RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 IGFL1Q6UW32 110 aa10.25□□□□□ -0.77
PRPF40B-201ENST00000261897 IGLV9-49A0A0B4J1Y8 123 aa10.24□□□□□ -0.77
PRPF40B-201ENST00000261897 ZNF469Q96JG9 3925 aaPredicted RBP10.24□□□□□ -0.77
PRPF40B-201ENST00000261897 CDK2AP2O75956 126 aa10.22□□□□□ -0.77
PRPF40B-201ENST00000261897 Q5VV11 94 aa10.22□□□□□ -0.77
PRPF40B-201ENST00000261897 IGLV1-50A0A075B6I6 118 aa10.2□□□□□ -0.78
PRPF40B-201ENST00000261897 C16orf90A8MZG2 172 aa10.2□□□□□ -0.78
PRPF40B-201ENST00000261897 KRTAP1-3Q8IUG1 177 aa10.2□□□□□ -0.78
PRPF40B-201ENST00000261897 COA5Q86WW8 74 aa10.2□□□□□ -0.78
PRPF40B-201ENST00000261897 LIMD2Q9BT23 127 aa10.2□□□□□ -0.78
PRPF40B-201ENST00000261897 SPINK6Q6UWN8 80 aa10.2□□□□□ -0.78
PRPF40B-201ENST00000261897 CD164Q04900 197 aa10.18□□□□□ -0.78
PRPF40B-201ENST00000261897 CHTF8P0CG12 524 aa10.17□□□□□ -0.78
PRPF40B-201ENST00000261897 IGHV6-1A0A0B4J1U7 121 aa10.16□□□□□ -0.78
PRPF40B-201ENST00000261897 RBM12B-AS1Q9P1G2 102 aa10.16□□□□□ -0.78
PRPF40B-201ENST00000261897 UBE2DNLQ8IWF7 75 aa10.15□□□□□ -0.78
PRPF40B-201ENST00000261897 Q8N9P0 234 aaPredicted RBP10.15□□□□□ -0.78
PRPF40B-201ENST00000261897 KTN1-AS1Q86SY8 53 aa10.13□□□□□ -0.79
PRPF40B-201ENST00000261897 RETNLBQ9BQ08 111 aa10.12□□□□□ -0.79
PRPF40B-201ENST00000261897 TRRAPQ9Y4A5 3859 aa10.11□□□□□ -0.79
PRPF40B-201ENST00000261897 LINC01556Q5JQF7 62 aa10.11□□□□□ -0.79
PRPF40B-201ENST00000261897 PHF5AQ7RTV0 110 aaKnown RBP10.11□□□□□ -0.79
PRPF40B-201ENST00000261897 ZCCHC13Q8WW36 166 aaKnown RBP10.11□□□□□ -0.79
PRPF40B-201ENST00000261897 STAB2Q8WWQ8 2551 aa10.1□□□□□ -0.79
PRPF40B-201ENST00000261897 CYP4F30PQ9H0H9 118 aa10.1□□□□□ -0.79
PRPF40B-201ENST00000261897 SPRR4Q96PI1 79 aa10.09□□□□□ -0.79
PRPF40B-201ENST00000261897 OTOGQ6ZRI0 2925 aa10.09□□□□□ -0.79
PRPF40B-201ENST00000261897 KRTAP26-1Q6PEX3 210 aa10.08□□□□□ -0.8
PRPF40B-201ENST00000261897 LCA10Q71F78 164 aa10.07□□□□□ -0.8
PRPF40B-201ENST00000261897 KRTAP1-1Q07627 177 aa10.06□□□□□ -0.8
PRPF40B-201ENST00000261897 COL7A1Q02388 2944 aa10.06□□□□□ -0.8
PRPF40B-201ENST00000261897 LOC101927531A0A1B0GV80 90 aa10.05□□□□□ -0.8
PRPF40B-201ENST00000261897 PRAC1Q96KF2 57 aa10.05□□□□□ -0.8
PRPF40B-201ENST00000261897 TENM2Q9NT68 2774 aa10.04□□□□□ -0.8
PRPF40B-201ENST00000261897 LINC00588Q9Y4M8 146 aa10.04□□□□□ -0.8
PRPF40B-201ENST00000261897 TNP2Q05952 138 aa10.03□□□□□ -0.8
PRPF40B-201ENST00000261897 CNBPP62633 177 aaKnown RBP10.03□□□□□ -0.8
PRPF40B-201ENST00000261897 PRR26Q8N8Z3 221 aa10.03□□□□□ -0.8
PRPF40B-201ENST00000261897 A0A1B0GW54 56 aa10.02□□□□□ -0.8
PRPF40B-201ENST00000261897 ATP11AUNQ6ZP68 121 aa10.02□□□□□ -0.8
PRPF40B-201ENST00000261897 CSMD3Q7Z407 3707 aa10.02□□□□□ -0.81
PRPF40B-201ENST00000261897 A8MWP4 228 aa10.01□□□□□ -0.81
PRPF40B-201ENST00000261897 SPINK7P58062 85 aa10□□□□□ -0.81
PRPF40B-201ENST00000261897 TENM4Q6N022 2769 aa9.99□□□□□ -0.81
PRPF40B-201ENST00000261897 ANAPC11Q9NYG5 84 aa9.98□□□□□ -0.81
PRPF40B-201ENST00000261897 KRTAP7-1Q8IUC3 87 aa9.97□□□□□ -0.81
PRPF40B-201ENST00000261897 IGLV8-61A0A075B6I0 122 aa9.96□□□□□ -0.81
PRPF40B-201ENST00000261897 KMT2BQ9UMN6 2715 aaPredicted RBP9.96□□□□□ -0.82
PRPF40B-201ENST00000261897 KRTAP4-16G5E9R7 235 aaPredicted RBP9.96□□□□□ -0.82
PRPF40B-201ENST00000261897 LCE6AA0A183 80 aa9.95□□□□□ -0.82
PRPF40B-201ENST00000261897 KRTAP10-11P60412 298 aa9.93□□□□□ -0.82
PRPF40B-201ENST00000261897 SPRR1AP35321 89 aa9.93□□□□□ -0.82
PRPF40B-201ENST00000261897 C7orf65Q6ZTY9 151 aa9.93□□□□□ -0.82
PRPF40B-201ENST00000261897 MOBPQ13875 183 aa9.92□□□□□ -0.82
PRPF40B-201ENST00000261897 SPANXA2-OT1Q8N9U9 137 aa9.92□□□□□ -0.82
PRPF40B-201ENST00000261897 CDC42SE1Q9NRR8 79 aa9.92□□□□□ -0.82
PRPF40B-201ENST00000261897 DNAH10OSP0CZ25 163 aa9.92□□□□□ -0.82
PRPF40B-201ENST00000261897 Q75L30 129 aa9.9□□□□□ -0.83
PRPF40B-201ENST00000261897 H3BPC8 53 aa9.89□□□□□ -0.83
PRPF40B-201ENST00000261897 J3QKU1 62 aa9.88□□□□□ -0.83
PRPF40B-201ENST00000261897 K7EIL1 84 aa9.88□□□□□ -0.83
PRPF40B-201ENST00000261897 H3BNG1 76 aa9.88□□□□□ -0.83
PRPF40B-201ENST00000261897 KRTAP29-1A8MX34 341 aaPredicted RBP9.87□□□□□ -0.83
PRPF40B-201ENST00000261897 TLX1NBP0CAT3 122 aa9.87□□□□□ -0.83
PRPF40B-201ENST00000261897 MDFIQ99750 246 aa9.87□□□□□ -0.83
PRPF40B-201ENST00000261897 FLG2Q5D862 2391 aaPredicted RBP9.87□□□□□ -0.83
PRPF40B-201ENST00000261897 SPINK1P00995 79 aa9.86□□□□□ -0.83
PRPF40B-201ENST00000261897 DMBT1Q9UGM3 2413 aaPredicted RBP9.85□□□□□ -0.83
PRPF40B-201ENST00000261897 MMP24-AS1A0A0U1RRL7 71 aa9.85□□□□□ -0.83
PRPF40B-201ENST00000261897 IGLV7-46A0A075B6I9 117 aa9.85□□□□□ -0.83
PRPF40B-201ENST00000261897 ADM2Q7Z4H4 148 aa9.85□□□□□ -0.83
PRPF40B-201ENST00000261897 CIRBP-AS1Q8TBR5 109 aa9.84□□□□□ -0.83
PRPF40B-201ENST00000261897 PLA2G2DQ9UNK4 145 aa9.84□□□□□ -0.83
PRPF40B-201ENST00000261897 KRTAP11-1Q8IUC1 163 aa9.84□□□□□ -0.83
PRPF40B-201ENST00000261897 C8orf17Q9NRJ1 99 aa9.84□□□□□ -0.83
PRPF40B-201ENST00000261897 HRES1P13985 223 aa9.83□□□□□ -0.84
PRPF40B-201ENST00000261897 LINC00313P59037 77 aa9.82□□□□□ -0.84
PRPF40B-201ENST00000261897 LINC00472Q9H8W2 130 aa9.82□□□□□ -0.84
PRPF40B-201ENST00000261897 C9orf163Q8N9P6 203 aa9.81□□□□□ -0.84
PRPF40B-201ENST00000261897 A0A1B0GU69 56 aa9.8□□□□□ -0.84
PRPF40B-201ENST00000261897 IGLV5-37A0A075B6J1 123 aa9.79□□□□□ -0.84
PRPF40B-201ENST00000261897 A6NN06 94 aa9.79□□□□□ -0.84
PRPF40B-201ENST00000261897 TP53AIP1Q9HCN2 124 aa9.78□□□□□ -0.84
PRPF40B-201ENST00000261897 MRPL34Q9BQ48 92 aaKnown RBP9.76□□□□□ -0.85
PRPF40B-201ENST00000261897 A0A087X002 238 aa9.75□□□□□ -0.85
PRPF40B-201ENST00000261897 NOTCH2NLQ7Z3S9 236 aa9.75□□□□□ -0.85
PRPF40B-201ENST00000261897 LINC01558Q9Y6Z2 57 aa9.75□□□□□ -0.85
PRPF40B-201ENST00000261897 KRTAP1-5Q9BYS1 174 aa9.74□□□□□ -0.85
PRPF40B-201ENST00000261897 IGKV2D-30A0A075B6S6 120 aa9.73□□□□□ -0.85
PRPF40B-201ENST00000261897 IGKV2-30P06310 120 aa9.73□□□□□ -0.85
PRPF40B-201ENST00000261897 A0A1B0GVX0 72 aa9.72□□□□□ -0.85
PRPF40B-201ENST00000261897 C4orf48Q5BLP8 95 aa9.71□□□□□ -0.86
PRPF40B-201ENST00000261897 C8orf87E5RJ46 101 aa9.7□□□□□ -0.86
PRPF40B-201ENST00000261897 ACYP2P14621 99 aa9.7□□□□□ -0.86
PRPF40B-201ENST00000261897 C14orf177Q52M58 125 aa9.68□□□□□ -0.86
PRPF40B-201ENST00000261897 PANO1I0J062 215 aa9.67□□□□□ -0.86
PRPF40B-201ENST00000261897 H3BS24 57 aa9.67□□□□□ -0.86
PRPF40B-201ENST00000261897 RTL8CO15255 209 aa9.64□□□□□ -0.87
PRPF40B-201ENST00000261897 Q5W150 140 aa9.61□□□□□ -0.87
PRPF40B-201ENST00000261897 MIR22HGQ0VDD5 57 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms