RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 C16orf90A8MZG2 172 aa10.57□□□□□ -0.72
SSPN-201ENST00000242729 PANO1I0J062 215 aa10.55□□□□□ -0.72
SSPN-201ENST00000242729 LINC00474Q9P2X8 69 aa10.55□□□□□ -0.72
SSPN-201ENST00000242729 WFDC13Q8IUB5 93 aa10.55□□□□□ -0.72
SSPN-201ENST00000242729 TGP01266 2768 aa10.55□□□□□ -0.72
SSPN-201ENST00000242729 EPM2AB3EWF7 344 aa10.54□□□□□ -0.72
SSPN-201ENST00000242729 UBE2AP49459 152 aa10.54□□□□□ -0.72
SSPN-201ENST00000242729 SPRR4Q96PI1 79 aa10.53□□□□□ -0.72
SSPN-201ENST00000242729 MDFIQ99750 246 aa10.53□□□□□ -0.72
SSPN-201ENST00000242729 APLNQ9ULZ1 77 aa10.53□□□□□ -0.72
SSPN-201ENST00000242729 SERP1Q9Y6X1 66 aa10.52□□□□□ -0.73
SSPN-201ENST00000242729 PRR4Q16378 134 aa10.51□□□□□ -0.73
SSPN-201ENST00000242729 A0A0U1RQV1 116 aa10.5□□□□□ -0.73
SSPN-201ENST00000242729 CNBPP62633 177 aaKnown RBP10.49□□□□□ -0.73
SSPN-201ENST00000242729 STARD9Q9P2P6 4700 aa10.49□□□□□ -0.73
SSPN-201ENST00000242729 LRCOL1A6NCL2 159 aa10.49□□□□□ -0.73
SSPN-201ENST00000242729 FAM229BQ4G0N7 80 aa10.49□□□□□ -0.73
SSPN-201ENST00000242729 FP248Q71RG6 208 aaPredicted RBP10.46□□□□□ -0.73
SSPN-201ENST00000242729 MPLKIPQ8TAP9 179 aa10.46□□□□□ -0.73
SSPN-201ENST00000242729 PRKDCP78527 4128 aaKnown RBP10.45□□□□□ -0.74
SSPN-201ENST00000242729 FRAS1Q86XX4 4008 aa10.45□□□□□ -0.74
SSPN-201ENST00000242729 NDUFC1O43677 76 aa10.44□□□□□ -0.74
SSPN-201ENST00000242729 KMT2AQ03164 3969 aa10.44□□□□□ -0.74
SSPN-201ENST00000242729 HCG22E2RYF7 251 aa10.43□□□□□ -0.74
SSPN-201ENST00000242729 MEGF8Q7Z7M0 2845 aa10.43□□□□□ -0.74
SSPN-201ENST00000242729 IGLV9-49A0A0B4J1Y8 123 aa10.41□□□□□ -0.74
SSPN-201ENST00000242729 NBDYA0A0U1RRE5 68 aa10.41□□□□□ -0.74
SSPN-201ENST00000242729 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.41□□□□□ -0.74
SSPN-201ENST00000242729 C9orf163Q8N9P6 203 aa10.4□□□□□ -0.74
SSPN-201ENST00000242729 ANAPC11Q9NYG5 84 aa10.38□□□□□ -0.75
SSPN-201ENST00000242729 A0A1B0GW54 56 aa10.37□□□□□ -0.75
SSPN-201ENST00000242729 C14orf177Q52M58 125 aa10.36□□□□□ -0.75
SSPN-201ENST00000242729 SMIM26A0A096LP01 95 aa10.35□□□□□ -0.75
SSPN-201ENST00000242729 H0Y9J4 135 aa10.34□□□□□ -0.75
SSPN-201ENST00000242729 LINC00336Q6ZUF6 198 aa10.34□□□□□ -0.75
SSPN-201ENST00000242729 DYNC2H1Q8NCM8 4307 aaKnown RBP10.34□□□□□ -0.75
SSPN-201ENST00000242729 B9D2Q9BPU9 175 aa10.34□□□□□ -0.75
SSPN-201ENST00000242729 Q6ZRN7 208 aaPredicted RBP10.32□□□□□ -0.76
SSPN-201ENST00000242729 HECTD4Q9Y4D8 3996 aa10.32□□□□□ -0.76
SSPN-201ENST00000242729 FBN3Q75N90 2809 aa10.32□□□□□ -0.76
SSPN-201ENST00000242729 LINC00208Q96KT6 92 aa10.31□□□□□ -0.76
SSPN-201ENST00000242729 DNAH2Q9P225 4427 aa10.31□□□□□ -0.76
SSPN-201ENST00000242729 IGLV8-61A0A075B6I0 122 aa10.31□□□□□ -0.76
SSPN-201ENST00000242729 CASC2Q6XLA1 102 aa10.3□□□□□ -0.76
SSPN-201ENST00000242729 DNHD1Q96M86 4753 aa10.29□□□□□ -0.76
SSPN-201ENST00000242729 ATP5EP56381 51 aaPredicted RBP10.28□□□□□ -0.76
SSPN-201ENST00000242729 C1orf64Q8NEQ6 169 aa10.27□□□□□ -0.76
SSPN-201ENST00000242729 LCE6AA0A183 80 aa10.27□□□□□ -0.77
SSPN-201ENST00000242729 VPS13DQ5THJ4 4388 aa10.26□□□□□ -0.77
SSPN-201ENST00000242729 ZCCHC13Q8WW36 166 aaKnown RBP10.26□□□□□ -0.77
SSPN-201ENST00000242729 PRR15Q8IV56 129 aa10.26□□□□□ -0.77
SSPN-201ENST00000242729 LINC00472Q9H8W2 130 aa10.26□□□□□ -0.77
SSPN-201ENST00000242729 NUPR2A6NF83 97 aa10.25□□□□□ -0.77
SSPN-201ENST00000242729 SPACA4Q8TDM5 124 aa10.24□□□□□ -0.77
SSPN-201ENST00000242729 DNAH8Q96JB1 4490 aa10.23□□□□□ -0.77
SSPN-201ENST00000242729 A0A087WTM6 91 aa10.23□□□□□ -0.77
SSPN-201ENST00000242729 KRTAP29-1A8MX34 341 aaPredicted RBP10.23□□□□□ -0.77
SSPN-201ENST00000242729 SPRR1BP22528 89 aa10.23□□□□□ -0.77
SSPN-201ENST00000242729 A8MWP4 228 aa10.22□□□□□ -0.77
SSPN-201ENST00000242729 H0Y9P7 68 aa10.22□□□□□ -0.77
SSPN-201ENST00000242729 MP68P56378 58 aa10.22□□□□□ -0.77
SSPN-201ENST00000242729 KRTAP13-1Q8IUC0 172 aa10.22□□□□□ -0.77
SSPN-201ENST00000242729 BRK1Q8WUW1 75 aa10.22□□□□□ -0.77
SSPN-201ENST00000242729 RTL8CO15255 209 aa10.21□□□□□ -0.78
SSPN-201ENST00000242729 PSORS1C2Q9UIG4 136 aa10.21□□□□□ -0.78
SSPN-201ENST00000242729 DNAH17Q9UFH2 4485 aa10.21□□□□□ -0.78
SSPN-201ENST00000242729 MOBPQ13875 183 aa10.2□□□□□ -0.78
SSPN-201ENST00000242729 DNAH6Q9C0G6 4158 aa10.2□□□□□ -0.78
SSPN-201ENST00000242729 hDV103S1A0JD37 113 aa10.2□□□□□ -0.78
SSPN-201ENST00000242729 PRO0628Q9UI54 55 aa10.19□□□□□ -0.78
SSPN-201ENST00000242729 IGHV6-1A0A0B4J1U7 121 aa10.16□□□□□ -0.78
SSPN-201ENST00000242729 TRAV22A0A0B4J277 110 aa10.16□□□□□ -0.78
SSPN-201ENST00000242729 PSPHP1O15172 72 aa10.16□□□□□ -0.78
SSPN-201ENST00000242729 MMP24-AS1A0A0U1RRL7 71 aa10.14□□□□□ -0.79
SSPN-201ENST00000242729 NDUFS5O43920 106 aa10.14□□□□□ -0.79
SSPN-201ENST00000242729 PCOTHQ58A44 107 aa10.14□□□□□ -0.79
SSPN-201ENST00000242729 SPINK6Q6UWN8 80 aa10.14□□□□□ -0.79
SSPN-201ENST00000242729 Q96NJ1 140 aa10.13□□□□□ -0.79
SSPN-201ENST00000242729 NDUFB1O75438 58 aa10.12□□□□□ -0.79
SSPN-201ENST00000242729 A0A087X002 238 aa10.11□□□□□ -0.79
SSPN-201ENST00000242729 NOTCH2NLQ7Z3S9 236 aa10.11□□□□□ -0.79
SSPN-201ENST00000242729 PKIGQ9Y2B9 76 aa10.11□□□□□ -0.79
SSPN-201ENST00000242729 IGLV5-52A0A0A0MRZ9 124 aa10.1□□□□□ -0.79
SSPN-201ENST00000242729 LY6G6CO95867 125 aa10.1□□□□□ -0.79
SSPN-201ENST00000242729 WWC2-AS2Q96NR7 200 aa10.09□□□□□ -0.79
SSPN-201ENST00000242729 DNAH11Q96DT5 4516 aa10.07□□□□□ -0.8
SSPN-201ENST00000242729 CIRBP-AS1Q8TBR5 109 aa10.06□□□□□ -0.8
SSPN-201ENST00000242729 SEC61GP60059 68 aa10.04□□□□□ -0.8
SSPN-201ENST00000242729 ZNF861PO60384 105 aa10.04□□□□□ -0.8
SSPN-201ENST00000242729 C8orf17Q9NRJ1 99 aa10.03□□□□□ -0.8
SSPN-201ENST00000242729 Q6ZR54 194 aa10.03□□□□□ -0.8
SSPN-201ENST00000242729 C1orf134Q5TEV5 83 aa10.02□□□□□ -0.81
SSPN-201ENST00000242729 CDK2AP2O75956 126 aa10.02□□□□□ -0.81
SSPN-201ENST00000242729 LINC00483Q53H64 154 aa10.02□□□□□ -0.81
SSPN-201ENST00000242729 CYP4F30PQ9H0H9 118 aa10.01□□□□□ -0.81
SSPN-201ENST00000242729 A8MUN3 132 aa10□□□□□ -0.81
SSPN-201ENST00000242729 PLAC8Q9NZF1 115 aa10□□□□□ -0.81
SSPN-201ENST00000242729 ALMS1Q8TCU4 4167 aa9.99□□□□□ -0.81
SSPN-201ENST00000242729 KRTAP10-2P60368 255 aa9.99□□□□□ -0.81
SSPN-201ENST00000242729 ZNF706Q9Y5V0 76 aaPredicted RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms