RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 C1orf64Q8NEQ6 169 aa7.67□□□□□ -1.18
USHBP1-201ENST00000252597 HCG22E2RYF7 251 aa7.66□□□□□ -1.18
USHBP1-201ENST00000252597 MP68P56378 58 aa7.66□□□□□ -1.18
USHBP1-201ENST00000252597 ATP5EP56381 51 aaPredicted RBP7.66□□□□□ -1.18
USHBP1-201ENST00000252597 IGLV5-48A0A075B6I7 105 aa7.65□□□□□ -1.18
USHBP1-201ENST00000252597 TGP01266 2768 aa7.65□□□□□ -1.19
USHBP1-201ENST00000252597 IGFL1Q6UW32 110 aa7.64□□□□□ -1.19
USHBP1-201ENST00000252597 PHF5AQ7RTV0 110 aaKnown RBP7.63□□□□□ -1.19
USHBP1-201ENST00000252597 NDUFS5O43920 106 aa7.63□□□□□ -1.19
USHBP1-201ENST00000252597 KRTAP7-1Q8IUC3 87 aa7.62□□□□□ -1.19
USHBP1-201ENST00000252597 IGLV9-49A0A0B4J1Y8 123 aa7.62□□□□□ -1.19
USHBP1-201ENST00000252597 PCOTHQ58A44 107 aa7.62□□□□□ -1.19
USHBP1-201ENST00000252597 DNAH10OSP0CZ25 163 aa7.6□□□□□ -1.19
USHBP1-201ENST00000252597 SPTSSBQ8NFR3 76 aa7.6□□□□□ -1.19
USHBP1-201ENST00000252597 A8MUN3 132 aa7.6□□□□□ -1.19
USHBP1-201ENST00000252597 H3BNG1 76 aa7.6□□□□□ -1.19
USHBP1-201ENST00000252597 CASC2Q6XLA1 102 aa7.58□□□□□ -1.2
USHBP1-201ENST00000252597 H0Y9P7 68 aa7.58□□□□□ -1.2
USHBP1-201ENST00000252597 hDV103S1A0JD37 113 aa7.57□□□□□ -1.2
USHBP1-201ENST00000252597 CMYA5Q8N3K9 4069 aa7.55□□□□□ -1.2
USHBP1-201ENST00000252597 KRTAP4-16G5E9R7 235 aaPredicted RBP7.55□□□□□ -1.2
USHBP1-201ENST00000252597 CHKB-CPT1BH3BT56 60 aa7.55□□□□□ -1.2
USHBP1-201ENST00000252597 LYSTQ99698 3801 aa7.54□□□□□ -1.2
USHBP1-201ENST00000252597 TRAV22A0A0B4J277 110 aa7.54□□□□□ -1.2
USHBP1-201ENST00000252597 A8MU10 97 aa7.54□□□□□ -1.2
USHBP1-201ENST00000252597 TNP2Q05952 138 aa7.53□□□□□ -1.2
USHBP1-201ENST00000252597 PRR15LQ9BU68 103 aa7.53□□□□□ -1.2
USHBP1-201ENST00000252597 KRTAP1-5Q9BYS1 174 aa7.53□□□□□ -1.2
USHBP1-201ENST00000252597 SPINK6Q6UWN8 80 aa7.52□□□□□ -1.21
USHBP1-201ENST00000252597 SPRR4Q96PI1 79 aa7.52□□□□□ -1.21
USHBP1-201ENST00000252597 B9D2Q9BPU9 175 aa7.52□□□□□ -1.21
USHBP1-201ENST00000252597 SPRR1AP35321 89 aa7.52□□□□□ -1.21
USHBP1-201ENST00000252597 ANAPC11Q9NYG5 84 aa7.52□□□□□ -1.21
USHBP1-201ENST00000252597 KRTAP11-1Q8IUC1 163 aa7.51□□□□□ -1.21
USHBP1-201ENST00000252597 TLX1NBP0CAT3 122 aa7.51□□□□□ -1.21
USHBP1-201ENST00000252597 IGHV6-1A0A0B4J1U7 121 aa7.49□□□□□ -1.21
USHBP1-201ENST00000252597 NDUFB1O75438 58 aa7.49□□□□□ -1.21
USHBP1-201ENST00000252597 PMAIP1Q13794 54 aa7.48□□□□□ -1.21
USHBP1-201ENST00000252597 C16orf90A8MZG2 172 aa7.47□□□□□ -1.21
USHBP1-201ENST00000252597 A6NED7 52 aa7.47□□□□□ -1.21
USHBP1-201ENST00000252597 CDK2AP2O75956 126 aa7.47□□□□□ -1.21
USHBP1-201ENST00000252597 PLA2G2DQ9UNK4 145 aa7.46□□□□□ -1.21
USHBP1-201ENST00000252597 PRR15Q8IV56 129 aa7.46□□□□□ -1.22
USHBP1-201ENST00000252597 DNAH10Q8IVF4 4471 aa7.45□□□□□ -1.22
USHBP1-201ENST00000252597 K7EIL1 84 aa7.45□□□□□ -1.22
USHBP1-201ENST00000252597 SPAG11AQ6PDA7 123 aa7.45□□□□□ -1.22
USHBP1-201ENST00000252597 CNBPP62633 177 aaKnown RBP7.44□□□□□ -1.22
USHBP1-201ENST00000252597 RETNLBQ9BQ08 111 aa7.44□□□□□ -1.22
USHBP1-201ENST00000252597 IGLV5-37A0A075B6J1 123 aa7.43□□□□□ -1.22
USHBP1-201ENST00000252597 PANO1I0J062 215 aa7.42□□□□□ -1.22
USHBP1-201ENST00000252597 ZCCHC13Q8WW36 166 aaKnown RBP7.42□□□□□ -1.22
USHBP1-201ENST00000252597 A0A1B0GW54 56 aa7.42□□□□□ -1.22
USHBP1-201ENST00000252597 A8MWP4 228 aa7.41□□□□□ -1.22
USHBP1-201ENST00000252597 DNAH3Q8TD57 4116 aa7.41□□□□□ -1.22
USHBP1-201ENST00000252597 MOBPQ13875 183 aa7.39□□□□□ -1.23
USHBP1-201ENST00000252597 Q1T7F1 81 aa7.38□□□□□ -1.23
USHBP1-201ENST00000252597 COA5Q86WW8 74 aa7.38□□□□□ -1.23
USHBP1-201ENST00000252597 LCE6AA0A183 80 aa7.34□□□□□ -1.23
USHBP1-201ENST00000252597 Q5VV11 94 aa7.34□□□□□ -1.23
USHBP1-201ENST00000252597 CIRBP-AS1Q8TBR5 109 aa7.34□□□□□ -1.23
USHBP1-201ENST00000252597 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.34□□□□□ -1.23
USHBP1-201ENST00000252597 KRTAP29-1A8MX34 341 aaPredicted RBP7.34□□□□□ -1.24
USHBP1-201ENST00000252597 CYP4F30PQ9H0H9 118 aa7.34□□□□□ -1.24
USHBP1-201ENST00000252597 LINC00472Q9H8W2 130 aa7.34□□□□□ -1.24
USHBP1-201ENST00000252597 HUWE1Q7Z6Z7 4374 aaKnown RBP7.33□□□□□ -1.24
USHBP1-201ENST00000252597 C14orf177Q52M58 125 aa7.33□□□□□ -1.24
USHBP1-201ENST00000252597 Q8N9P0 234 aaPredicted RBP7.33□□□□□ -1.24
USHBP1-201ENST00000252597 MMP24-AS1A0A0U1RRL7 71 aa7.32□□□□□ -1.24
USHBP1-201ENST00000252597 DNHD1Q96M86 4753 aa7.31□□□□□ -1.24
USHBP1-201ENST00000252597 FBN3Q75N90 2809 aa7.31□□□□□ -1.24
USHBP1-201ENST00000252597 C9orf163Q8N9P6 203 aa7.3□□□□□ -1.24
USHBP1-201ENST00000252597 A0A087X002 238 aa7.3□□□□□ -1.24
USHBP1-201ENST00000252597 CD164Q04900 197 aa7.3□□□□□ -1.24
USHBP1-201ENST00000252597 NOTCH2NLQ7Z3S9 236 aa7.3□□□□□ -1.24
USHBP1-201ENST00000252597 LIMD2Q9BT23 127 aa7.29□□□□□ -1.24
USHBP1-201ENST00000252597 PRR26Q8N8Z3 221 aa7.28□□□□□ -1.24
USHBP1-201ENST00000252597 C8orf17Q9NRJ1 99 aa7.28□□□□□ -1.24
USHBP1-201ENST00000252597 NBDYA0A0U1RRE5 68 aa7.27□□□□□ -1.25
USHBP1-201ENST00000252597 IGLV8-61A0A075B6I0 122 aa7.26□□□□□ -1.25
USHBP1-201ENST00000252597 APLNQ9ULZ1 77 aa7.25□□□□□ -1.25
USHBP1-201ENST00000252597 PSORS1C2Q9UIG4 136 aa7.24□□□□□ -1.25
USHBP1-201ENST00000252597 MEGF8Q7Z7M0 2845 aa7.24□□□□□ -1.25
USHBP1-201ENST00000252597 LCA10Q71F78 164 aa7.22□□□□□ -1.25
USHBP1-201ENST00000252597 C4orf48Q5BLP8 95 aa7.22□□□□□ -1.25
USHBP1-201ENST00000252597 SPANXA2-OT1Q8N9U9 137 aa7.22□□□□□ -1.25
USHBP1-201ENST00000252597 H3BPC8 53 aa7.22□□□□□ -1.25
USHBP1-201ENST00000252597 A0A1B0GVX0 72 aa7.21□□□□□ -1.25
USHBP1-201ENST00000252597 MRPL34Q9BQ48 92 aaKnown RBP7.21□□□□□ -1.25
USHBP1-201ENST00000252597 DNAH7Q8WXX0 4024 aa7.21□□□□□ -1.25
USHBP1-201ENST00000252597 DNAH9Q9NYC9 4486 aa7.21□□□□□ -1.26
USHBP1-201ENST00000252597 IGLV7-46A0A075B6I9 117 aa7.2□□□□□ -1.26
USHBP1-201ENST00000252597 SPINK7P58062 85 aa7.2□□□□□ -1.26
USHBP1-201ENST00000252597 LOC101927531A0A1B0GV80 90 aa7.19□□□□□ -1.26
USHBP1-201ENST00000252597 RTL8CO15255 209 aa7.19□□□□□ -1.26
USHBP1-201ENST00000252597 LY6G6CO95867 125 aa7.18□□□□□ -1.26
USHBP1-201ENST00000252597 HRES1P13985 223 aa7.18□□□□□ -1.26
USHBP1-201ENST00000252597 SPRR1BP22528 89 aa7.18□□□□□ -1.26
USHBP1-201ENST00000252597 TP53AIP1Q9HCN2 124 aa7.17□□□□□ -1.26
USHBP1-201ENST00000252597 PLECQ15149 4684 aaKnown RBP7.17□□□□□ -1.26
USHBP1-201ENST00000252597 IGLV5-52A0A0A0MRZ9 124 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms