RNA–Protein interactions for RNA: ENST00000261438.9

KLF3-201, Transcript of Kruppel like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KLF3, Length 5,122 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLF3-201ENST00000261438 VCANP13611 3396 aa10.83□□□□□ -0.68
KLF3-201ENST00000261438 CRIPTQ9P021 101 aa10.82□□□□□ -0.68
KLF3-201ENST00000261438 LINC00472Q9H8W2 130 aa10.81□□□□□ -0.68
KLF3-201ENST00000261438 TNP2Q05952 138 aa10.79□□□□□ -0.68
KLF3-201ENST00000261438 KRTAP24-1Q3LI83 254 aa10.79□□□□□ -0.68
KLF3-201ENST00000261438 PSORS1C2Q9UIG4 136 aa10.78□□□□□ -0.68
KLF3-201ENST00000261438 Q8N1X5 172 aa10.78□□□□□ -0.68
KLF3-201ENST00000261438 CSAG1Q6PB30 78 aa10.77□□□□□ -0.68
KLF3-201ENST00000261438 ITPR3Q14573 2671 aa10.76□□□□□ -0.69
KLF3-201ENST00000261438 LAMA1P25391 3075 aa10.76□□□□□ -0.69
KLF3-201ENST00000261438 APLNQ9ULZ1 77 aa10.75□□□□□ -0.69
KLF3-201ENST00000261438 KRTAP1-3Q8IUG1 177 aa10.73□□□□□ -0.69
KLF3-201ENST00000261438 PLA2G1BP04054 148 aaKnown RBP10.72□□□□□ -0.69
KLF3-201ENST00000261438 IGLV7-43P04211 117 aa10.7□□□□□ -0.7
KLF3-201ENST00000261438 MAST4O15021 2626 aa10.7□□□□□ -0.7
KLF3-201ENST00000261438 SPRR1BP22528 89 aa10.69□□□□□ -0.7
KLF3-201ENST00000261438 KRTAP29-1A8MX34 341 aaPredicted RBP10.68□□□□□ -0.7
KLF3-201ENST00000261438 KRTAP26-1Q6PEX3 210 aa10.68□□□□□ -0.7
KLF3-201ENST00000261438 A0A087WTM6 91 aa10.68□□□□□ -0.7
KLF3-201ENST00000261438 GCN1Q92616 2671 aaKnown RBP10.67□□□□□ -0.7
KLF3-201ENST00000261438 LCE6AA0A183 80 aa10.66□□□□□ -0.7
KLF3-201ENST00000261438 A6NN06 94 aa10.66□□□□□ -0.7
KLF3-201ENST00000261438 A0A1B0GU33 70 aa10.65□□□□□ -0.71
KLF3-201ENST00000261438 K7EIL1 84 aa10.64□□□□□ -0.71
KLF3-201ENST00000261438 KRTAP1-1Q07627 177 aa10.64□□□□□ -0.71
KLF3-201ENST00000261438 KALRNO60229 2985 aa10.63□□□□□ -0.71
KLF3-201ENST00000261438 CFAP46Q8IYW2 2715 aa10.62□□□□□ -0.71
KLF3-201ENST00000261438 KRTAP4-16G5E9R7 235 aaPredicted RBP10.62□□□□□ -0.71
KLF3-201ENST00000261438 A0A0D9SG42 100 aa10.61□□□□□ -0.71
KLF3-201ENST00000261438 A8MU10 97 aa10.61□□□□□ -0.71
KLF3-201ENST00000261438 UNC79Q9P2D8 2635 aa10.6□□□□□ -0.71
KLF3-201ENST00000261438 SZT2Q5T011 3432 aa10.6□□□□□ -0.71
KLF3-201ENST00000261438 NBEAL2Q6ZNJ1 2754 aa10.59□□□□□ -0.71
KLF3-201ENST00000261438 C9orf92A6NGG3 77 aa10.58□□□□□ -0.72
KLF3-201ENST00000261438 Q5W150 140 aa10.58□□□□□ -0.72
KLF3-201ENST00000261438 ASB16-AS1Q495Z4 193 aa10.57□□□□□ -0.72
KLF3-201ENST00000261438 ZNF292O60281 2723 aa10.57□□□□□ -0.72
KLF3-201ENST00000261438 Q6ZR54 194 aa10.57□□□□□ -0.72
KLF3-201ENST00000261438 LINC00304Q8N9R0 145 aa10.57□□□□□ -0.72
KLF3-201ENST00000261438 FRYLO94915 3013 aa10.55□□□□□ -0.72
KLF3-201ENST00000261438 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.54□□□□□ -0.72
KLF3-201ENST00000261438 DMAC1Q96GE9 116 aa10.51□□□□□ -0.73
KLF3-201ENST00000261438 SPEGQ15772 3267 aa10.5□□□□□ -0.73
KLF3-201ENST00000261438 BOD1L1Q8NFC6 3051 aa10.48□□□□□ -0.73
KLF3-201ENST00000261438 ADGRG4Q8IZF6 3080 aa10.48□□□□□ -0.73
KLF3-201ENST00000261438 NOTCH1P46531 2555 aa10.47□□□□□ -0.73
KLF3-201ENST00000261438 SPATA8Q6RVD6 105 aa10.44□□□□□ -0.74
KLF3-201ENST00000261438 TEX15Q9BXT5 2789 aa10.43□□□□□ -0.74
KLF3-201ENST00000261438 HELZ2Q9BYK8 2649 aaKnown RBP10.43□□□□□ -0.74
KLF3-201ENST00000261438 DMXL2Q8TDJ6 3036 aa10.41□□□□□ -0.74
KLF3-201ENST00000261438 WWC2-AS2Q96NR7 200 aa10.39□□□□□ -0.75
KLF3-201ENST00000261438 ADM2Q7Z4H4 148 aa10.38□□□□□ -0.75
KLF3-201ENST00000261438 NBEAL1Q6ZS30 2694 aa10.38□□□□□ -0.75
KLF3-201ENST00000261438 ITPR1Q14643 2758 aa10.37□□□□□ -0.75
KLF3-201ENST00000261438 ASH1LQ9NR48 2969 aaKnown RBP10.36□□□□□ -0.75
KLF3-201ENST00000261438 TACC2O95359 2948 aa10.35□□□□□ -0.75
KLF3-201ENST00000261438 ATMQ13315 3056 aa10.35□□□□□ -0.75
KLF3-201ENST00000261438 CFAP47Q6ZTR5 3102 aa10.33□□□□□ -0.76
KLF3-201ENST00000261438 COL6A5A8TX70 2615 aa10.32□□□□□ -0.76
KLF3-201ENST00000261438 KRTAP1-5Q9BYS1 174 aa10.32□□□□□ -0.76
KLF3-201ENST00000261438 PLAC8Q9NZF1 115 aa10.32□□□□□ -0.76
KLF3-201ENST00000261438 COL6A3P12111 3177 aa10.31□□□□□ -0.76
KLF3-201ENST00000261438 LRBAP50851 2863 aa10.29□□□□□ -0.76
KLF3-201ENST00000261438 LUZP6Q538Z0 58 aa10.29□□□□□ -0.76
KLF3-201ENST00000261438 UBR5O95071 2799 aaPredicted RBP10.29□□□□□ -0.76
KLF3-201ENST00000261438 LINC00483Q53H64 154 aa10.29□□□□□ -0.76
KLF3-201ENST00000261438 TEP1Q99973 2627 aaKnown RBP10.29□□□□□ -0.76
KLF3-201ENST00000261438 A0A087X002 238 aa10.28□□□□□ -0.76
KLF3-201ENST00000261438 NOTCH2NLQ7Z3S9 236 aa10.28□□□□□ -0.76
KLF3-201ENST00000261438 REV3LO60673 3130 aa10.28□□□□□ -0.76
KLF3-201ENST00000261438 ROMO1P60602 79 aa10.25□□□□□ -0.77
KLF3-201ENST00000261438 KRTAP7-1Q8IUC3 87 aa10.24□□□□□ -0.77
KLF3-201ENST00000261438 SETXQ7Z333 2677 aaKnown RBP10.23□□□□□ -0.77
KLF3-201ENST00000261438 H1FX-AS1Q4G0G2 97 aa10.22□□□□□ -0.77
KLF3-201ENST00000261438 SMR3BP02814 79 aaPredicted RBP10.21□□□□□ -0.77
KLF3-201ENST00000261438 STAB1Q9NY15 2570 aa10.21□□□□□ -0.77
KLF3-201ENST00000261438 COL12A1Q99715 3063 aa10.2□□□□□ -0.78
KLF3-201ENST00000261438 RPL37P61927 97 aaKnown RBP10.19□□□□□ -0.78
KLF3-201ENST00000261438 ZZEF1O43149 2961 aa10.19□□□□□ -0.78
KLF3-201ENST00000261438 KRTAP25-1Q3LHN0 102 aa10.19□□□□□ -0.78
KLF3-201ENST00000261438 BAHCC1Q9P281 2608 aa10.18□□□□□ -0.78
KLF3-201ENST00000261438 PANO1I0J062 215 aa10.16□□□□□ -0.78
KLF3-201ENST00000261438 KRTAP11-1Q8IUC1 163 aa10.16□□□□□ -0.78
KLF3-201ENST00000261438 FLNCQ14315 2725 aa10.13□□□□□ -0.79
KLF3-201ENST00000261438 MYO15AQ9UKN7 3530 aa10.09□□□□□ -0.79
KLF3-201ENST00000261438 IGSF10Q6WRI0 2623 aa10.09□□□□□ -0.79
KLF3-201ENST00000261438 DMBT1Q9UGM3 2413 aaPredicted RBP10.05□□□□□ -0.8
KLF3-201ENST00000261438 EYSQ5T1H1 3165 aa10.05□□□□□ -0.8
KLF3-201ENST00000261438 A0A0A0MQY5 61 aa10.04□□□□□ -0.8
KLF3-201ENST00000261438 S4R3F8 94 aa10.02□□□□□ -0.81
KLF3-201ENST00000261438 NSD1Q96L73 2696 aaPredicted RBP10.01□□□□□ -0.81
KLF3-201ENST00000261438 STAB2Q8WWQ8 2551 aa9.99□□□□□ -0.81
KLF3-201ENST00000261438 KRTAP16-1A8MUX0 517 aa9.99□□□□□ -0.81
KLF3-201ENST00000261438 SPTBN5Q9NRC6 3674 aaKnown RBP9.97□□□□□ -0.81
KLF3-201ENST00000261438 APCP25054 2843 aa9.97□□□□□ -0.81
KLF3-201ENST00000261438 UTP20O75691 2785 aaKnown RBP9.97□□□□□ -0.81
KLF3-201ENST00000261438 LOC400499M0QZD8 3231 aa9.96□□□□□ -0.81
KLF3-201ENST00000261438 USP34Q70CQ2 3546 aa9.94□□□□□ -0.82
KLF3-201ENST00000261438 KRTAP13-1Q8IUC0 172 aa9.94□□□□□ -0.82
KLF3-201ENST00000261438 TNRC18O15417 2968 aaPredicted RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 253.1 ms