RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 SPTSSBQ8NFR3 76 aa9.59□□□□□ -0.87
XRCC1-201ENST00000262887 LINC01556Q5JQF7 62 aa9.58□□□□□ -0.88
XRCC1-201ENST00000262887 TLX1NBP0CAT3 122 aa9.58□□□□□ -0.88
XRCC1-201ENST00000262887 B9D2Q9BPU9 175 aa9.57□□□□□ -0.88
XRCC1-201ENST00000262887 WFDC13Q8IUB5 93 aa9.57□□□□□ -0.88
XRCC1-201ENST00000262887 ATP11AUNQ6ZP68 121 aa9.56□□□□□ -0.88
XRCC1-201ENST00000262887 LINC00476Q8WZB0 136 aa9.56□□□□□ -0.88
XRCC1-201ENST00000262887 LIMD2Q9BT23 127 aa9.56□□□□□ -0.88
XRCC1-201ENST00000262887 DEFB116Q30KQ4 102 aa9.56□□□□□ -0.88
XRCC1-201ENST00000262887 IGLV5-37A0A075B6J1 123 aa9.55□□□□□ -0.88
XRCC1-201ENST00000262887 PHF5AQ7RTV0 110 aaKnown RBP9.55□□□□□ -0.88
XRCC1-201ENST00000262887 Q8N9P0 234 aaPredicted RBP9.55□□□□□ -0.88
XRCC1-201ENST00000262887 LINC00208Q96KT6 92 aa9.55□□□□□ -0.88
XRCC1-201ENST00000262887 A0A0G2JQZ4 141 aa9.54□□□□□ -0.88
XRCC1-201ENST00000262887 A0A1W2PNN7 141 aa9.54□□□□□ -0.88
XRCC1-201ENST00000262887 C4orf48Q5BLP8 95 aa9.54□□□□□ -0.88
XRCC1-201ENST00000262887 KRTAP7-1Q8IUC3 87 aa9.53□□□□□ -0.88
XRCC1-201ENST00000262887 A6NN06 94 aa9.52□□□□□ -0.88
XRCC1-201ENST00000262887 LCA10Q71F78 164 aa9.52□□□□□ -0.89
XRCC1-201ENST00000262887 PRR15LQ9BU68 103 aa9.52□□□□□ -0.89
XRCC1-201ENST00000262887 IGFL1Q6UW32 110 aa9.51□□□□□ -0.89
XRCC1-201ENST00000262887 SPANXA2-OT1Q8N9U9 137 aa9.5□□□□□ -0.89
XRCC1-201ENST00000262887 C11orf45Q8TAV5 145 aa9.5□□□□□ -0.89
XRCC1-201ENST00000262887 A0A087WSZ3 146 aa9.49□□□□□ -0.89
XRCC1-201ENST00000262887 REG3GQ6UW15 175 aa9.49□□□□□ -0.89
XRCC1-201ENST00000262887 MGAM2Q2M2H8 2515 aa9.49□□□□□ -0.89
XRCC1-201ENST00000262887 H0Y9P7 68 aa9.48□□□□□ -0.89
XRCC1-201ENST00000262887 KRTAP29-1A8MX34 341 aaPredicted RBP9.47□□□□□ -0.89
XRCC1-201ENST00000262887 DEFB131BA0A096LNP1 70 aa9.47□□□□□ -0.89
XRCC1-201ENST00000262887 H3BPC8 53 aa9.47□□□□□ -0.89
XRCC1-201ENST00000262887 RPL37AP61513 92 aaKnown RBP9.47□□□□□ -0.89
XRCC1-201ENST00000262887 Q75L30 129 aa9.47□□□□□ -0.89
XRCC1-201ENST00000262887 DNAH10OSP0CZ25 163 aa9.46□□□□□ -0.89
XRCC1-201ENST00000262887 CASC10Q5T4H9 136 aa9.46□□□□□ -0.89
XRCC1-201ENST00000262887 A6NED7 52 aa9.46□□□□□ -0.9
XRCC1-201ENST00000262887 C7orf65Q6ZTY9 151 aa9.45□□□□□ -0.9
XRCC1-201ENST00000262887 CASC2Q6XLA1 102 aa9.44□□□□□ -0.9
XRCC1-201ENST00000262887 TENM3Q9P273 2699 aa9.44□□□□□ -0.9
XRCC1-201ENST00000262887 CMYA5Q8N3K9 4069 aa9.44□□□□□ -0.9
XRCC1-201ENST00000262887 LOC101927531A0A1B0GV80 90 aa9.42□□□□□ -0.9
XRCC1-201ENST00000262887 IGLV8-61A0A075B6I0 122 aa9.41□□□□□ -0.9
XRCC1-201ENST00000262887 PRLHP81277 87 aa9.41□□□□□ -0.9
XRCC1-201ENST00000262887 CDC42SE1Q9NRR8 79 aa9.41□□□□□ -0.9
XRCC1-201ENST00000262887 C9orf163Q8N9P6 203 aa9.4□□□□□ -0.91
XRCC1-201ENST00000262887 CNBPP62633 177 aaKnown RBP9.39□□□□□ -0.91
XRCC1-201ENST00000262887 C8orf87E5RJ46 101 aa9.38□□□□□ -0.91
XRCC1-201ENST00000262887 OXLD1Q5BKU9 147 aa9.38□□□□□ -0.91
XRCC1-201ENST00000262887 DNHD1Q96M86 4753 aa9.36□□□□□ -0.91
XRCC1-201ENST00000262887 CSMD3Q7Z407 3707 aa9.36□□□□□ -0.91
XRCC1-201ENST00000262887 A8MWP4 228 aa9.36□□□□□ -0.91
XRCC1-201ENST00000262887 COA5Q86WW8 74 aa9.36□□□□□ -0.91
XRCC1-201ENST00000262887 MOBPQ13875 183 aa9.35□□□□□ -0.91
XRCC1-201ENST00000262887 KRTAP10-11P60412 298 aa9.35□□□□□ -0.91
XRCC1-201ENST00000262887 IGKV2-24A0A0C4DH68 120 aa9.33□□□□□ -0.92
XRCC1-201ENST00000262887 IGLV7-46A0A075B6I9 117 aa9.32□□□□□ -0.92
XRCC1-201ENST00000262887 LINC00472Q9H8W2 130 aa9.32□□□□□ -0.92
XRCC1-201ENST00000262887 A0A096LNI7 61 aa9.3□□□□□ -0.92
XRCC1-201ENST00000262887 H0Y9J4 135 aa9.29□□□□□ -0.92
XRCC1-201ENST00000262887 COL7A1Q02388 2944 aa9.28□□□□□ -0.92
XRCC1-201ENST00000262887 LYSTQ99698 3801 aa9.28□□□□□ -0.92
XRCC1-201ENST00000262887 KRTAP24-1Q3LI83 254 aa9.27□□□□□ -0.92
XRCC1-201ENST00000262887 MMP24-AS1A0A0U1RRL7 71 aa9.27□□□□□ -0.93
XRCC1-201ENST00000262887 LINC01558Q9Y6Z2 57 aa9.26□□□□□ -0.93
XRCC1-201ENST00000262887 DNAH1Q9P2D7 4330 aa9.25□□□□□ -0.93
XRCC1-201ENST00000262887 PCOTHQ58A44 107 aa9.25□□□□□ -0.93
XRCC1-201ENST00000262887 TENM2Q9NT68 2774 aa9.24□□□□□ -0.93
XRCC1-201ENST00000262887 SPRR1BP22528 89 aa9.23□□□□□ -0.93
XRCC1-201ENST00000262887 PLAC8Q9NZF1 115 aa9.23□□□□□ -0.93
XRCC1-201ENST00000262887 H3BS24 57 aa9.23□□□□□ -0.93
XRCC1-201ENST00000262887 SPAG11AQ6PDA7 123 aa9.23□□□□□ -0.93
XRCC1-201ENST00000262887 SRRM2Q9UQ35 2752 aaKnown RBP9.21□□□□□ -0.93
XRCC1-201ENST00000262887 KRTAP11-1Q8IUC1 163 aa9.2□□□□□ -0.94
XRCC1-201ENST00000262887 SPINK7P58062 85 aa9.2□□□□□ -0.94
XRCC1-201ENST00000262887 TP53AIP1Q9HCN2 124 aa9.19□□□□□ -0.94
XRCC1-201ENST00000262887 LINC00313P59037 77 aa9.19□□□□□ -0.94
XRCC1-201ENST00000262887 STAB2Q8WWQ8 2551 aa9.18□□□□□ -0.94
XRCC1-201ENST00000262887 CHTF8P0CG12 524 aa9.17□□□□□ -0.94
XRCC1-201ENST00000262887 PRAC1Q96KF2 57 aa9.15□□□□□ -0.94
XRCC1-201ENST00000262887 ASB16-AS1Q495Z4 193 aa9.15□□□□□ -0.94
XRCC1-201ENST00000262887 Q6ZR54 194 aa9.15□□□□□ -0.94
XRCC1-201ENST00000262887 TGP01266 2768 aa9.13□□□□□ -0.95
XRCC1-201ENST00000262887 HRES1P13985 223 aa9.13□□□□□ -0.95
XRCC1-201ENST00000262887 LINC01554Q52M75 96 aa9.12□□□□□ -0.95
XRCC1-201ENST00000262887 KRTAP1-5Q9BYS1 174 aa9.12□□□□□ -0.95
XRCC1-201ENST00000262887 DNAH10Q8IVF4 4471 aa9.11□□□□□ -0.95
XRCC1-201ENST00000262887 Q96NJ1 140 aa9.11□□□□□ -0.95
XRCC1-201ENST00000262887 C8orf17Q9NRJ1 99 aa9.11□□□□□ -0.95
XRCC1-201ENST00000262887 IGLV9-49A0A0B4J1Y8 123 aa9.09□□□□□ -0.96
XRCC1-201ENST00000262887 MDFIQ99750 246 aa9.09□□□□□ -0.96
XRCC1-201ENST00000262887 MEGF8Q7Z7M0 2845 aa9.08□□□□□ -0.96
XRCC1-201ENST00000262887 DNAH3Q8TD57 4116 aa9.08□□□□□ -0.96
XRCC1-201ENST00000262887 IGHV6-1A0A0B4J1U7 121 aa9.07□□□□□ -0.96
XRCC1-201ENST00000262887 PRKDCP78527 4128 aaKnown RBP9.06□□□□□ -0.96
XRCC1-201ENST00000262887 ADM2Q7Z4H4 148 aa9.06□□□□□ -0.96
XRCC1-201ENST00000262887 PLA2G1BP04054 148 aaKnown RBP9.06□□□□□ -0.96
XRCC1-201ENST00000262887 HUWE1Q7Z6Z7 4374 aaKnown RBP9.05□□□□□ -0.96
XRCC1-201ENST00000262887 C14orf177Q52M58 125 aa9.04□□□□□ -0.96
XRCC1-201ENST00000262887 A0A1B0GVX0 72 aa9.04□□□□□ -0.96
XRCC1-201ENST00000262887 KRTAP13-1Q8IUC0 172 aa9.02□□□□□ -0.97
XRCC1-201ENST00000262887 MRPL34Q9BQ48 92 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms