RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 H0YGX0 51 aa13.73□□□□□ -0.21
SDF2L1-201ENST00000248958 HSD52Q0P140 79 aa13.73□□□□□ -0.21
SDF2L1-201ENST00000248958 PRO1854Q9UHT4 67 aa13.73□□□□□ -0.21
SDF2L1-201ENST00000248958 F8WEM9 126 aa13.72□□□□□ -0.21
SDF2L1-201ENST00000248958 PPDPFLQ8WWR9 84 aa13.72□□□□□ -0.21
SDF2L1-201ENST00000248958 UQCR10Q9UDW1 63 aa13.72□□□□□ -0.21
SDF2L1-201ENST00000248958 FXYD2P54710 66 aa13.71□□□□□ -0.21
SDF2L1-201ENST00000248958 HRCT1Q6UXD1 115 aa13.71□□□□□ -0.21
SDF2L1-201ENST00000248958 OCIAD2Q56VL3 154 aa13.66□□□□□ -0.22
SDF2L1-201ENST00000248958 KRTAP13-3Q3SY46 172 aa13.65□□□□□ -0.22
SDF2L1-201ENST00000248958 Q5XG85 94 aa13.64□□□□□ -0.23
SDF2L1-201ENST00000248958 A0A1B0GX51 115 aa13.63□□□□□ -0.23
SDF2L1-201ENST00000248958 IGLV8-61A0A075B6I0 122 aa13.62□□□□□ -0.23
SDF2L1-201ENST00000248958 Q6JHZ5 121 aa13.62□□□□□ -0.23
SDF2L1-201ENST00000248958 SNHG12Q9BXW3 62 aa13.61□□□□□ -0.23
SDF2L1-201ENST00000248958 GHRHP01286 108 aa13.6□□□□□ -0.23
SDF2L1-201ENST00000248958 FAM218AQ96MZ4 157 aa13.58□□□□□ -0.24
SDF2L1-201ENST00000248958 A0A0G2JQZ4 141 aa13.56□□□□□ -0.24
SDF2L1-201ENST00000248958 TRIAP1O43715 76 aa13.56□□□□□ -0.24
SDF2L1-201ENST00000248958 CLEC2BQ92478 149 aa13.56□□□□□ -0.24
SDF2L1-201ENST00000248958 TCL1BO95988 128 aa13.53□□□□□ -0.24
SDF2L1-201ENST00000248958 COX6CP09669 75 aa13.53□□□□□ -0.24
SDF2L1-201ENST00000248958 PSMB2P49721 201 aa13.52□□□□□ -0.25
SDF2L1-201ENST00000248958 IGFL1Q6UW32 110 aa13.52□□□□□ -0.25
SDF2L1-201ENST00000248958 K7ERJ3 54 aa13.51□□□□□ -0.25
SDF2L1-201ENST00000248958 SMIM6P0DI80 62 aa13.5□□□□□ -0.25
SDF2L1-201ENST00000248958 NDUFV3P56181 108 aaKnown RBP13.47□□□□□ -0.25
SDF2L1-201ENST00000248958 C1orf195Q5TG92 126 aa13.47□□□□□ -0.25
SDF2L1-201ENST00000248958 TRBV7-7A0A0K0K1E9 115 aa13.46□□□□□ -0.25
SDF2L1-201ENST00000248958 H3BQ85 93 aa13.46□□□□□ -0.25
SDF2L1-201ENST00000248958 DNAL4O96015 105 aa13.46□□□□□ -0.25
SDF2L1-201ENST00000248958 ASB16-AS1Q495Z4 193 aa13.44□□□□□ -0.26
SDF2L1-201ENST00000248958 A0A0U1RQV1 116 aa13.43□□□□□ -0.26
SDF2L1-201ENST00000248958 H3BUT2 72 aa13.43□□□□□ -0.26
SDF2L1-201ENST00000248958 MUC2Q02817 5179 aa13.43□□□□□ -0.26
SDF2L1-201ENST00000248958 FABP2P12104 132 aa13.42□□□□□ -0.26
SDF2L1-201ENST00000248958 SEC61BP60468 96 aaKnown RBP13.42□□□□□ -0.26
SDF2L1-201ENST00000248958 XP32Q5T750 250 aa13.42□□□□□ -0.26
SDF2L1-201ENST00000248958 MUC17Q685J3 4493 aa13.42□□□□□ -0.26
SDF2L1-201ENST00000248958 ORMDL1Q9P0S3 153 aa13.41□□□□□ -0.26
SDF2L1-201ENST00000248958 M0R143 59 aa13.4□□□□□ -0.26
SDF2L1-201ENST00000248958 H3BMG7 143 aa13.38□□□□□ -0.27
SDF2L1-201ENST00000248958 Q6Q795 121 aa13.38□□□□□ -0.27
SDF2L1-201ENST00000248958 TMEM256-PLSCR3K7ERE1 68 aa13.36□□□□□ -0.27
SDF2L1-201ENST00000248958 SCGB1C2P0DMR2 95 aa13.36□□□□□ -0.27
SDF2L1-201ENST00000248958 TEN1Q86WV5 123 aa13.36□□□□□ -0.27
SDF2L1-201ENST00000248958 C9orf92A6NGG3 77 aa13.33□□□□□ -0.28
SDF2L1-201ENST00000248958 TRACP01848 142 aa13.33□□□□□ -0.28
SDF2L1-201ENST00000248958 SS18L2Q9UHA2 77 aa13.33□□□□□ -0.28
SDF2L1-201ENST00000248958 TSTD3H0UI37 97 aa13.32□□□□□ -0.28
SDF2L1-201ENST00000248958 LOC105371267A0A1B0GV96 52 aa13.29□□□□□ -0.28
SDF2L1-201ENST00000248958 LST1O00453 97 aa13.29□□□□□ -0.28
SDF2L1-201ENST00000248958 UBE2V1Q13404 147 aa13.27□□□□□ -0.29
SDF2L1-201ENST00000248958 ANKRD29Q8N6D5 301 aa13.26□□□□□ -0.29
SDF2L1-201ENST00000248958 A0A087WSZ3 146 aa13.22□□□□□ -0.29
SDF2L1-201ENST00000248958 A0A1W2PNM2 257 aa13.19□□□□□ -0.3
SDF2L1-201ENST00000248958 TRBV7-4A0A0J9YYF1 115 aa13.18□□□□□ -0.3
SDF2L1-201ENST00000248958 ATXN8Q156A1 80 aa13.16□□□□□ -0.3
SDF2L1-201ENST00000248958 A0A1B0GV72 72 aa13.15□□□□□ -0.3
SDF2L1-201ENST00000248958 BAALC-AS2P0C853 105 aa13.14□□□□□ -0.31
SDF2L1-201ENST00000248958 LYRM7Q5U5X0 104 aa13.14□□□□□ -0.31
SDF2L1-201ENST00000248958 RPL37P61927 97 aaKnown RBP13.13□□□□□ -0.31
SDF2L1-201ENST00000248958 RBM3P98179 157 aaKnown RBP13.13□□□□□ -0.31
SDF2L1-201ENST00000248958 PCOTHQ58A44 107 aa13.13□□□□□ -0.31
SDF2L1-201ENST00000248958 KRTAP4-1Q9BYQ7 146 aa13.13□□□□□ -0.31
SDF2L1-201ENST00000248958 NAA38Q9BRA0 125 aaKnown RBP13.12□□□□□ -0.31
SDF2L1-201ENST00000248958 CCKP06307 115 aa13.11□□□□□ -0.31
SDF2L1-201ENST00000248958 BATFQ16520 125 aa13.1□□□□□ -0.31
SDF2L1-201ENST00000248958 DSCR8Q96T75 97 aa13.1□□□□□ -0.31
SDF2L1-201ENST00000248958 KRTAP9-2Q9BYQ4 174 aa13.09□□□□□ -0.31
SDF2L1-201ENST00000248958 FAT4Q6V0I7 4981 aa13.09□□□□□ -0.31
SDF2L1-201ENST00000248958 LCE2AQ5TA79 106 aaPredicted RBP13.08□□□□□ -0.32
SDF2L1-201ENST00000248958 Q96NJ1 140 aa13.08□□□□□ -0.32
SDF2L1-201ENST00000248958 TRBV20-1A0A075B6N2 111 aa13.06□□□□□ -0.32
SDF2L1-201ENST00000248958 OBSCN-AS1Q96MR7 158 aa13.05□□□□□ -0.32
SDF2L1-201ENST00000248958 JMJD7-PLA2G4BH0Y9G9 81 aa13.03□□□□□ -0.32
SDF2L1-201ENST00000248958 C21orf62-AS1Q17RA5 79 aa13.03□□□□□ -0.32
SDF2L1-201ENST00000248958 C9JAW5 83 aa13.02□□□□□ -0.33
SDF2L1-201ENST00000248958 Q75L30 129 aa13□□□□□ -0.33
SDF2L1-201ENST00000248958 VPS25Q9BRG1 176 aa13□□□□□ -0.33
SDF2L1-201ENST00000248958 C9orf118A6NHY6 69 aa12.99□□□□□ -0.33
SDF2L1-201ENST00000248958 SIGMAR1Q99720 223 aa12.99□□□□□ -0.33
SDF2L1-201ENST00000248958 IGKV4-1P06312 121 aa12.97□□□□□ -0.33
SDF2L1-201ENST00000248958 LINC00472Q9H8W2 130 aa12.96□□□□□ -0.33
SDF2L1-201ENST00000248958 ATP11AUNQ6ZP68 121 aa12.94□□□□□ -0.34
SDF2L1-201ENST00000248958 TAX1BP3O14907 124 aa12.93□□□□□ -0.34
SDF2L1-201ENST00000248958 PDE6GP18545 87 aa12.93□□□□□ -0.34
SDF2L1-201ENST00000248958 A0A1B0GW54 56 aa12.92□□□□□ -0.34
SDF2L1-201ENST00000248958 LOC110117498A0A087WWA1 95 aa12.91□□□□□ -0.34
SDF2L1-201ENST00000248958 C20orf166-AS1Q96NR2 134 aa12.91□□□□□ -0.34
SDF2L1-201ENST00000248958 A0A1W2PPM0 123 aa12.9□□□□□ -0.34
SDF2L1-201ENST00000248958 Q6ZQT0 140 aa12.89□□□□□ -0.35
SDF2L1-201ENST00000248958 DSCR10P59022 87 aa12.88□□□□□ -0.35
SDF2L1-201ENST00000248958 LINC00313P59037 77 aa12.88□□□□□ -0.35
SDF2L1-201ENST00000248958 A8MUU9 505 aa12.87□□□□□ -0.35
SDF2L1-201ENST00000248958 DEFB116Q30KQ4 102 aa12.87□□□□□ -0.35
SDF2L1-201ENST00000248958 H3BT86 120 aa12.85□□□□□ -0.35
SDF2L1-201ENST00000248958 J3KT08 172 aa12.84□□□□□ -0.35
SDF2L1-201ENST00000248958 C14orf132Q9NPU4 83 aa12.82□□□□□ -0.36
SDF2L1-201ENST00000248958 IGHV6-1A0A0B4J1U7 121 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms