RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 LINC00336Q6ZUF6 198 aa5.78□□□□□ -1.48
SSR3-201ENST00000265044 FAM30AQ9NZY2 134 aa5.78□□□□□ -1.48
SSR3-201ENST00000265044 NDUFB1O75438 58 aa5.77□□□□□ -1.49
SSR3-201ENST00000265044 ATOX1O00244 68 aa5.77□□□□□ -1.49
SSR3-201ENST00000265044 IGLV5-48A0A075B6I7 105 aa5.76□□□□□ -1.49
SSR3-201ENST00000265044 Q6Q795 121 aa5.76□□□□□ -1.49
SSR3-201ENST00000265044 IGFL1Q6UW32 110 aa5.76□□□□□ -1.49
SSR3-201ENST00000265044 PRKDCP78527 4128 aaKnown RBP5.76□□□□□ -1.49
SSR3-201ENST00000265044 IGLV7-43P04211 117 aa5.76□□□□□ -1.49
SSR3-201ENST00000265044 KRTAP10-1P60331 282 aa5.76□□□□□ -1.49
SSR3-201ENST00000265044 TRBV7-7A0A0K0K1E9 115 aa5.75□□□□□ -1.49
SSR3-201ENST00000265044 A0A1W2PNM2 257 aa5.74□□□□□ -1.49
SSR3-201ENST00000265044 DNAH3Q8TD57 4116 aa5.74□□□□□ -1.49
SSR3-201ENST00000265044 SPRR4Q96PI1 79 aa5.74□□□□□ -1.49
SSR3-201ENST00000265044 SS18L2Q9UHA2 77 aa5.74□□□□□ -1.49
SSR3-201ENST00000265044 WFDC13Q8IUB5 93 aa5.73□□□□□ -1.49
SSR3-201ENST00000265044 NDUFS5O43920 106 aa5.72□□□□□ -1.49
SSR3-201ENST00000265044 CXCL6P80162 114 aa5.71□□□□□ -1.49
SSR3-201ENST00000265044 RPL37AP61513 92 aaKnown RBP5.71□□□□□ -1.5
SSR3-201ENST00000265044 IGKV4-1P06312 121 aa5.71□□□□□ -1.5
SSR3-201ENST00000265044 SMIM29Q86T20 159 aa5.7□□□□□ -1.5
SSR3-201ENST00000265044 PLECQ15149 4684 aaKnown RBP5.7□□□□□ -1.5
SSR3-201ENST00000265044 A0A1B0GW54 56 aa5.7□□□□□ -1.5
SSR3-201ENST00000265044 PLA2G1BP04054 148 aaKnown RBP5.7□□□□□ -1.5
SSR3-201ENST00000265044 CRYGAP11844 174 aa5.7□□□□□ -1.5
SSR3-201ENST00000265044 SRRM2Q9UQ35 2752 aaKnown RBP5.67□□□□□ -1.5
SSR3-201ENST00000265044 C20orf197Q8N268 126 aa5.67□□□□□ -1.5
SSR3-201ENST00000265044 CCDC179H3BU77 68 aa5.66□□□□□ -1.5
SSR3-201ENST00000265044 SERP2Q8N6R1 65 aa5.66□□□□□ -1.5
SSR3-201ENST00000265044 IGHV6-1A0A0B4J1U7 121 aa5.66□□□□□ -1.5
SSR3-201ENST00000265044 UQCRQO14949 82 aa5.65□□□□□ -1.5
SSR3-201ENST00000265044 FAM229AH3BQW9 127 aa5.65□□□□□ -1.5
SSR3-201ENST00000265044 TYMSOSQ8TAI1 123 aa5.65□□□□□ -1.5
SSR3-201ENST00000265044 SMIM20Q8N5G0 67 aa5.65□□□□□ -1.51
SSR3-201ENST00000265044 STARD9Q9P2P6 4700 aa5.65□□□□□ -1.51
SSR3-201ENST00000265044 K7EQZ3 153 aa5.64□□□□□ -1.51
SSR3-201ENST00000265044 SPRR1BP22528 89 aa5.64□□□□□ -1.51
SSR3-201ENST00000265044 COX7CP15954 63 aa5.64□□□□□ -1.51
SSR3-201ENST00000265044 J3KT08 172 aa5.62□□□□□ -1.51
SSR3-201ENST00000265044 SSBP3-AS1Q7Z2R9 100 aa5.62□□□□□ -1.51
SSR3-201ENST00000265044 LYSTQ99698 3801 aa5.62□□□□□ -1.51
SSR3-201ENST00000265044 DNAH10Q8IVF4 4471 aa5.62□□□□□ -1.51
SSR3-201ENST00000265044 HCG22E2RYF7 251 aa5.62□□□□□ -1.51
SSR3-201ENST00000265044 CASC2Q6XLA1 102 aa5.62□□□□□ -1.51
SSR3-201ENST00000265044 DMBT1Q9UGM3 2413 aaPredicted RBP5.62□□□□□ -1.51
SSR3-201ENST00000265044 FLG2Q5D862 2391 aaPredicted RBP5.61□□□□□ -1.51
SSR3-201ENST00000265044 KRTAP13-1Q8IUC0 172 aa5.61□□□□□ -1.51
SSR3-201ENST00000265044 SNURFQ9Y675 71 aa5.61□□□□□ -1.51
SSR3-201ENST00000265044 IGLV8-61A0A075B6I0 122 aa5.6□□□□□ -1.51
SSR3-201ENST00000265044 MP68P56378 58 aa5.6□□□□□ -1.51
SSR3-201ENST00000265044 TRAV7A0A075B6U4 112 aa5.6□□□□□ -1.51
SSR3-201ENST00000265044 LIMD2Q9BT23 127 aa5.58□□□□□ -1.52
SSR3-201ENST00000265044 A8MWP4 228 aa5.57□□□□□ -1.52
SSR3-201ENST00000265044 Q6ZSA8 131 aa5.57□□□□□ -1.52
SSR3-201ENST00000265044 DSCR10P59022 87 aa5.57□□□□□ -1.52
SSR3-201ENST00000265044 PRR26Q8N8Z3 221 aa5.57□□□□□ -1.52
SSR3-201ENST00000265044 LINC00483Q53H64 154 aa5.57□□□□□ -1.52
SSR3-201ENST00000265044 PRR15Q8IV56 129 aa5.56□□□□□ -1.52
SSR3-201ENST00000265044 hDV103S1A0JD37 113 aa5.55□□□□□ -1.52
SSR3-201ENST00000265044 A0A087X002 238 aa5.55□□□□□ -1.52
SSR3-201ENST00000265044 KMT2AQ03164 3969 aa5.55□□□□□ -1.52
SSR3-201ENST00000265044 LINC00304Q8N9R0 145 aa5.54□□□□□ -1.52
SSR3-201ENST00000265044 DNAH1Q9P2D7 4330 aa5.53□□□□□ -1.52
SSR3-201ENST00000265044 LINC00208Q96KT6 92 aa5.53□□□□□ -1.52
SSR3-201ENST00000265044 DNAH7Q8WXX0 4024 aa5.53□□□□□ -1.52
SSR3-201ENST00000265044 FAM229BQ4G0N7 80 aa5.52□□□□□ -1.53
SSR3-201ENST00000265044 TMEM254Q8TBM7 123 aa5.52□□□□□ -1.53
SSR3-201ENST00000265044 VPS13DQ5THJ4 4388 aa5.52□□□□□ -1.53
SSR3-201ENST00000265044 RETNLBQ9BQ08 111 aa5.51□□□□□ -1.53
SSR3-201ENST00000265044 LINC00472Q9H8W2 130 aa5.51□□□□□ -1.53
SSR3-201ENST00000265044 A0A1B0GVX0 72 aa5.5□□□□□ -1.53
SSR3-201ENST00000265044 LINC00313P59037 77 aa5.49□□□□□ -1.53
SSR3-201ENST00000265044 PRR4Q16378 134 aa5.49□□□□□ -1.53
SSR3-201ENST00000265044 C8orf17Q9NRJ1 99 aa5.49□□□□□ -1.53
SSR3-201ENST00000265044 H0Y9P7 68 aa5.49□□□□□ -1.53
SSR3-201ENST00000265044 CD164Q04900 197 aa5.49□□□□□ -1.53
SSR3-201ENST00000265044 SPINK1P00995 79 aa5.48□□□□□ -1.53
SSR3-201ENST00000265044 C5orf47Q569G3 176 aa5.48□□□□□ -1.53
SSR3-201ENST00000265044 Q5VSD8 79 aa5.48□□□□□ -1.53
SSR3-201ENST00000265044 SPAG11AQ6PDA7 123 aa5.47□□□□□ -1.53
SSR3-201ENST00000265044 KRTAP13-2Q52LG2 175 aa5.47□□□□□ -1.53
SSR3-201ENST00000265044 MRPL34Q9BQ48 92 aaKnown RBP5.46□□□□□ -1.54
SSR3-201ENST00000265044 FAM236DA0A1B0GTK5 79 aa5.45□□□□□ -1.54
SSR3-201ENST00000265044 NDUFC1O43677 76 aa5.45□□□□□ -1.54
SSR3-201ENST00000265044 FAM236CP0DP71 79 aa5.45□□□□□ -1.54
SSR3-201ENST00000265044 A0A1B0GVY2 172 aa5.45□□□□□ -1.54
SSR3-201ENST00000265044 TMEM258P61165 79 aa5.45□□□□□ -1.54
SSR3-201ENST00000265044 PCOTHQ58A44 107 aa5.44□□□□□ -1.54
SSR3-201ENST00000265044 C1orf64Q8NEQ6 169 aa5.44□□□□□ -1.54
SSR3-201ENST00000265044 Q96NJ1 140 aa5.44□□□□□ -1.54
SSR3-201ENST00000265044 TRAV22A0A0B4J277 110 aa5.43□□□□□ -1.54
SSR3-201ENST00000265044 OCR1Q9BZK8 76 aa5.43□□□□□ -1.54
SSR3-201ENST00000265044 TP53AIP1Q9HCN2 124 aa5.43□□□□□ -1.54
SSR3-201ENST00000265044 C8orf87E5RJ46 101 aa5.42□□□□□ -1.54
SSR3-201ENST00000265044 DNAH11Q96DT5 4516 aa5.42□□□□□ -1.54
SSR3-201ENST00000265044 MMP24-AS1A0A0U1RRL7 71 aa5.41□□□□□ -1.54
SSR3-201ENST00000265044 C9orf92A6NGG3 77 aa5.41□□□□□ -1.54
SSR3-201ENST00000265044 C1orf195Q5TG92 126 aa5.41□□□□□ -1.54
SSR3-201ENST00000265044 DYNC2H1Q8NCM8 4307 aaKnown RBP5.41□□□□□ -1.54
SSR3-201ENST00000265044 KRTAP1-4P0C5Y4 121 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms