RNA–Protein interactions for RNA: ENST00000262965.9

TCF3-201, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-201ENST00000262965 ANAPC11Q9NYG5 84 aa8.83□□□□□ -1
TCF3-201ENST00000262965 MRPL34Q9BQ48 92 aaKnown RBP8.82□□□□□ -1
TCF3-201ENST00000262965 STAB2Q8WWQ8 2551 aa8.81□□□□□ -1
TCF3-201ENST00000262965 ZZEF1O43149 2961 aa8.8□□□□□ -1
TCF3-201ENST00000262965 CYSTM1Q9H1C7 97 aa8.78□□□□□ -1
TCF3-201ENST00000262965 LINC01600Q96MT4 127 aa8.77□□□□□ -1.01
TCF3-201ENST00000262965 C8orf17Q9NRJ1 99 aa8.77□□□□□ -1.01
TCF3-201ENST00000262965 LOC101927531A0A1B0GV80 90 aa8.77□□□□□ -1.01
TCF3-201ENST00000262965 DCHS1Q96JQ0 3298 aa8.76□□□□□ -1.01
TCF3-201ENST00000262965 K7EIL1 84 aa8.75□□□□□ -1.01
TCF3-201ENST00000262965 TYMSOSQ8TAI1 123 aa8.75□□□□□ -1.01
TCF3-201ENST00000262965 Q96NJ1 140 aa8.75□□□□□ -1.01
TCF3-201ENST00000262965 DSCR10P59022 87 aa8.74□□□□□ -1.01
TCF3-201ENST00000262965 C8orf87E5RJ46 101 aa8.72□□□□□ -1.01
TCF3-201ENST00000262965 FAM229AH3BQW9 127 aa8.72□□□□□ -1.01
TCF3-201ENST00000262965 Q8NDZ9 215 aa8.72□□□□□ -1.01
TCF3-201ENST00000262965 LRBAP50851 2863 aa8.72□□□□□ -1.01
TCF3-201ENST00000262965 CYP4F30PQ9H0H9 118 aa8.72□□□□□ -1.01
TCF3-201ENST00000262965 OCR1Q9BZK8 76 aa8.71□□□□□ -1.02
TCF3-201ENST00000262965 IGLV5-48A0A075B6I7 105 aa8.7□□□□□ -1.02
TCF3-201ENST00000262965 TLX1NBP0CAT3 122 aa8.7□□□□□ -1.02
TCF3-201ENST00000262965 A0A1B0GVX0 72 aa8.7□□□□□ -1.02
TCF3-201ENST00000262965 C9orf163Q8N9P6 203 aa8.7□□□□□ -1.02
TCF3-201ENST00000262965 ZFHX4Q86UP3 3567 aa8.69□□□□□ -1.02
TCF3-201ENST00000262965 DMBT1Q9UGM3 2413 aaPredicted RBP8.68□□□□□ -1.02
TCF3-201ENST00000262965 PLA2G1BP04054 148 aaKnown RBP8.68□□□□□ -1.02
TCF3-201ENST00000262965 UTP20O75691 2785 aaKnown RBP8.67□□□□□ -1.02
TCF3-201ENST00000262965 UQCR11O14957 56 aa8.66□□□□□ -1.02
TCF3-201ENST00000262965 ZNF861PO60384 105 aa8.66□□□□□ -1.02
TCF3-201ENST00000262965 PLA2G2DQ9UNK4 145 aa8.66□□□□□ -1.02
TCF3-201ENST00000262965 CELSR2Q9HCU4 2923 aa8.65□□□□□ -1.02
TCF3-201ENST00000262965 PRR26Q8N8Z3 221 aa8.64□□□□□ -1.03
TCF3-201ENST00000262965 PSORS1C2Q9UIG4 136 aa8.63□□□□□ -1.03
TCF3-201ENST00000262965 A0A087WTM6 91 aa8.61□□□□□ -1.03
TCF3-201ENST00000262965 HIVEP1P15822 2718 aa8.6□□□□□ -1.03
TCF3-201ENST00000262965 MIR22HGQ0VDD5 57 aa8.6□□□□□ -1.03
TCF3-201ENST00000262965 RELNP78509 3460 aa8.6□□□□□ -1.03
TCF3-201ENST00000262965 SSBP3-AS1Q7Z2R9 100 aa8.59□□□□□ -1.03
TCF3-201ENST00000262965 SPRR4Q96PI1 79 aa8.59□□□□□ -1.03
TCF3-201ENST00000262965 FAM229BQ4G0N7 80 aa8.58□□□□□ -1.04
TCF3-201ENST00000262965 ZANQ9Y493 2812 aa8.57□□□□□ -1.04
TCF3-201ENST00000262965 Q5XG85 94 aa8.57□□□□□ -1.04
TCF3-201ENST00000262965 FP248Q71RG6 208 aaPredicted RBP8.56□□□□□ -1.04
TCF3-201ENST00000262965 C9orf92A6NGG3 77 aa8.56□□□□□ -1.04
TCF3-201ENST00000262965 CNBPP62633 177 aaKnown RBP8.55□□□□□ -1.04
TCF3-201ENST00000262965 CD164Q04900 197 aa8.55□□□□□ -1.04
TCF3-201ENST00000262965 KTN1-AS1Q86SY8 53 aa8.55□□□□□ -1.04
TCF3-201ENST00000262965 SPANXA2-OT1Q8N9U9 137 aa8.55□□□□□ -1.04
TCF3-201ENST00000262965 SMR3BP02814 79 aaPredicted RBP8.54□□□□□ -1.04
TCF3-201ENST00000262965 ITPR2Q14571 2701 aa8.53□□□□□ -1.04
TCF3-201ENST00000262965 Q8N1X5 172 aa8.53□□□□□ -1.04
TCF3-201ENST00000262965 SPINT4Q6UDR6 99 aa8.53□□□□□ -1.04
TCF3-201ENST00000262965 IGLV5-37A0A075B6J1 123 aa8.52□□□□□ -1.05
TCF3-201ENST00000262965 APCP25054 2843 aa8.52□□□□□ -1.05
TCF3-201ENST00000262965 OXTP01178 125 aa8.52□□□□□ -1.05
TCF3-201ENST00000262965 IGLV7-43P04211 117 aa8.52□□□□□ -1.05
TCF3-201ENST00000262965 APLNQ9ULZ1 77 aa8.5□□□□□ -1.05
TCF3-201ENST00000262965 Q1T7F1 81 aa8.48□□□□□ -1.05
TCF3-201ENST00000262965 LINC00304Q8N9R0 145 aa8.48□□□□□ -1.05
TCF3-201ENST00000262965 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.47□□□□□ -1.05
TCF3-201ENST00000262965 CDC42SE1Q9NRR8 79 aa8.47□□□□□ -1.05
TCF3-201ENST00000262965 WWC2-AS2Q96NR7 200 aa8.47□□□□□ -1.05
TCF3-201ENST00000262965 WIPF1O43516 503 aa8.46□□□□□ -1.05
TCF3-201ENST00000262965 DCHS2Q6V1P9 2916 aa8.46□□□□□ -1.06
TCF3-201ENST00000262965 LCA10Q71F78 164 aa8.44□□□□□ -1.06
TCF3-201ENST00000262965 NIPBLQ6KC79 2804 aaeCLIP8.43□□□□□ -1.061e-6■■■□□ 18.6
TCF3-201ENST00000262965 NF1P21359 2839 aa8.43□□□□□ -1.06
TCF3-201ENST00000262965 Q8N9P0 234 aaPredicted RBP8.42□□□□□ -1.06
TCF3-201ENST00000262965 HRNRQ86YZ3 2850 aaPredicted RBP8.42□□□□□ -1.06
TCF3-201ENST00000262965 KMT2BQ9UMN6 2715 aaPredicted RBP8.42□□□□□ -1.06
TCF3-201ENST00000262965 IGLV7-46A0A075B6I9 117 aa8.41□□□□□ -1.06
TCF3-201ENST00000262965 SPRR1AP35321 89 aa8.41□□□□□ -1.06
TCF3-201ENST00000262965 MMP24-AS1A0A0U1RRL7 71 aa8.4□□□□□ -1.06
TCF3-201ENST00000262965 A0A0D9SG42 100 aa8.4□□□□□ -1.06
TCF3-201ENST00000262965 SMG1Q96Q15 3661 aaKnown RBP8.39□□□□□ -1.07
TCF3-201ENST00000262965 CRYBG3Q68DQ2 2970 aa8.39□□□□□ -1.07
TCF3-201ENST00000262965 HRES1P13985 223 aa8.38□□□□□ -1.07
TCF3-201ENST00000262965 TNP2Q05952 138 aa8.38□□□□□ -1.07
TCF3-201ENST00000262965 SPENQ96T58 3664 aaKnown RBP8.38□□□□□ -1.07
TCF3-201ENST00000262965 FBN2P35556 2912 aa8.38□□□□□ -1.07
TCF3-201ENST00000262965 KRTAP1-5Q9BYS1 174 aa8.33□□□□□ -1.08
TCF3-201ENST00000262965 PRAC1Q96KF2 57 aa8.33□□□□□ -1.08
TCF3-201ENST00000262965 CRIPTQ9P021 101 aa8.33□□□□□ -1.08
TCF3-201ENST00000262965 KRTAP26-1Q6PEX3 210 aa8.33□□□□□ -1.08
TCF3-201ENST00000262965 RBM12B-AS1Q9P1G2 102 aa8.33□□□□□ -1.08
TCF3-201ENST00000262965 Q5VV11 94 aa8.32□□□□□ -1.08
TCF3-201ENST00000262965 LINC00472Q9H8W2 130 aa8.32□□□□□ -1.08
TCF3-201ENST00000262965 Q75L30 129 aa8.31□□□□□ -1.08
TCF3-201ENST00000262965 LINC01554Q52M75 96 aa8.31□□□□□ -1.08
TCF3-201ENST00000262965 BSNQ9UPA5 3926 aa8.3□□□□□ -1.08
TCF3-201ENST00000262965 SPINK7P58062 85 aa8.28□□□□□ -1.08
TCF3-201ENST00000262965 LINC01558Q9Y6Z2 57 aa8.27□□□□□ -1.08
TCF3-201ENST00000262965 TENM4Q6N022 2769 aa8.25□□□□□ -1.09
TCF3-201ENST00000262965 SPRR1BP22528 89 aa8.22□□□□□ -1.09
TCF3-201ENST00000262965 A0A1B0GU33 70 aa8.21□□□□□ -1.1
TCF3-201ENST00000262965 Q5W150 140 aa8.2□□□□□ -1.1
TCF3-201ENST00000262965 COX6B2Q6YFQ2 88 aa8.19□□□□□ -1.1
TCF3-201ENST00000262965 KRTAP4-16G5E9R7 235 aaPredicted RBP8.17□□□□□ -1.1
TCF3-201ENST00000262965 PANO1I0J062 215 aa8.17□□□□□ -1.1
TCF3-201ENST00000262965 PLAC8Q9NZF1 115 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms