RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 ETDCA0A1B0GVM5 59 aa5.76□□□□□ -1.49
VPS50-201ENST00000251739 H3BMG7 143 aa5.76□□□□□ -1.49
VPS50-201ENST00000251739 ERC2-IT1O76042 136 aa5.76□□□□□ -1.49
VPS50-201ENST00000251739 IFITM1P13164 125 aa5.76□□□□□ -1.49
VPS50-201ENST00000251739 TSPEAR-AS2P59090 65 aa5.76□□□□□ -1.49
VPS50-201ENST00000251739 MEIG1Q5JSS6 88 aa5.76□□□□□ -1.49
VPS50-201ENST00000251739 Q8N377 158 aa5.76□□□□□ -1.49
VPS50-201ENST00000251739 NDUFA12Q9UI09 145 aa5.76□□□□□ -1.49
VPS50-201ENST00000251739 Q9BRP9 147 aa5.75□□□□□ -1.49
VPS50-201ENST00000251739 TRBV10-2A0A0K0K1G8 114 aa5.74□□□□□ -1.49
VPS50-201ENST00000251739 SNCGO76070 127 aa5.74□□□□□ -1.49
VPS50-201ENST00000251739 Q6ZRX8 168 aa5.74□□□□□ -1.49
VPS50-201ENST00000251739 RAB37Q96AX2 223 aa5.74□□□□□ -1.49
VPS50-201ENST00000251739 MYMXA0A1B0GTQ4 84 aa5.73□□□□□ -1.49
VPS50-201ENST00000251739 SYS1-DBNDD2H3BUS1 97 aa5.73□□□□□ -1.49
VPS50-201ENST00000251739 NDUFV3P56181 108 aaKnown RBP5.73□□□□□ -1.49
VPS50-201ENST00000251739 SEC61BP60468 96 aaKnown RBP5.73□□□□□ -1.49
VPS50-201ENST00000251739 MOBPQ13875 183 aa5.73□□□□□ -1.49
VPS50-201ENST00000251739 TAL2Q16559 108 aa5.73□□□□□ -1.49
VPS50-201ENST00000251739 GAGE2AQ6NT46 116 aa5.73□□□□□ -1.49
VPS50-201ENST00000251739 Q6ZVH6 145 aa5.73□□□□□ -1.49
VPS50-201ENST00000251739 SSBP3-AS1Q7Z2R9 100 aa5.73□□□□□ -1.49
VPS50-201ENST00000251739 FAM19A2Q8N3H0 131 aa5.73□□□□□ -1.49
VPS50-201ENST00000251739 PPDPFLQ8WWR9 84 aa5.73□□□□□ -1.49
VPS50-201ENST00000251739 HIGD1BQ9P298 99 aa5.73□□□□□ -1.49
VPS50-201ENST00000251739 LEPROTL1O95214 131 aa5.72□□□□□ -1.49
VPS50-201ENST00000251739 IGLV6-57P01721 117 aa5.72□□□□□ -1.49
VPS50-201ENST00000251739 IGLV9-49A0A0B4J1Y8 123 aa5.71□□□□□ -1.5
VPS50-201ENST00000251739 LEPROTO15243 131 aa5.7□□□□□ -1.5
VPS50-201ENST00000251739 SLC25A20O43772 301 aa5.7□□□□□ -1.5
VPS50-201ENST00000251739 NDUFC2O95298 119 aa5.7□□□□□ -1.5
VPS50-201ENST00000251739 LINC01547P58512 204 aaPredicted RBP5.7□□□□□ -1.5
VPS50-201ENST00000251739 A0A1B0GWB2 263 aa5.69□□□□□ -1.5
VPS50-201ENST00000251739 J3QQQ9 107 aa5.69□□□□□ -1.5
VPS50-201ENST00000251739 KRTAP19-2Q3LHN2 52 aa5.69□□□□□ -1.5
VPS50-201ENST00000251739 TRBV20-1A0A075B6N2 111 aa5.68□□□□□ -1.5
VPS50-201ENST00000251739 E9PLD3 99 aa5.68□□□□□ -1.5
VPS50-201ENST00000251739 PLNP26678 52 aa5.68□□□□□ -1.5
VPS50-201ENST00000251739 NMUP48645 174 aa5.68□□□□□ -1.5
VPS50-201ENST00000251739 LINC01545Q5VT33 79 aa5.68□□□□□ -1.5
VPS50-201ENST00000251739 SOSTDC1Q6X4U4 206 aa5.68□□□□□ -1.5
VPS50-201ENST00000251739 IMUPQ9GZP8 106 aa5.68□□□□□ -1.5
VPS50-201ENST00000251739 TRAV23DV6A0A075B6W5 121 aa5.67□□□□□ -1.5
VPS50-201ENST00000251739 ETDBQ3ZM63 59 aa5.67□□□□□ -1.5
VPS50-201ENST00000251739 FSIP2Q5CZC0 6907 aa5.67□□□□□ -1.5
VPS50-201ENST00000251739 C9JAW5 83 aa5.66□□□□□ -1.5
VPS50-201ENST00000251739 ZNF73O43830 326 aaPredicted RBP5.66□□□□□ -1.5
VPS50-201ENST00000251739 ATOH7Q8N100 152 aa5.66□□□□□ -1.5
VPS50-201ENST00000251739 DPM2O94777 84 aa5.65□□□□□ -1.5
VPS50-201ENST00000251739 SCGB1C2P0DMR2 95 aa5.65□□□□□ -1.5
VPS50-201ENST00000251739 SPRR1BP22528 89 aa5.65□□□□□ -1.5
VPS50-201ENST00000251739 SEC61GP60059 68 aa5.65□□□□□ -1.5
VPS50-201ENST00000251739 ADAMTSL4-AS1Q5T5F5 129 aa5.65□□□□□ -1.5
VPS50-201ENST00000251739 TEN1Q86WV5 123 aa5.65□□□□□ -1.5
VPS50-201ENST00000251739 ST20-AS1Q8NBB2 130 aa5.65□□□□□ -1.5
VPS50-201ENST00000251739 PRO0628Q9UI54 55 aa5.65□□□□□ -1.5
VPS50-201ENST00000251739 S100A7L2Q5SY68 101 aa5.64□□□□□ -1.51
VPS50-201ENST00000251739 C2orf91Q6ZV80 131 aa5.64□□□□□ -1.51
VPS50-201ENST00000251739 A0A0J9YXY3 114 aa5.63□□□□□ -1.51
VPS50-201ENST00000251739 UQCRQO14949 82 aa5.63□□□□□ -1.51
VPS50-201ENST00000251739 IGKCP01834 107 aa5.63□□□□□ -1.51
VPS50-201ENST00000251739 MT-ATP8P03928 68 aa5.63□□□□□ -1.51
VPS50-201ENST00000251739 LGALS3P17931 250 aaKnown RBP5.63□□□□□ -1.51
VPS50-201ENST00000251739 HERVK_113P61574 105 aa5.63□□□□□ -1.51
VPS50-201ENST00000251739 C9orf153Q5TBE3 101 aa5.63□□□□□ -1.51
VPS50-201ENST00000251739 COPS9Q8WXC6 57 aa5.63□□□□□ -1.51
VPS50-201ENST00000251739 LITAFQ99732 161 aa5.63□□□□□ -1.51
VPS50-201ENST00000251739 V9GYY9 64 aa5.63□□□□□ -1.51
VPS50-201ENST00000251739 ACYP1P07311 99 aa5.61□□□□□ -1.51
VPS50-201ENST00000251739 NPC2P61916 151 aa5.61□□□□□ -1.51
VPS50-201ENST00000251739 MT1HP80294 61 aa5.61□□□□□ -1.51
VPS50-201ENST00000251739 CRCT1Q9UGL9 99 aa5.61□□□□□ -1.51
VPS50-201ENST00000251739 TMEM258P61165 79 aa5.6□□□□□ -1.51
VPS50-201ENST00000251739 CEND1Q8N111 149 aa5.6□□□□□ -1.51
VPS50-201ENST00000251739 FLGP20930 4061 aaPredicted RBP5.59□□□□□ -1.51
VPS50-201ENST00000251739 FAM240AA0A1B0GVK7 77 aa5.59□□□□□ -1.51
VPS50-201ENST00000251739 CCDC179H3BU77 68 aa5.59□□□□□ -1.51
VPS50-201ENST00000251739 LINC00308Q8TCZ7 52 aa5.59□□□□□ -1.51
VPS50-201ENST00000251739 LIMD2Q9BT23 127 aa5.59□□□□□ -1.51
VPS50-201ENST00000251739 PRO0461Q9UI25 63 aa5.59□□□□□ -1.51
VPS50-201ENST00000251739 TIMM17BO60830 172 aa5.58□□□□□ -1.52
VPS50-201ENST00000251739 PCOTHQ58A44 107 aa5.58□□□□□ -1.52
VPS50-201ENST00000251739 DHRS4-AS1Q9P1J3 65 aa5.58□□□□□ -1.52
VPS50-201ENST00000251739 ELOF1P60002 83 aaKnown RBP5.57□□□□□ -1.52
VPS50-201ENST00000251739 CD164Q04900 197 aa5.57□□□□□ -1.52
VPS50-201ENST00000251739 LAMTOR3Q9UHA4 124 aa5.57□□□□□ -1.52
VPS50-201ENST00000251739 Q5XG85 94 aa5.56□□□□□ -1.52
VPS50-201ENST00000251739 NHP2Q9NX24 153 aaKnown RBP5.56□□□□□ -1.52
VPS50-201ENST00000251739 IGLV8-61A0A075B6I0 122 aa5.55□□□□□ -1.52
VPS50-201ENST00000251739 TRBV7-7A0A0K0K1E9 115 aa5.55□□□□□ -1.52
VPS50-201ENST00000251739 C9orf92A6NGG3 77 aa5.55□□□□□ -1.52
VPS50-201ENST00000251739 TRACP01848 142 aa5.55□□□□□ -1.52
VPS50-201ENST00000251739 CFC1BP0CG36 223 aa5.54□□□□□ -1.52
VPS50-201ENST00000251739 HRCT1Q6UXD1 115 aa5.54□□□□□ -1.52
VPS50-201ENST00000251739 COX7BP24311 80 aa5.53□□□□□ -1.52
VPS50-201ENST00000251739 C6orf99Q4VX62 202 aa5.53□□□□□ -1.52
VPS50-201ENST00000251739 SMIM29Q86T20 159 aa5.53□□□□□ -1.52
VPS50-201ENST00000251739 HIST1H4GQ99525 98 aa5.53□□□□□ -1.52
VPS50-201ENST00000251739 TTTY13Q9BZ97 58 aa5.53□□□□□ -1.52
VPS50-201ENST00000251739 IGLV5-48A0A075B6I7 105 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms