RNA–Protein interactions for RNA: ENST00000223073.6

RBM28-201, Transcript of RNA binding motif protein 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBM28, Length 15,507 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-201ENST00000223073 RTL8CO15255 209 aa4.28□□□□□ -1.72
RBM28-201ENST00000223073 KRTAP29-1A8MX34 341 aaPredicted RBP4.27□□□□□ -1.73
RBM28-201ENST00000223073 H1FX-AS1Q4G0G2 97 aa4.27□□□□□ -1.73
RBM28-201ENST00000223073 COL4A2P08572 1712 aa4.27□□□□□ -1.73
RBM28-201ENST00000223073 NBDYA0A0U1RRE5 68 aa4.25□□□□□ -1.73
RBM28-201ENST00000223073 BAHCC1Q9P281 2608 aa4.25□□□□□ -1.73
RBM28-201ENST00000223073 Q5W150 140 aa4.24□□□□□ -1.73
RBM28-201ENST00000223073 A0A0C4DFX4 3053 aa4.24□□□□□ -1.73
RBM28-201ENST00000223073 LINC00304Q8N9R0 145 aa4.24□□□□□ -1.73
RBM28-201ENST00000223073 A8MUU9 505 aa4.24□□□□□ -1.73
RBM28-201ENST00000223073 A0A0G2JQZ4 141 aa4.22□□□□□ -1.73
RBM28-201ENST00000223073 A0A1W2PNN7 141 aa4.22□□□□□ -1.73
RBM28-201ENST00000223073 PSORS1C2Q9UIG4 136 aa4.21□□□□□ -1.74
RBM28-201ENST00000223073 A0A1W2PPR1 153 aa4.2□□□□□ -1.74
RBM28-201ENST00000223073 ITPR3Q14573 2671 aa4.2□□□□□ -1.74
RBM28-201ENST00000223073 ITPR1Q14643 2758 aa4.2□□□□□ -1.74
RBM28-201ENST00000223073 PANO1I0J062 215 aa4.19□□□□□ -1.74
RBM28-201ENST00000223073 ANAPC11Q9NYG5 84 aa4.19□□□□□ -1.74
RBM28-201ENST00000223073 CFAP46Q8IYW2 2715 aa4.18□□□□□ -1.74
RBM28-201ENST00000223073 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.17□□□□□ -1.74
RBM28-201ENST00000223073 GCN1Q92616 2671 aaKnown RBP4.16□□□□□ -1.74
RBM28-201ENST00000223073 KRTAP26-1Q6PEX3 210 aa4.16□□□□□ -1.74
RBM28-201ENST00000223073 UTP20O75691 2785 aaKnown RBP4.16□□□□□ -1.74
RBM28-201ENST00000223073 PLAC4Q8WY50 150 aa4.15□□□□□ -1.75
RBM28-201ENST00000223073 FLNBO75369 2602 aaKnown RBP4.15□□□□□ -1.75
RBM28-201ENST00000223073 NSD1Q96L73 2696 aaPredicted RBP4.14□□□□□ -1.75
RBM28-201ENST00000223073 Q8NDZ9 215 aa4.14□□□□□ -1.75
RBM28-201ENST00000223073 EP400Q96L91 3159 aa4.13□□□□□ -1.75
RBM28-201ENST00000223073 KRTAP11-1Q8IUC1 163 aa4.13□□□□□ -1.75
RBM28-201ENST00000223073 NBEAL2Q6ZNJ1 2754 aa4.13□□□□□ -1.75
RBM28-201ENST00000223073 S4R3F8 94 aa4.12□□□□□ -1.75
RBM28-201ENST00000223073 IGSF10Q6WRI0 2623 aa4.12□□□□□ -1.75
RBM28-201ENST00000223073 GOLGB1Q14789 3259 aaKnown RBP4.12□□□□□ -1.75
RBM28-201ENST00000223073 MAP1AP78559 2803 aaPredicted RBP4.11□□□□□ -1.75
RBM28-201ENST00000223073 M0QZ58 72 aa4.11□□□□□ -1.75
RBM28-201ENST00000223073 PLAC8Q9NZF1 115 aa4.1□□□□□ -1.75
RBM28-201ENST00000223073 UBR5O95071 2799 aaPredicted RBP4.1□□□□□ -1.75
RBM28-201ENST00000223073 CFAP54Q96N23 3096 aa4.09□□□□□ -1.75
RBM28-201ENST00000223073 KRTAP4-16G5E9R7 235 aaPredicted RBP4.09□□□□□ -1.75
RBM28-201ENST00000223073 FLNAP21333 2647 aaKnown RBP4.09□□□□□ -1.75
RBM28-201ENST00000223073 KRTAP24-1Q3LI83 254 aa4.09□□□□□ -1.75
RBM28-201ENST00000223073 A0A087WTM6 91 aa4.08□□□□□ -1.76
RBM28-201ENST00000223073 PP632Q6XCG6 107 aa4.08□□□□□ -1.76
RBM28-201ENST00000223073 TEX15Q9BXT5 2789 aa4.06□□□□□ -1.76
RBM28-201ENST00000223073 C9orf92A6NGG3 77 aa4.06□□□□□ -1.76
RBM28-201ENST00000223073 WWC2-AS2Q96NR7 200 aa4.05□□□□□ -1.76
RBM28-201ENST00000223073 ZNF292O60281 2723 aa4.03□□□□□ -1.76
RBM28-201ENST00000223073 DSPP15924 2871 aaKnown RBP4.03□□□□□ -1.76
RBM28-201ENST00000223073 CEP350Q5VT06 3117 aa4.02□□□□□ -1.77
RBM28-201ENST00000223073 SETXQ7Z333 2677 aaKnown RBP4□□□□□ -1.77
RBM28-201ENST00000223073 APCP25054 2843 aa4□□□□□ -1.77
RBM28-201ENST00000223073 R4GN34 69 aa4□□□□□ -1.77
RBM28-201ENST00000223073 K7EIL1 84 aa3.99□□□□□ -1.77
RBM28-201ENST00000223073 KRTAP10-11P60412 298 aa3.98□□□□□ -1.77
RBM28-201ENST00000223073 UTRNP46939 3433 aa3.97□□□□□ -1.77
RBM28-201ENST00000223073 LAMA2P24043 3122 aaKnown RBP3.97□□□□□ -1.77
RBM28-201ENST00000223073 RPS29P62273 56 aaKnown RBP3.97□□□□□ -1.77
RBM28-201ENST00000223073 LRBAP50851 2863 aa3.97□□□□□ -1.77
RBM28-201ENST00000223073 SMR3BP02814 79 aaPredicted RBP3.96□□□□□ -1.78
RBM28-201ENST00000223073 Q6ZSA8 131 aa3.96□□□□□ -1.78
RBM28-201ENST00000223073 P0C880 135 aa3.95□□□□□ -1.78
RBM28-201ENST00000223073 DNAH12Q6ZR08 3092 aa3.95□□□□□ -1.78
RBM28-201ENST00000223073 C10orf95Q9H7T3 257 aa3.94□□□□□ -1.78
RBM28-201ENST00000223073 ASH1LQ9NR48 2969 aaKnown RBP3.93□□□□□ -1.78
RBM28-201ENST00000223073 NBEAQ8NFP9 2946 aa3.93□□□□□ -1.78
RBM28-201ENST00000223073 FREM2Q5SZK8 3169 aa3.92□□□□□ -1.78
RBM28-201ENST00000223073 ITPR2Q14571 2701 aa3.92□□□□□ -1.78
RBM28-201ENST00000223073 PRUNE2Q8WUY3 3088 aa3.91□□□□□ -1.78
RBM28-201ENST00000223073 CHD9Q3L8U1 2897 aa3.9□□□□□ -1.79
RBM28-201ENST00000223073 FRYQ5TBA9 3013 aa3.9□□□□□ -1.79
RBM28-201ENST00000223073 CELSR2Q9HCU4 2923 aa3.9□□□□□ -1.79
RBM28-201ENST00000223073 KRTAP10-3P60369 221 aa3.89□□□□□ -1.79
RBM28-201ENST00000223073 MGAQ8IWI9 3026 aa3.89□□□□□ -1.79
RBM28-201ENST00000223073 HIVEP1P15822 2718 aa3.88□□□□□ -1.79
RBM28-201ENST00000223073 FRYLO94915 3013 aa3.87□□□□□ -1.79
RBM28-201ENST00000223073 KALRNO60229 2985 aa3.87□□□□□ -1.79
RBM28-201ENST00000223073 H0YAA0 97 aa3.87□□□□□ -1.79
RBM28-201ENST00000223073 PCNTO95613 3336 aa3.87□□□□□ -1.79
RBM28-201ENST00000223073 TRANK1O15050 2925 aa3.85□□□□□ -1.79
RBM28-201ENST00000223073 C5orf42Q9H799 3197 aa3.84□□□□□ -1.79
RBM28-201ENST00000223073 TNP1P09430 55 aa3.83□□□□□ -1.8
RBM28-201ENST00000223073 NIPBLQ6KC79 2804 aaeCLIP3.81□□□□□ -1.8
RBM28-201ENST00000223073 DMXL2Q8TDJ6 3036 aa3.81□□□□□ -1.8
RBM28-201ENST00000223073 KRTAP13-1Q8IUC0 172 aa3.81□□□□□ -1.8
RBM28-201ENST00000223073 M0R2T5 61 aa3.8□□□□□ -1.8
RBM28-201ENST00000223073 PDZD2O15018 2839 aa3.78□□□□□ -1.8
RBM28-201ENST00000223073 KRTAP1-3Q8IUG1 177 aa3.78□□□□□ -1.8
RBM28-201ENST00000223073 TENM3Q9P273 2699 aa3.78□□□□□ -1.8
RBM28-201ENST00000223073 TRIOO75962 3097 aa3.77□□□□□ -1.81
RBM28-201ENST00000223073 KMT2BQ9UMN6 2715 aaPredicted RBP3.77□□□□□ -1.81
RBM28-201ENST00000223073 TGP01266 2768 aa3.76□□□□□ -1.81
RBM28-201ENST00000223073 INE1O15225 51 aa3.75□□□□□ -1.81
RBM28-201ENST00000223073 KRTAP1-1Q07627 177 aa3.75□□□□□ -1.81
RBM28-201ENST00000223073 CRYBG3Q68DQ2 2970 aa3.75□□□□□ -1.81
RBM28-201ENST00000223073 KRTAP15-1Q3LI76 137 aa3.75□□□□□ -1.81
RBM28-201ENST00000223073 KRTAP23-1A1A580 65 aa3.74□□□□□ -1.81
RBM28-201ENST00000223073 COL12A1Q99715 3063 aa3.73□□□□□ -1.81
RBM28-201ENST00000223073 KRTAP7-1Q8IUC3 87 aa3.73□□□□□ -1.81
RBM28-201ENST00000223073 Q6ZRN7 208 aaPredicted RBP3.71□□□□□ -1.82
RBM28-201ENST00000223073 VPS13AQ96RL7 3174 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms