RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 FAM104AQ969W3 186 aa8.72□□□□□ -1.01
CDH1-201ENST00000261769 KRTAP1-5Q9BYS1 174 aa8.72□□□□□ -1.01
CDH1-201ENST00000261769 IGLV7-46A0A075B6I9 117 aa8.71□□□□□ -1.01
CDH1-201ENST00000261769 PSPHP1O15172 72 aa8.7□□□□□ -1.02
CDH1-201ENST00000261769 STAB2Q8WWQ8 2551 aa8.68□□□□□ -1.02
CDH1-201ENST00000261769 FRYLO94915 3013 aa8.68□□□□□ -1.02
CDH1-201ENST00000261769 CDH23Q9H251 3354 aa8.66□□□□□ -1.02
CDH1-201ENST00000261769 FRYQ5TBA9 3013 aa8.65□□□□□ -1.02
CDH1-201ENST00000261769 Q6ZSA8 131 aa8.64□□□□□ -1.03
CDH1-201ENST00000261769 Q5VSD8 79 aa8.63□□□□□ -1.03
CDH1-201ENST00000261769 NBEAL2Q6ZNJ1 2754 aa8.63□□□□□ -1.03
CDH1-201ENST00000261769 SPRR1AP35321 89 aa8.63□□□□□ -1.03
CDH1-201ENST00000261769 Q6ZR54 194 aa8.63□□□□□ -1.03
CDH1-201ENST00000261769 ATMQ13315 3056 aa8.62□□□□□ -1.03
CDH1-201ENST00000261769 KRTAP10-1P60331 282 aa8.61□□□□□ -1.03
CDH1-201ENST00000261769 KMT2BQ9UMN6 2715 aaPredicted RBP8.61□□□□□ -1.03
CDH1-201ENST00000261769 COL12A1Q99715 3063 aa8.61□□□□□ -1.03
CDH1-201ENST00000261769 KRTAP26-1Q6PEX3 210 aa8.6□□□□□ -1.03
CDH1-201ENST00000261769 TACC2O95359 2948 aa8.6□□□□□ -1.03
CDH1-201ENST00000261769 TENM4Q6N022 2769 aa8.6□□□□□ -1.03
CDH1-201ENST00000261769 TNRC18O15417 2968 aaPredicted RBP8.59□□□□□ -1.03
CDH1-201ENST00000261769 KRTAP10-2P60368 255 aa8.59□□□□□ -1.03
CDH1-201ENST00000261769 REV3LO60673 3130 aa8.55□□□□□ -1.04
CDH1-201ENST00000261769 SPRR1BP22528 89 aa8.55□□□□□ -1.04
CDH1-201ENST00000261769 UTP20O75691 2785 aaKnown RBP8.54□□□□□ -1.04
CDH1-201ENST00000261769 DMXL2Q8TDJ6 3036 aa8.53□□□□□ -1.04
CDH1-201ENST00000261769 APCP25054 2843 aa8.53□□□□□ -1.04
CDH1-201ENST00000261769 COA5Q86WW8 74 aa8.51□□□□□ -1.05
CDH1-201ENST00000261769 SZT2Q5T011 3432 aa8.5□□□□□ -1.05
CDH1-201ENST00000261769 IGLV8-61A0A075B6I0 122 aa8.49□□□□□ -1.05
CDH1-201ENST00000261769 LINC01600Q96MT4 127 aa8.49□□□□□ -1.05
CDH1-201ENST00000261769 Q8NDZ9 215 aa8.49□□□□□ -1.05
CDH1-201ENST00000261769 DNAH14Q0VDD8 3507 aa8.48□□□□□ -1.05
CDH1-201ENST00000261769 KLKP1Q107X0 134 aa8.47□□□□□ -1.05
CDH1-201ENST00000261769 SEC61BP60468 96 aaKnown RBP8.46□□□□□ -1.05
CDH1-201ENST00000261769 LAMA1P25391 3075 aa8.46□□□□□ -1.06
CDH1-201ENST00000261769 DMBT1Q9UGM3 2413 aaPredicted RBP8.45□□□□□ -1.06
CDH1-201ENST00000261769 COL6A3P12111 3177 aa8.45□□□□□ -1.06
CDH1-201ENST00000261769 NIPBLQ6KC79 2804 aaeCLIP8.45□□□□□ -1.06
CDH1-201ENST00000261769 M0R2T5 61 aa8.43□□□□□ -1.06
CDH1-201ENST00000261769 VCANP13611 3396 aa8.43□□□□□ -1.06
CDH1-201ENST00000261769 Q8N1X5 172 aa8.43□□□□□ -1.06
CDH1-201ENST00000261769 UQCR11O14957 56 aa8.42□□□□□ -1.06
CDH1-201ENST00000261769 NBEAQ8NFP9 2946 aa8.4□□□□□ -1.07
CDH1-201ENST00000261769 OXTP01178 125 aa8.39□□□□□ -1.07
CDH1-201ENST00000261769 ZCCHC13Q8WW36 166 aaKnown RBP8.39□□□□□ -1.07
CDH1-201ENST00000261769 EYSQ5T1H1 3165 aa8.39□□□□□ -1.07
CDH1-201ENST00000261769 SPANXA2-OT1Q8N9U9 137 aa8.38□□□□□ -1.07
CDH1-201ENST00000261769 ZZEF1O43149 2961 aa8.38□□□□□ -1.07
CDH1-201ENST00000261769 CELSR3Q9NYQ7 3312 aa8.38□□□□□ -1.07
CDH1-201ENST00000261769 FP248Q71RG6 208 aaPredicted RBP8.37□□□□□ -1.07
CDH1-201ENST00000261769 A8MUN3 132 aa8.37□□□□□ -1.07
CDH1-201ENST00000261769 Q6ZRN7 208 aaPredicted RBP8.37□□□□□ -1.07
CDH1-201ENST00000261769 PANO1I0J062 215 aa8.36□□□□□ -1.07
CDH1-201ENST00000261769 KALRNO60229 2985 aa8.36□□□□□ -1.07
CDH1-201ENST00000261769 ADGRG4Q8IZF6 3080 aa8.36□□□□□ -1.07
CDH1-201ENST00000261769 LINC00483Q53H64 154 aa8.35□□□□□ -1.07
CDH1-201ENST00000261769 CYP4F30PQ9H0H9 118 aa8.35□□□□□ -1.07
CDH1-201ENST00000261769 FLG2Q5D862 2391 aaPredicted RBP8.35□□□□□ -1.07
CDH1-201ENST00000261769 LRBAP50851 2863 aa8.35□□□□□ -1.07
CDH1-201ENST00000261769 BOD1L1Q8NFC6 3051 aa8.34□□□□□ -1.07
CDH1-201ENST00000261769 MMP24-AS1A0A0U1RRL7 71 aa8.33□□□□□ -1.08
CDH1-201ENST00000261769 LINC00472Q9H8W2 130 aa8.33□□□□□ -1.08
CDH1-201ENST00000261769 OCR1Q9BZK8 76 aa8.31□□□□□ -1.08
CDH1-201ENST00000261769 H7BZZ5 65 aa8.31□□□□□ -1.08
CDH1-201ENST00000261769 LINC01554Q52M75 96 aa8.3□□□□□ -1.08
CDH1-201ENST00000261769 CSAG1Q6PB30 78 aa8.28□□□□□ -1.08
CDH1-201ENST00000261769 KRTAP4-16G5E9R7 235 aaPredicted RBP8.28□□□□□ -1.08
CDH1-201ENST00000261769 MIR22HGQ0VDD5 57 aa8.26□□□□□ -1.09
CDH1-201ENST00000261769 CRYBG3Q68DQ2 2970 aa8.26□□□□□ -1.09
CDH1-201ENST00000261769 HRES1P13985 223 aa8.26□□□□□ -1.09
CDH1-201ENST00000261769 SPINK7P58062 85 aa8.26□□□□□ -1.09
CDH1-201ENST00000261769 ZANQ9Y493 2812 aa8.24□□□□□ -1.09
CDH1-201ENST00000261769 DMXL1Q9Y485 3027 aa8.24□□□□□ -1.09
CDH1-201ENST00000261769 CELSR2Q9HCU4 2923 aa8.23□□□□□ -1.09
CDH1-201ENST00000261769 SPEGQ15772 3267 aa8.21□□□□□ -1.09
CDH1-201ENST00000261769 A0A087X002 238 aa8.21□□□□□ -1.1
CDH1-201ENST00000261769 Q5XG85 94 aa8.21□□□□□ -1.1
CDH1-201ENST00000261769 SPINT4Q6UDR6 99 aa8.19□□□□□ -1.1
CDH1-201ENST00000261769 Q5W150 140 aa8.18□□□□□ -1.1
CDH1-201ENST00000261769 CRIPTQ9P021 101 aa8.18□□□□□ -1.1
CDH1-201ENST00000261769 CYSTM1Q9H1C7 97 aa8.18□□□□□ -1.1
CDH1-201ENST00000261769 Q8N9P0 234 aaPredicted RBP8.17□□□□□ -1.1
CDH1-201ENST00000261769 S4R3F8 94 aa8.17□□□□□ -1.1
CDH1-201ENST00000261769 KTN1-AS1Q86SY8 53 aa8.17□□□□□ -1.1
CDH1-201ENST00000261769 RPS29P62273 56 aaKnown RBP8.17□□□□□ -1.1
CDH1-201ENST00000261769 DCHS2Q6V1P9 2916 aa8.16□□□□□ -1.1
CDH1-201ENST00000261769 A0A0D9SG42 100 aa8.16□□□□□ -1.1
CDH1-201ENST00000261769 FREM2Q5SZK8 3169 aa8.16□□□□□ -1.1
CDH1-201ENST00000261769 CAMK2N1Q7Z7J9 78 aa8.13□□□□□ -1.11
CDH1-201ENST00000261769 ASB16-AS1Q495Z4 193 aa8.09□□□□□ -1.11
CDH1-201ENST00000261769 ASH1LQ9NR48 2969 aaKnown RBP8.08□□□□□ -1.12
CDH1-201ENST00000261769 SPTBN5Q9NRC6 3674 aaKnown RBP8.08□□□□□ -1.12
CDH1-201ENST00000261769 A0A1B0GU33 70 aa8.08□□□□□ -1.12
CDH1-201ENST00000261769 KRTAP11-1Q8IUC1 163 aa8.08□□□□□ -1.12
CDH1-201ENST00000261769 NF1P21359 2839 aa8.07□□□□□ -1.12
CDH1-201ENST00000261769 LCA10Q71F78 164 aa8.07□□□□□ -1.12
CDH1-201ENST00000261769 CDC42SE1Q9NRR8 79 aa8.06□□□□□ -1.12
CDH1-201ENST00000261769 KRTAP7-1Q8IUC3 87 aa8.04□□□□□ -1.12
CDH1-201ENST00000261769 KRTAP13-1Q8IUC0 172 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms