RNA–Protein interactions for RNA: ENST00000262305.8

RAB11FIP3-201, Transcript of RAB11 family interacting protein 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RAB11FIP3, Length 4,831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-201ENST00000262305 SZT2Q5T011 3432 aa13.66□□□□□ -0.22
RAB11FIP3-201ENST00000262305 CD164Q04900 197 aa13.65□□□□□ -0.22
RAB11FIP3-201ENST00000262305 OCR1Q9BZK8 76 aa13.65□□□□□ -0.22
RAB11FIP3-201ENST00000262305 NBEAL2Q6ZNJ1 2754 aa13.65□□□□□ -0.23
RAB11FIP3-201ENST00000262305 LAMA1P25391 3075 aa13.62□□□□□ -0.23
RAB11FIP3-201ENST00000262305 KRTAP26-1Q6PEX3 210 aa13.62□□□□□ -0.23
RAB11FIP3-201ENST00000262305 SPANXA2-OT1Q8N9U9 137 aa13.62□□□□□ -0.23
RAB11FIP3-201ENST00000262305 BAHCC1Q9P281 2608 aa13.59□□□□□ -0.23
RAB11FIP3-201ENST00000262305 PLAC8Q9NZF1 115 aa13.59□□□□□ -0.23
RAB11FIP3-201ENST00000262305 UQCR11O14957 56 aa13.57□□□□□ -0.24
RAB11FIP3-201ENST00000262305 KRTAP1-5Q9BYS1 174 aa13.57□□□□□ -0.24
RAB11FIP3-201ENST00000262305 ATMQ13315 3056 aa13.55□□□□□ -0.24
RAB11FIP3-201ENST00000262305 CELSR3Q9NYQ7 3312 aa13.55□□□□□ -0.24
RAB11FIP3-201ENST00000262305 ITPR1Q14643 2758 aa13.54□□□□□ -0.24
RAB11FIP3-201ENST00000262305 VCANP13611 3396 aa13.51□□□□□ -0.25
RAB11FIP3-201ENST00000262305 FAM229BQ4G0N7 80 aa13.51□□□□□ -0.25
RAB11FIP3-201ENST00000262305 SPRR1BP22528 89 aa13.51□□□□□ -0.25
RAB11FIP3-201ENST00000262305 FRYLO94915 3013 aa13.5□□□□□ -0.25
RAB11FIP3-201ENST00000262305 COL12A1Q99715 3063 aa13.45□□□□□ -0.26
RAB11FIP3-201ENST00000262305 NSD1Q96L73 2696 aaPredicted RBP13.44□□□□□ -0.26
RAB11FIP3-201ENST00000262305 TACC2O95359 2948 aa13.44□□□□□ -0.26
RAB11FIP3-201ENST00000262305 ITPR2Q14571 2701 aa13.43□□□□□ -0.26
RAB11FIP3-201ENST00000262305 PRR26Q8N8Z3 221 aa13.43□□□□□ -0.26
RAB11FIP3-201ENST00000262305 ADGRG4Q8IZF6 3080 aa13.42□□□□□ -0.26
RAB11FIP3-201ENST00000262305 NBEAQ8NFP9 2946 aa13.41□□□□□ -0.26
RAB11FIP3-201ENST00000262305 KALRNO60229 2985 aa13.4□□□□□ -0.26
RAB11FIP3-201ENST00000262305 MIR22HGQ0VDD5 57 aa13.39□□□□□ -0.27
RAB11FIP3-201ENST00000262305 COX6B2Q6YFQ2 88 aa13.39□□□□□ -0.27
RAB11FIP3-201ENST00000262305 MMP24-AS1A0A0U1RRL7 71 aa13.38□□□□□ -0.27
RAB11FIP3-201ENST00000262305 Q8N1X5 172 aa13.37□□□□□ -0.27
RAB11FIP3-201ENST00000262305 BOD1L1Q8NFC6 3051 aa13.37□□□□□ -0.27
RAB11FIP3-201ENST00000262305 DMXL2Q8TDJ6 3036 aa13.36□□□□□ -0.27
RAB11FIP3-201ENST00000262305 LINC00472Q9H8W2 130 aa13.34□□□□□ -0.27
RAB11FIP3-201ENST00000262305 IGLV7-46A0A075B6I9 117 aa13.31□□□□□ -0.28
RAB11FIP3-201ENST00000262305 RBM12B-AS1Q9P1G2 102 aa13.3□□□□□ -0.28
RAB11FIP3-201ENST00000262305 DNAH14Q0VDD8 3507 aa13.28□□□□□ -0.28
RAB11FIP3-201ENST00000262305 FREM2Q5SZK8 3169 aa13.28□□□□□ -0.28
RAB11FIP3-201ENST00000262305 STAB2Q8WWQ8 2551 aa13.26□□□□□ -0.29
RAB11FIP3-201ENST00000262305 KRTAP4-16G5E9R7 235 aaPredicted RBP13.24□□□□□ -0.29
RAB11FIP3-201ENST00000262305 HRES1P13985 223 aa13.24□□□□□ -0.29
RAB11FIP3-201ENST00000262305 UTP20O75691 2785 aaKnown RBP13.23□□□□□ -0.29
RAB11FIP3-201ENST00000262305 COL6A3P12111 3177 aa13.22□□□□□ -0.29
RAB11FIP3-201ENST00000262305 Q1T7F1 81 aa13.2□□□□□ -0.3
RAB11FIP3-201ENST00000262305 LRBAP50851 2863 aa13.2□□□□□ -0.3
RAB11FIP3-201ENST00000262305 HIVEP1P15822 2718 aa13.2□□□□□ -0.3
RAB11FIP3-201ENST00000262305 KRTAP10-1P60331 282 aa13.16□□□□□ -0.3
RAB11FIP3-201ENST00000262305 KRTAP10-2P60368 255 aa13.16□□□□□ -0.3
RAB11FIP3-201ENST00000262305 CYSTM1Q9H1C7 97 aa13.15□□□□□ -0.3
RAB11FIP3-201ENST00000262305 Q6ZR54 194 aa13.15□□□□□ -0.3
RAB11FIP3-201ENST00000262305 ZCCHC13Q8WW36 166 aaKnown RBP13.14□□□□□ -0.31
RAB11FIP3-201ENST00000262305 ZZEF1O43149 2961 aa13.14□□□□□ -0.31
RAB11FIP3-201ENST00000262305 Q8N9P0 234 aaPredicted RBP13.14□□□□□ -0.31
RAB11FIP3-201ENST00000262305 PANO1I0J062 215 aa13.14□□□□□ -0.31
RAB11FIP3-201ENST00000262305 CDC42SE1Q9NRR8 79 aa13.13□□□□□ -0.31
RAB11FIP3-201ENST00000262305 TNRC18O15417 2968 aaPredicted RBP13.12□□□□□ -0.31
RAB11FIP3-201ENST00000262305 LINC00483Q53H64 154 aa13.12□□□□□ -0.31
RAB11FIP3-201ENST00000262305 Q6ZSA8 131 aa13.12□□□□□ -0.31
RAB11FIP3-201ENST00000262305 LCE6AA0A183 80 aa13.11□□□□□ -0.31
RAB11FIP3-201ENST00000262305 APCP25054 2843 aa13.1□□□□□ -0.31
RAB11FIP3-201ENST00000262305 NIPBLQ6KC79 2804 aaeCLIP13.08□□□□□ -0.32
RAB11FIP3-201ENST00000262305 Q5W150 140 aa13.06□□□□□ -0.32
RAB11FIP3-201ENST00000262305 KMT2BQ9UMN6 2715 aaPredicted RBP13.06□□□□□ -0.32
RAB11FIP3-201ENST00000262305 EYSQ5T1H1 3165 aa13.04□□□□□ -0.32
RAB11FIP3-201ENST00000262305 CRIPTQ9P021 101 aa13.04□□□□□ -0.32
RAB11FIP3-201ENST00000262305 KTN1-AS1Q86SY8 53 aa13□□□□□ -0.33
RAB11FIP3-201ENST00000262305 ZANQ9Y493 2812 aa12.99□□□□□ -0.33
RAB11FIP3-201ENST00000262305 A0A0D9SG42 100 aa12.99□□□□□ -0.33
RAB11FIP3-201ENST00000262305 SPINT4Q6UDR6 99 aa12.99□□□□□ -0.33
RAB11FIP3-201ENST00000262305 REV3LO60673 3130 aa12.99□□□□□ -0.33
RAB11FIP3-201ENST00000262305 LINC01558Q9Y6Z2 57 aa12.98□□□□□ -0.33
RAB11FIP3-201ENST00000262305 Q75L30 129 aa12.96□□□□□ -0.33
RAB11FIP3-201ENST00000262305 ASH1LQ9NR48 2969 aaKnown RBP12.96□□□□□ -0.33
RAB11FIP3-201ENST00000262305 LINC01554Q52M75 96 aa12.95□□□□□ -0.34
RAB11FIP3-201ENST00000262305 Q6ZRN7 208 aaPredicted RBP12.95□□□□□ -0.34
RAB11FIP3-201ENST00000262305 FP248Q71RG6 208 aaPredicted RBP12.94□□□□□ -0.34
RAB11FIP3-201ENST00000262305 A0A1B0GU33 70 aa12.93□□□□□ -0.34
RAB11FIP3-201ENST00000262305 DMXL1Q9Y485 3027 aa12.93□□□□□ -0.34
RAB11FIP3-201ENST00000262305 Q5XG85 94 aa12.92□□□□□ -0.34
RAB11FIP3-201ENST00000262305 SPINK7P58062 85 aa12.91□□□□□ -0.34
RAB11FIP3-201ENST00000262305 CELSR2Q9HCU4 2923 aa12.91□□□□□ -0.34
RAB11FIP3-201ENST00000262305 Q5VSD8 79 aa12.91□□□□□ -0.34
RAB11FIP3-201ENST00000262305 KRTAP29-1A8MX34 341 aaPredicted RBP12.89□□□□□ -0.35
RAB11FIP3-201ENST00000262305 KRTAP7-1Q8IUC3 87 aa12.87□□□□□ -0.35
RAB11FIP3-201ENST00000262305 LCA10Q71F78 164 aa12.86□□□□□ -0.35
RAB11FIP3-201ENST00000262305 KRTAP11-1Q8IUC1 163 aa12.86□□□□□ -0.35
RAB11FIP3-201ENST00000262305 CFAP47Q6ZTR5 3102 aa12.86□□□□□ -0.35
RAB11FIP3-201ENST00000262305 TENM4Q6N022 2769 aa12.86□□□□□ -0.35
RAB11FIP3-201ENST00000262305 A0A087X002 238 aa12.84□□□□□ -0.35
RAB11FIP3-201ENST00000262305 FLG2Q5D862 2391 aaPredicted RBP12.84□□□□□ -0.35
RAB11FIP3-201ENST00000262305 SPTBN5Q9NRC6 3674 aaKnown RBP12.83□□□□□ -0.36
RAB11FIP3-201ENST00000262305 DMBT1Q9UGM3 2413 aaPredicted RBP12.83□□□□□ -0.36
RAB11FIP3-201ENST00000262305 SPEGQ15772 3267 aa12.8□□□□□ -0.36
RAB11FIP3-201ENST00000262305 CSAG1Q6PB30 78 aa12.79□□□□□ -0.36
RAB11FIP3-201ENST00000262305 HRNRQ86YZ3 2850 aaPredicted RBP12.78□□□□□ -0.36
RAB11FIP3-201ENST00000262305 DCHS2Q6V1P9 2916 aa12.76□□□□□ -0.37
RAB11FIP3-201ENST00000262305 Q5VV11 94 aa12.76□□□□□ -0.37
RAB11FIP3-201ENST00000262305 DMAC1Q96GE9 116 aa12.73□□□□□ -0.37
RAB11FIP3-201ENST00000262305 S4R3F8 94 aa12.73□□□□□ -0.37
RAB11FIP3-201ENST00000262305 OXTP01178 125 aa12.72□□□□□ -0.37
RAB11FIP3-201ENST00000262305 USP34Q70CQ2 3546 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms