RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 CASC10Q5T4H9 136 aa11.19□□□□□ -0.62
SRF-201ENST00000265354 IGLV8-61A0A075B6I0 122 aa11.18□□□□□ -0.62
SRF-201ENST00000265354 C8orf87E5RJ46 101 aa11.18□□□□□ -0.62
SRF-201ENST00000265354 SPINK1P00995 79 aa11.16□□□□□ -0.62
SRF-201ENST00000265354 LOC101927531A0A1B0GV80 90 aa11.15□□□□□ -0.62
SRF-201ENST00000265354 KCNQ1DNQ9H478 68 aa11.15□□□□□ -0.62
SRF-201ENST00000265354 STAB2Q8WWQ8 2551 aa11.15□□□□□ -0.62
SRF-201ENST00000265354 PHF5AQ7RTV0 110 aaKnown RBP11.15□□□□□ -0.62
SRF-201ENST00000265354 COA5Q86WW8 74 aa11.15□□□□□ -0.62
SRF-201ENST00000265354 C14orf177Q52M58 125 aa11.15□□□□□ -0.62
SRF-201ENST00000265354 ZNF706Q9Y5V0 76 aaPredicted RBP11.14□□□□□ -0.63
SRF-201ENST00000265354 LY6G6CO95867 125 aa11.13□□□□□ -0.63
SRF-201ENST00000265354 LINC00588Q9Y4M8 146 aa11.13□□□□□ -0.63
SRF-201ENST00000265354 PRAC1Q96KF2 57 aa11.13□□□□□ -0.63
SRF-201ENST00000265354 OCR1Q9BZK8 76 aa11.13□□□□□ -0.63
SRF-201ENST00000265354 CYP4F30PQ9H0H9 118 aa11.12□□□□□ -0.63
SRF-201ENST00000265354 IGLV1-50A0A075B6I6 118 aa11.11□□□□□ -0.63
SRF-201ENST00000265354 K7ERS5 55 aa11.1□□□□□ -0.63
SRF-201ENST00000265354 PDZD2O15018 2839 aa11.09□□□□□ -0.63
SRF-201ENST00000265354 A0A1B0GU69 56 aa11.09□□□□□ -0.63
SRF-201ENST00000265354 EPM2AB3EWF7 344 aa11.09□□□□□ -0.63
SRF-201ENST00000265354 IGFL1Q6UW32 110 aa11.09□□□□□ -0.63
SRF-201ENST00000265354 DMBT1Q9UGM3 2413 aaPredicted RBP11.08□□□□□ -0.64
SRF-201ENST00000265354 KRTAP1-1Q07627 177 aa11.07□□□□□ -0.64
SRF-201ENST00000265354 Q1T7F1 81 aa11.07□□□□□ -0.64
SRF-201ENST00000265354 CIRBP-AS1Q8TBR5 109 aa11.05□□□□□ -0.64
SRF-201ENST00000265354 C16orf90A8MZG2 172 aa11.02□□□□□ -0.65
SRF-201ENST00000265354 VWFP04275 2813 aa11.02□□□□□ -0.65
SRF-201ENST00000265354 KRTAP10-11P60412 298 aa11.01□□□□□ -0.65
SRF-201ENST00000265354 DSCR10P59022 87 aa11.01□□□□□ -0.65
SRF-201ENST00000265354 H3BNG1 76 aa10.99□□□□□ -0.65
SRF-201ENST00000265354 IGLV5-48A0A075B6I7 105 aa10.99□□□□□ -0.65
SRF-201ENST00000265354 KRTAP24-1Q3LI83 254 aa10.99□□□□□ -0.65
SRF-201ENST00000265354 KMT2BQ9UMN6 2715 aaPredicted RBP10.98□□□□□ -0.65
SRF-201ENST00000265354 DNAH10OSP0CZ25 163 aa10.97□□□□□ -0.65
SRF-201ENST00000265354 MOBPQ13875 183 aa10.97□□□□□ -0.65
SRF-201ENST00000265354 CDC42SE1Q9NRR8 79 aa10.96□□□□□ -0.65
SRF-201ENST00000265354 A0A1B0GW54 56 aa10.95□□□□□ -0.66
SRF-201ENST00000265354 ANAPC11Q9NYG5 84 aa10.94□□□□□ -0.66
SRF-201ENST00000265354 BSNQ9UPA5 3926 aa10.94□□□□□ -0.66
SRF-201ENST00000265354 LINC01554Q52M75 96 aa10.93□□□□□ -0.66
SRF-201ENST00000265354 Q5VV11 94 aa10.93□□□□□ -0.66
SRF-201ENST00000265354 A8MU10 97 aa10.92□□□□□ -0.66
SRF-201ENST00000265354 FBN1P35555 2871 aaKnown RBP10.91□□□□□ -0.66
SRF-201ENST00000265354 TENM1Q9UKZ4 2725 aa10.9□□□□□ -0.67
SRF-201ENST00000265354 A8MWP4 228 aa10.89□□□□□ -0.67
SRF-201ENST00000265354 Q8N9P0 234 aaPredicted RBP10.89□□□□□ -0.67
SRF-201ENST00000265354 FLG2Q5D862 2391 aaPredicted RBP10.88□□□□□ -0.67
SRF-201ENST00000265354 VPS13CQ709C8 3753 aa10.87□□□□□ -0.67
SRF-201ENST00000265354 H3BPC8 53 aa10.87□□□□□ -0.67
SRF-201ENST00000265354 PRR26Q8N8Z3 221 aa10.87□□□□□ -0.67
SRF-201ENST00000265354 ZFHX3Q15911 3703 aa10.86□□□□□ -0.67
SRF-201ENST00000265354 LINC00313P59037 77 aa10.86□□□□□ -0.67
SRF-201ENST00000265354 SPINT4Q6UDR6 99 aa10.86□□□□□ -0.67
SRF-201ENST00000265354 TENM3Q9P273 2699 aa10.86□□□□□ -0.67
SRF-201ENST00000265354 ACYP2P14621 99 aa10.85□□□□□ -0.67
SRF-201ENST00000265354 PKD1L1Q8TDX9 2849 aa10.84□□□□□ -0.67
SRF-201ENST00000265354 IGKV2D-30A0A075B6S6 120 aa10.83□□□□□ -0.68
SRF-201ENST00000265354 IGKV2-30P06310 120 aa10.83□□□□□ -0.68
SRF-201ENST00000265354 SSBP3-AS1Q7Z2R9 100 aa10.83□□□□□ -0.68
SRF-201ENST00000265354 NUPR2A6NF83 97 aa10.82□□□□□ -0.68
SRF-201ENST00000265354 IGLV5-52A0A0A0MRZ9 124 aa10.81□□□□□ -0.68
SRF-201ENST00000265354 SPRR4Q96PI1 79 aa10.8□□□□□ -0.68
SRF-201ENST00000265354 MIR22HGQ0VDD5 57 aa10.8□□□□□ -0.68
SRF-201ENST00000265354 UQCR11O14957 56 aa10.79□□□□□ -0.68
SRF-201ENST00000265354 TLX1NBP0CAT3 122 aa10.79□□□□□ -0.68
SRF-201ENST00000265354 KRTAP26-1Q6PEX3 210 aa10.77□□□□□ -0.69
SRF-201ENST00000265354 TP53AIP1Q9HCN2 124 aa10.76□□□□□ -0.69
SRF-201ENST00000265354 SPINK7P58062 85 aa10.76□□□□□ -0.69
SRF-201ENST00000265354 Q75L30 129 aa10.74□□□□□ -0.69
SRF-201ENST00000265354 PLA2G2DQ9UNK4 145 aa10.73□□□□□ -0.69
SRF-201ENST00000265354 NBPF19A0A087WUL8 3843 aa10.72□□□□□ -0.69
SRF-201ENST00000265354 TENM4Q6N022 2769 aa10.72□□□□□ -0.69
SRF-201ENST00000265354 C8orf17Q9NRJ1 99 aa10.72□□□□□ -0.69
SRF-201ENST00000265354 C1orf134Q5TEV5 83 aa10.72□□□□□ -0.69
SRF-201ENST00000265354 MRPL34Q9BQ48 92 aaKnown RBP10.7□□□□□ -0.7
SRF-201ENST00000265354 CNBPP62633 177 aaKnown RBP10.69□□□□□ -0.7
SRF-201ENST00000265354 SPANXA2-OT1Q8N9U9 137 aa10.69□□□□□ -0.7
SRF-201ENST00000265354 K7EIL1 84 aa10.69□□□□□ -0.7
SRF-201ENST00000265354 SPACA4Q8TDM5 124 aa10.69□□□□□ -0.7
SRF-201ENST00000265354 CSAG1Q6PB30 78 aa10.68□□□□□ -0.7
SRF-201ENST00000265354 SPRR1AP35321 89 aa10.67□□□□□ -0.7
SRF-201ENST00000265354 NBDYA0A0U1RRE5 68 aa10.66□□□□□ -0.7
SRF-201ENST00000265354 C9orf163Q8N9P6 203 aa10.64□□□□□ -0.71
SRF-201ENST00000265354 OTOGQ6ZRI0 2925 aa10.63□□□□□ -0.71
SRF-201ENST00000265354 IGLV5-37A0A075B6J1 123 aa10.63□□□□□ -0.71
SRF-201ENST00000265354 TNP2Q05952 138 aa10.62□□□□□ -0.71
SRF-201ENST00000265354 A0A1B0GVX0 72 aa10.62□□□□□ -0.71
SRF-201ENST00000265354 RTL8CO15255 209 aa10.59□□□□□ -0.71
SRF-201ENST00000265354 KRTAP1-5Q9BYS1 174 aa10.59□□□□□ -0.71
SRF-201ENST00000265354 KRTAP4-16G5E9R7 235 aaPredicted RBP10.58□□□□□ -0.72
SRF-201ENST00000265354 TENM2Q9NT68 2774 aa10.58□□□□□ -0.72
SRF-201ENST00000265354 ADM2Q7Z4H4 148 aa10.58□□□□□ -0.72
SRF-201ENST00000265354 CRIPTQ9P021 101 aa10.56□□□□□ -0.72
SRF-201ENST00000265354 PSORS1C2Q9UIG4 136 aa10.56□□□□□ -0.72
SRF-201ENST00000265354 MMP24-AS1A0A0U1RRL7 71 aa10.54□□□□□ -0.72
SRF-201ENST00000265354 LINC01558Q9Y6Z2 57 aa10.54□□□□□ -0.72
SRF-201ENST00000265354 KRTAP7-1Q8IUC3 87 aa10.54□□□□□ -0.72
SRF-201ENST00000265354 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.54□□□□□ -0.72
SRF-201ENST00000265354 IGLV7-46A0A075B6I9 117 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms