RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 KLK9Q2XQG4 91 aa1.56□□□□□ -2.16
CCDC54-201ENST00000261058 DEFB105AQ8NG35 78 aa1.56□□□□□ -2.16
CCDC54-201ENST00000261058 FLG2Q5D862 2391 aaPredicted RBP1.55□□□□□ -2.16
CCDC54-201ENST00000261058 WNK2Q9Y3S1 2297 aa1.55□□□□□ -2.16
CCDC54-201ENST00000261058 KRTAP21-3Q3LHN1 58 aa1.54□□□□□ -2.16
CCDC54-201ENST00000261058 TPRP12270 2363 aaKnown RBP1.53□□□□□ -2.16
CCDC54-201ENST00000261058 STATHP02808 62 aa1.53□□□□□ -2.16
CCDC54-201ENST00000261058 DEFB119Q8N690 84 aa1.53□□□□□ -2.16
CCDC54-201ENST00000261058 APLNQ9ULZ1 77 aa1.53□□□□□ -2.16
CCDC54-201ENST00000261058 PRLHP81277 87 aa1.52□□□□□ -2.17
CCDC54-201ENST00000261058 FAM208BQ5VWN6 2430 aa1.52□□□□□ -2.17
CCDC54-201ENST00000261058 ZDBF2Q9HCK1 2354 aa1.51□□□□□ -2.17
CCDC54-201ENST00000261058 H0YGG7 62 aa1.51□□□□□ -2.17
CCDC54-201ENST00000261058 SPRR1AP35321 89 aa1.51□□□□□ -2.17
CCDC54-201ENST00000261058 COX14Q96I36 57 aa1.5□□□□□ -2.17
CCDC54-201ENST00000261058 PRO0255Q9UI72 69 aa1.5□□□□□ -2.17
CCDC54-201ENST00000261058 NAV3Q8IVL0 2385 aa1.5□□□□□ -2.17
CCDC54-201ENST00000261058 Q5VSD8 79 aa1.49□□□□□ -2.17
CCDC54-201ENST00000261058 PIEZO2Q9H5I5 2752 aa1.49□□□□□ -2.17
CCDC54-201ENST00000261058 IGF2RP11717 2491 aa1.49□□□□□ -2.17
CCDC54-201ENST00000261058 SPRR1BP22528 89 aa1.49□□□□□ -2.17
CCDC54-201ENST00000261058 PCNX1Q96RV3 2341 aa1.48□□□□□ -2.17
CCDC54-201ENST00000261058 APELAP0DMC3 54 aa1.48□□□□□ -2.17
CCDC54-201ENST00000261058 CRCT1Q9UGL9 99 aa1.48□□□□□ -2.17
CCDC54-201ENST00000261058 S4R3F8 94 aa1.48□□□□□ -2.17
CCDC54-201ENST00000261058 NOP10Q9NPE3 64 aaKnown RBP1.47□□□□□ -2.17
CCDC54-201ENST00000261058 JMJD1CQ15652 2540 aa1.46□□□□□ -2.18
CCDC54-201ENST00000261058 SPINK1P00995 79 aa1.46□□□□□ -2.18
CCDC54-201ENST00000261058 PKDREJQ9NTG1 2253 aa1.45□□□□□ -2.18
CCDC54-201ENST00000261058 PTPRZ1P23471 2315 aaPredicted RBP1.45□□□□□ -2.18
CCDC54-201ENST00000261058 RP1L1Q8IWN7 2480 aaPredicted RBP1.43□□□□□ -2.18
CCDC54-201ENST00000261058 HELZ2Q9BYK8 2649 aaKnown RBP1.43□□□□□ -2.18
CCDC54-201ENST00000261058 ROS1P08922 2347 aa1.43□□□□□ -2.18
CCDC54-201ENST00000261058 H3BUX3 64 aa1.42□□□□□ -2.18
CCDC54-201ENST00000261058 RHPN1-AS1Q9BWJ2 59 aa1.42□□□□□ -2.18
CCDC54-201ENST00000261058 ZNF462Q96JM2 2506 aa1.42□□□□□ -2.18
CCDC54-201ENST00000261058 FBN3Q75N90 2809 aa1.41□□□□□ -2.18
CCDC54-201ENST00000261058 WNK1Q9H4A3 2382 aa1.41□□□□□ -2.18
CCDC54-201ENST00000261058 DEFB1P60022 68 aa1.4□□□□□ -2.19
CCDC54-201ENST00000261058 A0A0D9SG42 100 aa1.39□□□□□ -2.19
CCDC54-201ENST00000261058 HTN1P15515 57 aa1.39□□□□□ -2.19
CCDC54-201ENST00000261058 KRTAP4-1Q9BYQ7 146 aa1.39□□□□□ -2.19
CCDC54-201ENST00000261058 AKAP6Q13023 2319 aa1.37□□□□□ -2.19
CCDC54-201ENST00000261058 CSPG4Q6UVK1 2322 aa1.37□□□□□ -2.19
CCDC54-201ENST00000261058 DSPP15924 2871 aaKnown RBP1.36□□□□□ -2.19
CCDC54-201ENST00000261058 DEFB108BQ8NET1 73 aa1.36□□□□□ -2.19
CCDC54-201ENST00000261058 SPTBN1Q01082 2364 aaKnown RBP1.36□□□□□ -2.19
CCDC54-201ENST00000261058 M0QZ58 72 aa1.35□□□□□ -2.19
CCDC54-201ENST00000261058 DEFB110Q30KQ9 67 aa1.35□□□□□ -2.19
CCDC54-201ENST00000261058 SPTA1P02549 2419 aa1.34□□□□□ -2.19
CCDC54-201ENST00000261058 C2CD3Q4AC94 2353 aa1.34□□□□□ -2.19
CCDC54-201ENST00000261058 CHD7Q9P2D1 2997 aa1.32□□□□□ -2.2
CCDC54-201ENST00000261058 ACACAQ13085 2346 aa1.32□□□□□ -2.2
CCDC54-201ENST00000261058 ASH1LQ9NR48 2969 aaKnown RBP1.32□□□□□ -2.2
CCDC54-201ENST00000261058 A0A0C4DFX4 3053 aa1.32□□□□□ -2.2
CCDC54-201ENST00000261058 SPTBN2O15020 2390 aa1.32□□□□□ -2.2
CCDC54-201ENST00000261058 ABCA2Q9BZC7 2435 aa1.31□□□□□ -2.2
CCDC54-201ENST00000261058 CACNA1HO95180 2353 aa1.31□□□□□ -2.2
CCDC54-201ENST00000261058 REV3LO60673 3130 aa1.31□□□□□ -2.2
CCDC54-201ENST00000261058 TENM1Q9UKZ4 2725 aa1.31□□□□□ -2.2
CCDC54-201ENST00000261058 CELSR2Q9HCU4 2923 aa1.29□□□□□ -2.2
CCDC54-201ENST00000261058 DEFB136Q30KP8 78 aa1.29□□□□□ -2.2
CCDC54-201ENST00000261058 TENM2Q9NT68 2774 aa1.29□□□□□ -2.2
CCDC54-201ENST00000261058 MGAQ8IWI9 3026 aa1.28□□□□□ -2.2
CCDC54-201ENST00000261058 FCGBPQ9Y6R7 5405 aaPredicted RBP1.27□□□□□ -2.21
CCDC54-201ENST00000261058 SPTBN4Q9H254 2564 aa1.27□□□□□ -2.21
CCDC54-201ENST00000261058 TRANK1O15050 2925 aa1.26□□□□□ -2.21
CCDC54-201ENST00000261058 F8P00451 2351 aa1.26□□□□□ -2.21
CCDC54-201ENST00000261058 Q9Y3F1 56 aa1.26□□□□□ -2.21
CCDC54-201ENST00000261058 ABCA12Q86UK0 2595 aa1.26□□□□□ -2.21
CCDC54-201ENST00000261058 OTOGQ6ZRI0 2925 aa1.26□□□□□ -2.21
CCDC54-201ENST00000261058 A0A096LNI7 61 aa1.25□□□□□ -2.21
CCDC54-201ENST00000261058 SPINK6Q6UWN8 80 aa1.25□□□□□ -2.21
CCDC54-201ENST00000261058 UBR5O95071 2799 aaPredicted RBP1.25□□□□□ -2.21
CCDC54-201ENST00000261058 PKD1L2Q7Z442 2459 aa1.25□□□□□ -2.21
CCDC54-201ENST00000261058 KRTAP10-4P60372 401 aaPredicted RBP1.24□□□□□ -2.21
CCDC54-201ENST00000261058 PRRC2CQ9Y520 2896 aaKnown RBP1.24□□□□□ -2.21
CCDC54-201ENST00000261058 CEP290O15078 2479 aa1.24□□□□□ -2.21
CCDC54-201ENST00000261058 SRRM2Q9UQ35 2752 aaKnown RBP1.24□□□□□ -2.21
CCDC54-201ENST00000261058 GVINP1Q7Z2Y8 2422 aa1.23□□□□□ -2.21
CCDC54-201ENST00000261058 NCOR1O75376 2440 aa1.23□□□□□ -2.21
CCDC54-201ENST00000261058 MEGF8Q7Z7M0 2845 aa1.23□□□□□ -2.21
CCDC54-201ENST00000261058 EP300Q09472 2414 aaPredicted RBP1.22□□□□□ -2.21
CCDC54-201ENST00000261058 COL6A5A8TX70 2615 aa1.22□□□□□ -2.21
CCDC54-201ENST00000261058 DEFB124Q8NES8 71 aa1.22□□□□□ -2.21
CCDC54-201ENST00000261058 SPART-AS1P0CW21 52 aa1.21□□□□□ -2.22
CCDC54-201ENST00000261058 VWFP04275 2813 aa1.21□□□□□ -2.22
CCDC54-201ENST00000261058 APC2O95996 2303 aa1.21□□□□□ -2.22
CCDC54-201ENST00000261058 CEP250Q9BV73 2442 aa1.2□□□□□ -2.22
CCDC54-201ENST00000261058 TNP1P09430 55 aa1.2□□□□□ -2.22
CCDC54-201ENST00000261058 WDR87Q6ZQQ6 2873 aa1.2□□□□□ -2.22
CCDC54-201ENST00000261058 ZNF292O60281 2723 aa1.2□□□□□ -2.22
CCDC54-201ENST00000261058 CHD6Q8TD26 2715 aa1.19□□□□□ -2.22
CCDC54-201ENST00000261058 A0A096LPF7 62 aa1.19□□□□□ -2.22
CCDC54-201ENST00000261058 H3BNG1 76 aa1.19□□□□□ -2.22
CCDC54-201ENST00000261058 CD52P31358 61 aa1.19□□□□□ -2.22
CCDC54-201ENST00000261058 NAV2Q8IVL1 2488 aa1.19□□□□□ -2.22
CCDC54-201ENST00000261058 CCDC168Q8NDH2 2452 aa1.19□□□□□ -2.22
CCDC54-201ENST00000261058 DMBT1Q9UGM3 2413 aaPredicted RBP1.19□□□□□ -2.22
CCDC54-201ENST00000261058 DEFB135Q30KP9 77 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms