-201ENST00000269228 LINC01554Q52M75 96 aa8.17□□□□□ -1.1
NPC1-201ENST00000269228 LINC00483Q53H64 154 aa8.16□□□□□ -1.1
NPC1-201ENST00000269228 Q8N9P0 234 aaPredicted RBP8.15□□□□□ -1.1
NPC1-201ENST00000269228 FLG2Q5D862 2391 aaPredicted RBP8.15□□□□□ -1.11
NPC1-201ENST00000269228 LUZP6Q538Z0 58 aa8.15□□□□□ -1.11
NPC1-201ENST00000269228 H3BS24 57 aa8.13□□□□□ -1.11
NPC1-201ENST00000269228 A0A087X002 238 aa8.12□□□□□ -1.11
NPC1-201ENST00000269228 KRTAP11-1Q8IUC1 163 aa8.12□□□□□ -1.11
NPC1-201ENST00000269228 PRAC1Q96KF2 57 aa8.11□□□□□ -1.11
NPC1-201ENST00000269228 A0A0D9SG42 100 aa8.11□□□□□ -1.11
NPC1-201ENST00000269228 M0R2T5 61 aa8.1□□□□□ -1.11
NPC1-201ENST00000269228 Q5W150 140 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms