RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 hADV29S1A0JD25 119 aa7.94□□□□□ -1.14
DDX39A-201ENST00000242776 H3BUT2 72 aa7.94□□□□□ -1.14
DDX39A-201ENST00000242776 CRCT1Q9UGL9 99 aa7.94□□□□□ -1.14
DDX39A-201ENST00000242776 NAA38Q9BRA0 125 aaKnown RBP7.94□□□□□ -1.14
DDX39A-201ENST00000242776 ERC2-IT1O76042 136 aa7.92□□□□□ -1.14
DDX39A-201ENST00000242776 LINC01547P58512 204 aaPredicted RBP7.92□□□□□ -1.14
DDX39A-201ENST00000242776 CLEC2BQ92478 149 aa7.92□□□□□ -1.14
DDX39A-201ENST00000242776 DNAL4O96015 105 aa7.91□□□□□ -1.14
DDX39A-201ENST00000242776 LCE2DQ5TA82 110 aaPredicted RBP7.91□□□□□ -1.14
DDX39A-201ENST00000242776 FABP2P12104 132 aa7.9□□□□□ -1.14
DDX39A-201ENST00000242776 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.9□□□□□ -1.14
DDX39A-201ENST00000242776 FAM218AQ96MZ4 157 aa7.9□□□□□ -1.14
DDX39A-201ENST00000242776 TRBV20-1A0A075B6N2 111 aa7.89□□□□□ -1.15
DDX39A-201ENST00000242776 A0A1W2PPM0 123 aa7.89□□□□□ -1.15
DDX39A-201ENST00000242776 LST1O00453 97 aa7.89□□□□□ -1.15
DDX39A-201ENST00000242776 ATXN8Q156A1 80 aa7.89□□□□□ -1.15
DDX39A-201ENST00000242776 SPRR4Q96PI1 79 aa7.89□□□□□ -1.15
DDX39A-201ENST00000242776 GHRHP01286 108 aa7.88□□□□□ -1.15
DDX39A-201ENST00000242776 OCIAD2Q56VL3 154 aa7.88□□□□□ -1.15
DDX39A-201ENST00000242776 Q6ZQY7 126 aa7.88□□□□□ -1.15
DDX39A-201ENST00000242776 TRACP01848 142 aa7.87□□□□□ -1.15
DDX39A-201ENST00000242776 FAM229BQ4G0N7 80 aa7.87□□□□□ -1.15
DDX39A-201ENST00000242776 C3orf22Q8N5N4 141 aa7.87□□□□□ -1.15
DDX39A-201ENST00000242776 GAGE2AQ6NT46 116 aa7.87□□□□□ -1.15
DDX39A-201ENST00000242776 ST20-AS1Q8NBB2 130 aa7.87□□□□□ -1.15
DDX39A-201ENST00000242776 KRTAP4-1Q9BYQ7 146 aa7.87□□□□□ -1.15
DDX39A-201ENST00000242776 TEX49A0A1B0GTD5 131 aa7.86□□□□□ -1.15
DDX39A-201ENST00000242776 TCL1BO95988 128 aa7.86□□□□□ -1.15
DDX39A-201ENST00000242776 PPDPFLQ8WWR9 84 aa7.86□□□□□ -1.15
DDX39A-201ENST00000242776 IGLV5-48A0A075B6I7 105 aa7.85□□□□□ -1.15
DDX39A-201ENST00000242776 H3BQ85 93 aa7.85□□□□□ -1.15
DDX39A-201ENST00000242776 LINC00483Q53H64 154 aa7.85□□□□□ -1.15
DDX39A-201ENST00000242776 DEFB105AQ8NG35 78 aa7.85□□□□□ -1.15
DDX39A-201ENST00000242776 SPRR1BP22528 89 aa7.84□□□□□ -1.15
DDX39A-201ENST00000242776 ORMDL1Q9P0S3 153 aa7.84□□□□□ -1.15
DDX39A-201ENST00000242776 SPCS1Q9Y6A9 102 aa7.83□□□□□ -1.16
DDX39A-201ENST00000242776 LAMTOR3Q9UHA4 124 aa7.82□□□□□ -1.16
DDX39A-201ENST00000242776 ASB16-AS1Q495Z4 193 aa7.81□□□□□ -1.16
DDX39A-201ENST00000242776 Q8N377 158 aa7.81□□□□□ -1.16
DDX39A-201ENST00000242776 F8WEM9 126 aa7.8□□□□□ -1.16
DDX39A-201ENST00000242776 TMEM256-PLSCR3K7ERE1 68 aa7.8□□□□□ -1.16
DDX39A-201ENST00000242776 KRTAP13-3Q3SY46 172 aa7.8□□□□□ -1.16
DDX39A-201ENST00000242776 GTF2H5Q6ZYL4 71 aa7.79□□□□□ -1.16
DDX39A-201ENST00000242776 K7EP34 96 aa7.78□□□□□ -1.16
DDX39A-201ENST00000242776 C4orf48Q5BLP8 95 aa7.78□□□□□ -1.16
DDX39A-201ENST00000242776 IGLV9-49A0A0B4J1Y8 123 aa7.77□□□□□ -1.17
DDX39A-201ENST00000242776 C9JAW5 83 aa7.77□□□□□ -1.17
DDX39A-201ENST00000242776 H3BMG7 143 aa7.77□□□□□ -1.17
DDX39A-201ENST00000242776 C9orf153Q5TBE3 101 aa7.77□□□□□ -1.17
DDX39A-201ENST00000242776 FP248Q71RG6 208 aaPredicted RBP7.76□□□□□ -1.17
DDX39A-201ENST00000242776 Q8NBF4 154 aa7.76□□□□□ -1.17
DDX39A-201ENST00000242776 BAALC-AS2P0C853 105 aa7.75□□□□□ -1.17
DDX39A-201ENST00000242776 SEC61BP60468 96 aaKnown RBP7.75□□□□□ -1.17
DDX39A-201ENST00000242776 SPAG11AQ6PDA7 123 aa7.75□□□□□ -1.17
DDX39A-201ENST00000242776 SMIM29Q86T20 159 aa7.75□□□□□ -1.17
DDX39A-201ENST00000242776 H3BT86 120 aa7.75□□□□□ -1.17
DDX39A-201ENST00000242776 UBE2V1Q13404 147 aa7.75□□□□□ -1.17
DDX39A-201ENST00000242776 MOBPQ13875 183 aa7.75□□□□□ -1.17
DDX39A-201ENST00000242776 NDUFV3P56181 108 aaKnown RBP7.74□□□□□ -1.17
DDX39A-201ENST00000242776 SSBP3-AS1Q7Z2R9 100 aa7.72□□□□□ -1.17
DDX39A-201ENST00000242776 ANKRD29Q8N6D5 301 aa7.71□□□□□ -1.18
DDX39A-201ENST00000242776 Q6JHZ5 121 aa7.7□□□□□ -1.18
DDX39A-201ENST00000242776 IGLV8-61A0A075B6I0 122 aa7.69□□□□□ -1.18
DDX39A-201ENST00000242776 LCE2CQ5TA81 110 aa7.69□□□□□ -1.18
DDX39A-201ENST00000242776 MTURNQ8N3F0 131 aa7.69□□□□□ -1.18
DDX39A-201ENST00000242776 A0A1B0GV90 55 aa7.68□□□□□ -1.18
DDX39A-201ENST00000242776 JMJD7-PLA2G4BH0Y9G9 81 aa7.68□□□□□ -1.18
DDX39A-201ENST00000242776 A0A1B0GV72 72 aa7.66□□□□□ -1.18
DDX39A-201ENST00000242776 F8W1H4 67 aa7.66□□□□□ -1.18
DDX39A-201ENST00000242776 RBM3P98179 157 aaKnown RBP7.66□□□□□ -1.18
DDX39A-201ENST00000242776 MT1HP80294 61 aa7.65□□□□□ -1.18
DDX39A-201ENST00000242776 IGFL1Q6UW32 110 aa7.65□□□□□ -1.18
DDX39A-201ENST00000242776 DSCR8Q96T75 97 aa7.65□□□□□ -1.18
DDX39A-201ENST00000242776 PRO0461Q9UI25 63 aa7.65□□□□□ -1.18
DDX39A-201ENST00000242776 SPINK1P00995 79 aa7.64□□□□□ -1.19
DDX39A-201ENST00000242776 SMCPP49901 116 aaPredicted RBP7.62□□□□□ -1.19
DDX39A-201ENST00000242776 CD164Q04900 197 aa7.62□□□□□ -1.19
DDX39A-201ENST00000242776 C21orf62-AS1Q17RA5 79 aa7.62□□□□□ -1.19
DDX39A-201ENST00000242776 XP32Q5T750 250 aa7.62□□□□□ -1.19
DDX39A-201ENST00000242776 TRBV7-4A0A0J9YYF1 115 aa7.61□□□□□ -1.19
DDX39A-201ENST00000242776 PDE6GP18545 87 aa7.61□□□□□ -1.19
DDX39A-201ENST00000242776 KRTAP19-2Q3LHN2 52 aa7.61□□□□□ -1.19
DDX39A-201ENST00000242776 OBSCN-AS1Q96MR7 158 aa7.61□□□□□ -1.19
DDX39A-201ENST00000242776 HRCT1Q6UXD1 115 aa7.6□□□□□ -1.19
DDX39A-201ENST00000242776 TEN1Q86WV5 123 aa7.6□□□□□ -1.19
DDX39A-201ENST00000242776 RPS29P62273 56 aaKnown RBP7.59□□□□□ -1.19
DDX39A-201ENST00000242776 LOC110117498A0A087WWA1 95 aa7.58□□□□□ -1.2
DDX39A-201ENST00000242776 A0A0G2JQZ4 141 aa7.58□□□□□ -1.2
DDX39A-201ENST00000242776 Q6Q795 121 aa7.58□□□□□ -1.2
DDX39A-201ENST00000242776 LIMD2Q9BT23 127 aa7.58□□□□□ -1.2
DDX39A-201ENST00000242776 C14orf132Q9NPU4 83 aa7.58□□□□□ -1.2
DDX39A-201ENST00000242776 CCKP06307 115 aa7.57□□□□□ -1.2
DDX39A-201ENST00000242776 PCOTHQ58A44 107 aa7.57□□□□□ -1.2
DDX39A-201ENST00000242776 TRBV7-7A0A0K0K1E9 115 aa7.56□□□□□ -1.2
DDX39A-201ENST00000242776 KRTAP10-6P60371 365 aaPredicted RBP7.56□□□□□ -1.2
DDX39A-201ENST00000242776 VPS25Q9BRG1 176 aa7.56□□□□□ -1.2
DDX39A-201ENST00000242776 ETDBQ3ZM63 59 aa7.55□□□□□ -1.2
DDX39A-201ENST00000242776 Q6ZQT0 140 aa7.55□□□□□ -1.2
DDX39A-201ENST00000242776 A0A1W2PNM2 257 aa7.55□□□□□ -1.2
DDX39A-201ENST00000242776 LORP23490 312 aaPredicted RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms