RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 FAM30AQ9NZY2 134 aa9.96□□□□□ -0.81
RFX1-201ENST00000254325 WFDC13Q8IUB5 93 aa9.96□□□□□ -0.82
RFX1-201ENST00000254325 NDUFS5O43920 106 aa9.96□□□□□ -0.82
RFX1-201ENST00000254325 BCE1O60756 84 aa9.94□□□□□ -0.82
RFX1-201ENST00000254325 PRO0628Q9UI54 55 aa9.94□□□□□ -0.82
RFX1-201ENST00000254325 NDUFB1O75438 58 aa9.93□□□□□ -0.82
RFX1-201ENST00000254325 RTL8CO15255 209 aa9.93□□□□□ -0.82
RFX1-201ENST00000254325 RPS28P62857 69 aaKnown RBP9.93□□□□□ -0.82
RFX1-201ENST00000254325 IGFL1Q6UW32 110 aa9.92□□□□□ -0.82
RFX1-201ENST00000254325 KRTAP4-16G5E9R7 235 aaPredicted RBP9.92□□□□□ -0.82
RFX1-201ENST00000254325 KRTAP7-1Q8IUC3 87 aa9.92□□□□□ -0.82
RFX1-201ENST00000254325 A0A087WTM6 91 aa9.91□□□□□ -0.82
RFX1-201ENST00000254325 ATP5EP56381 51 aaPredicted RBP9.91□□□□□ -0.82
RFX1-201ENST00000254325 ZNF706Q9Y5V0 76 aaPredicted RBP9.91□□□□□ -0.82
RFX1-201ENST00000254325 SMIM29Q86T20 159 aa9.9□□□□□ -0.82
RFX1-201ENST00000254325 IGKV4-1P06312 121 aa9.89□□□□□ -0.83
RFX1-201ENST00000254325 TMEM254Q8TBM7 123 aa9.89□□□□□ -0.83
RFX1-201ENST00000254325 HCG22E2RYF7 251 aa9.85□□□□□ -0.83
RFX1-201ENST00000254325 K7EQZ3 153 aa9.85□□□□□ -0.83
RFX1-201ENST00000254325 PSPHP1O15172 72 aa9.84□□□□□ -0.83
RFX1-201ENST00000254325 CYSTM1Q9H1C7 97 aa9.83□□□□□ -0.84
RFX1-201ENST00000254325 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.83□□□□□ -0.84
RFX1-201ENST00000254325 RPL37AP61513 92 aaKnown RBP9.81□□□□□ -0.84
RFX1-201ENST00000254325 SPRR4Q96PI1 79 aa9.81□□□□□ -0.84
RFX1-201ENST00000254325 CHKB-CPT1BH3BT56 60 aa9.8□□□□□ -0.84
RFX1-201ENST00000254325 PMAIP1Q13794 54 aa9.8□□□□□ -0.84
RFX1-201ENST00000254325 TNP2Q05952 138 aa9.8□□□□□ -0.84
RFX1-201ENST00000254325 A6NED7 52 aa9.79□□□□□ -0.84
RFX1-201ENST00000254325 CASC2Q6XLA1 102 aa9.79□□□□□ -0.84
RFX1-201ENST00000254325 MOBPQ13875 183 aa9.78□□□□□ -0.84
RFX1-201ENST00000254325 PANO1I0J062 215 aa9.78□□□□□ -0.84
RFX1-201ENST00000254325 SPINK6Q6UWN8 80 aa9.77□□□□□ -0.85
RFX1-201ENST00000254325 SPACA4Q8TDM5 124 aa9.76□□□□□ -0.85
RFX1-201ENST00000254325 KLKP1Q107X0 134 aa9.75□□□□□ -0.85
RFX1-201ENST00000254325 PSORS1C2Q9UIG4 136 aa9.75□□□□□ -0.85
RFX1-201ENST00000254325 KRTAP11-1Q8IUC1 163 aa9.75□□□□□ -0.85
RFX1-201ENST00000254325 OXTP01178 125 aa9.74□□□□□ -0.85
RFX1-201ENST00000254325 DSCR10P59022 87 aa9.74□□□□□ -0.85
RFX1-201ENST00000254325 LINC00208Q96KT6 92 aa9.74□□□□□ -0.85
RFX1-201ENST00000254325 CIRBP-AS1Q8TBR5 109 aa9.74□□□□□ -0.85
RFX1-201ENST00000254325 Q6ZRN7 208 aaPredicted RBP9.73□□□□□ -0.85
RFX1-201ENST00000254325 WWC2-AS2Q96NR7 200 aa9.73□□□□□ -0.85
RFX1-201ENST00000254325 H7BZZ5 65 aa9.72□□□□□ -0.85
RFX1-201ENST00000254325 TENM2Q9NT68 2774 aa9.72□□□□□ -0.85
RFX1-201ENST00000254325 ANAPC11Q9NYG5 84 aa9.71□□□□□ -0.85
RFX1-201ENST00000254325 IGHV6-1A0A0B4J1U7 121 aa9.7□□□□□ -0.86
RFX1-201ENST00000254325 Q5XG85 94 aa9.7□□□□□ -0.86
RFX1-201ENST00000254325 ZNF861PO60384 105 aa9.7□□□□□ -0.86
RFX1-201ENST00000254325 OCR1Q9BZK8 76 aa9.69□□□□□ -0.86
RFX1-201ENST00000254325 IGLV8-61A0A075B6I0 122 aa9.68□□□□□ -0.86
RFX1-201ENST00000254325 A8MWP4 228 aa9.68□□□□□ -0.86
RFX1-201ENST00000254325 SPRR1BP22528 89 aa9.68□□□□□ -0.86
RFX1-201ENST00000254325 PRR15LQ9BU68 103 aa9.67□□□□□ -0.86
RFX1-201ENST00000254325 H0Y9P7 68 aa9.65□□□□□ -0.86
RFX1-201ENST00000254325 PRR15Q8IV56 129 aa9.65□□□□□ -0.86
RFX1-201ENST00000254325 Q6ZR54 194 aa9.64□□□□□ -0.87
RFX1-201ENST00000254325 C4orf48Q5BLP8 95 aa9.63□□□□□ -0.87
RFX1-201ENST00000254325 hDV103S1A0JD37 113 aa9.63□□□□□ -0.87
RFX1-201ENST00000254325 PLAC8Q9NZF1 115 aa9.62□□□□□ -0.87
RFX1-201ENST00000254325 IGLV7-43P04211 117 aa9.61□□□□□ -0.87
RFX1-201ENST00000254325 PCOTHQ58A44 107 aa9.56□□□□□ -0.88
RFX1-201ENST00000254325 C1orf64Q8NEQ6 169 aa9.56□□□□□ -0.88
RFX1-201ENST00000254325 HUWE1Q7Z6Z7 4374 aaKnown RBP9.55□□□□□ -0.88
RFX1-201ENST00000254325 LINC00472Q9H8W2 130 aa9.54□□□□□ -0.88
RFX1-201ENST00000254325 TRAV22A0A0B4J277 110 aa9.52□□□□□ -0.89
RFX1-201ENST00000254325 KRTAP13-1Q8IUC0 172 aa9.51□□□□□ -0.89
RFX1-201ENST00000254325 C8orf17Q9NRJ1 99 aa9.5□□□□□ -0.89
RFX1-201ENST00000254325 KRTAP10-2P60368 255 aa9.5□□□□□ -0.89
RFX1-201ENST00000254325 A0A1B0GVX0 72 aa9.49□□□□□ -0.89
RFX1-201ENST00000254325 TP53AIP1Q9HCN2 124 aa9.49□□□□□ -0.89
RFX1-201ENST00000254325 TGP01266 2768 aa9.47□□□□□ -0.89
RFX1-201ENST00000254325 H3BPC8 53 aa9.47□□□□□ -0.89
RFX1-201ENST00000254325 SSBP3-AS1Q7Z2R9 100 aa9.47□□□□□ -0.89
RFX1-201ENST00000254325 LINC00483Q53H64 154 aa9.47□□□□□ -0.89
RFX1-201ENST00000254325 A8MUN3 132 aa9.45□□□□□ -0.9
RFX1-201ENST00000254325 FP248Q71RG6 208 aaPredicted RBP9.45□□□□□ -0.9
RFX1-201ENST00000254325 MRPL34Q9BQ48 92 aaKnown RBP9.44□□□□□ -0.9
RFX1-201ENST00000254325 MMP24-AS1A0A0U1RRL7 71 aa9.43□□□□□ -0.9
RFX1-201ENST00000254325 LIMD2Q9BT23 127 aa9.42□□□□□ -0.9
RFX1-201ENST00000254325 ANK2Q01484 3957 aa9.41□□□□□ -0.9
RFX1-201ENST00000254325 RETNLBQ9BQ08 111 aa9.41□□□□□ -0.9
RFX1-201ENST00000254325 COL7A1Q02388 2944 aa9.41□□□□□ -0.9
RFX1-201ENST00000254325 KRTAP10-1P60331 282 aa9.4□□□□□ -0.9
RFX1-201ENST00000254325 PLA2G1BP04054 148 aaKnown RBP9.39□□□□□ -0.91
RFX1-201ENST00000254325 KRTAP29-1A8MX34 341 aaPredicted RBP9.38□□□□□ -0.91
RFX1-201ENST00000254325 SPAG11AQ6PDA7 123 aa9.37□□□□□ -0.91
RFX1-201ENST00000254325 TYMSOSQ8TAI1 123 aa9.37□□□□□ -0.91
RFX1-201ENST00000254325 LINC00313P59037 77 aa9.36□□□□□ -0.91
RFX1-201ENST00000254325 SRRM2Q9UQ35 2752 aaKnown RBP9.36□□□□□ -0.91
RFX1-201ENST00000254325 FAM229BQ4G0N7 80 aa9.34□□□□□ -0.91
RFX1-201ENST00000254325 CMYA5Q8N3K9 4069 aa9.33□□□□□ -0.92
RFX1-201ENST00000254325 DNAH9Q9NYC9 4486 aa9.33□□□□□ -0.92
RFX1-201ENST00000254325 SMR3BP02814 79 aaPredicted RBP9.33□□□□□ -0.92
RFX1-201ENST00000254325 CD164Q04900 197 aa9.33□□□□□ -0.92
RFX1-201ENST00000254325 C8orf87E5RJ46 101 aa9.32□□□□□ -0.92
RFX1-201ENST00000254325 DNAH3Q8TD57 4116 aa9.3□□□□□ -0.92
RFX1-201ENST00000254325 LCE6AA0A183 80 aa9.29□□□□□ -0.92
RFX1-201ENST00000254325 ZCCHC13Q8WW36 166 aaKnown RBP9.29□□□□□ -0.92
RFX1-201ENST00000254325 Q96NJ1 140 aa9.28□□□□□ -0.92
RFX1-201ENST00000254325 A0A087X002 238 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms