RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 PRR15Q8IV56 129 aa7.48□□□□□ -1.21
NOD1-201ENST00000222823 GCN1Q92616 2671 aaKnown RBP7.48□□□□□ -1.21
NOD1-201ENST00000222823 SSBP3-AS1Q7Z2R9 100 aa7.48□□□□□ -1.21
NOD1-201ENST00000222823 UBR5O95071 2799 aaPredicted RBP7.47□□□□□ -1.21
NOD1-201ENST00000222823 A0A0G2JQZ4 141 aa7.47□□□□□ -1.21
NOD1-201ENST00000222823 A0A1W2PNN7 141 aa7.47□□□□□ -1.21
NOD1-201ENST00000222823 CASC10Q5T4H9 136 aa7.47□□□□□ -1.21
NOD1-201ENST00000222823 RELNP78509 3460 aa7.47□□□□□ -1.21
NOD1-201ENST00000222823 OBSCN-AS1Q96MR7 158 aa7.45□□□□□ -1.22
NOD1-201ENST00000222823 ASH1LQ9NR48 2969 aaKnown RBP7.45□□□□□ -1.22
NOD1-201ENST00000222823 C8orf17Q9NRJ1 99 aa7.44□□□□□ -1.22
NOD1-201ENST00000222823 ITPR1Q14643 2758 aa7.44□□□□□ -1.22
NOD1-201ENST00000222823 SMG1Q96Q15 3661 aaKnown RBP7.44□□□□□ -1.22
NOD1-201ENST00000222823 KLKP1Q107X0 134 aa7.44□□□□□ -1.22
NOD1-201ENST00000222823 ATP11AUNQ6ZP68 121 aa7.43□□□□□ -1.22
NOD1-201ENST00000222823 IGLV8-61A0A075B6I0 122 aa7.42□□□□□ -1.22
NOD1-201ENST00000222823 APLNQ9ULZ1 77 aa7.42□□□□□ -1.22
NOD1-201ENST00000222823 CNBPP62633 177 aaKnown RBP7.42□□□□□ -1.22
NOD1-201ENST00000222823 ANAPC11Q9NYG5 84 aa7.42□□□□□ -1.22
NOD1-201ENST00000222823 A0A1W2PNM2 257 aa7.41□□□□□ -1.22
NOD1-201ENST00000222823 A0A1B0GVX0 72 aa7.41□□□□□ -1.22
NOD1-201ENST00000222823 PSORS1C2Q9UIG4 136 aa7.4□□□□□ -1.22
NOD1-201ENST00000222823 DSCR10P59022 87 aa7.4□□□□□ -1.22
NOD1-201ENST00000222823 UTP20O75691 2785 aaKnown RBP7.4□□□□□ -1.22
NOD1-201ENST00000222823 COA5Q86WW8 74 aa7.39□□□□□ -1.23
NOD1-201ENST00000222823 LINC00304Q8N9R0 145 aa7.39□□□□□ -1.23
NOD1-201ENST00000222823 A8MUN3 132 aa7.38□□□□□ -1.23
NOD1-201ENST00000222823 FLG2Q5D862 2391 aaPredicted RBP7.38□□□□□ -1.23
NOD1-201ENST00000222823 IGLV7-43P04211 117 aa7.38□□□□□ -1.23
NOD1-201ENST00000222823 SMR3BP02814 79 aaPredicted RBP7.37□□□□□ -1.23
NOD1-201ENST00000222823 NBEAL2Q6ZNJ1 2754 aa7.37□□□□□ -1.23
NOD1-201ENST00000222823 SPRR4Q96PI1 79 aa7.37□□□□□ -1.23
NOD1-201ENST00000222823 ZANQ9Y493 2812 aa7.37□□□□□ -1.23
NOD1-201ENST00000222823 CSMD1Q96PZ7 3565 aa7.36□□□□□ -1.23
NOD1-201ENST00000222823 IGLV5-48A0A075B6I7 105 aa7.36□□□□□ -1.23
NOD1-201ENST00000222823 NSD1Q96L73 2696 aaPredicted RBP7.36□□□□□ -1.23
NOD1-201ENST00000222823 H7BZZ5 65 aa7.35□□□□□ -1.23
NOD1-201ENST00000222823 WIPF1O43516 503 aa7.35□□□□□ -1.23
NOD1-201ENST00000222823 IGLV5-37A0A075B6J1 123 aa7.34□□□□□ -1.23
NOD1-201ENST00000222823 CYP4F30PQ9H0H9 118 aa7.32□□□□□ -1.24
NOD1-201ENST00000222823 J3QL48 77 aa7.31□□□□□ -1.24
NOD1-201ENST00000222823 STAB2Q8WWQ8 2551 aa7.31□□□□□ -1.24
NOD1-201ENST00000222823 UQCR11O14957 56 aa7.31□□□□□ -1.24
NOD1-201ENST00000222823 C9orf92A6NGG3 77 aa7.3□□□□□ -1.24
NOD1-201ENST00000222823 Q8NDZ9 215 aa7.29□□□□□ -1.24
NOD1-201ENST00000222823 DCHS2Q6V1P9 2916 aa7.29□□□□□ -1.24
NOD1-201ENST00000222823 KRTAP21-3Q3LHN1 58 aa7.29□□□□□ -1.24
NOD1-201ENST00000222823 SVEP1Q4LDE5 3571 aa7.29□□□□□ -1.24
NOD1-201ENST00000222823 LINC00336Q6ZUF6 198 aa7.28□□□□□ -1.24
NOD1-201ENST00000222823 APCP25054 2843 aa7.27□□□□□ -1.25
NOD1-201ENST00000222823 TNP2Q05952 138 aa7.27□□□□□ -1.25
NOD1-201ENST00000222823 CRYBG3Q68DQ2 2970 aa7.23□□□□□ -1.25
NOD1-201ENST00000222823 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.23□□□□□ -1.25
NOD1-201ENST00000222823 COX6B2Q6YFQ2 88 aa7.22□□□□□ -1.25
NOD1-201ENST00000222823 ITPR2Q14571 2701 aa7.22□□□□□ -1.25
NOD1-201ENST00000222823 OCR1Q9BZK8 76 aa7.21□□□□□ -1.25
NOD1-201ENST00000222823 SPANXA2-OT1Q8N9U9 137 aa7.21□□□□□ -1.26
NOD1-201ENST00000222823 MIR22HGQ0VDD5 57 aa7.2□□□□□ -1.26
NOD1-201ENST00000222823 MXRA5Q9NR99 2828 aa7.18□□□□□ -1.26
NOD1-201ENST00000222823 KRTAP26-1Q6PEX3 210 aa7.18□□□□□ -1.26
NOD1-201ENST00000222823 SPENQ96T58 3664 aaKnown RBP7.18□□□□□ -1.26
NOD1-201ENST00000222823 CUBNO60494 3623 aa7.17□□□□□ -1.26
NOD1-201ENST00000222823 NF1P21359 2839 aa7.16□□□□□ -1.26
NOD1-201ENST00000222823 CELSR1Q9NYQ6 3014 aa7.16□□□□□ -1.26
NOD1-201ENST00000222823 CD164Q04900 197 aa7.16□□□□□ -1.26
NOD1-201ENST00000222823 Q8N1X5 172 aa7.16□□□□□ -1.26
NOD1-201ENST00000222823 DMBT1Q9UGM3 2413 aaPredicted RBP7.16□□□□□ -1.26
NOD1-201ENST00000222823 SPRR1AP35321 89 aa7.16□□□□□ -1.26
NOD1-201ENST00000222823 CELSR2Q9HCU4 2923 aa7.15□□□□□ -1.26
NOD1-201ENST00000222823 FBN2P35556 2912 aa7.15□□□□□ -1.26
NOD1-201ENST00000222823 PRR26Q8N8Z3 221 aa7.14□□□□□ -1.27
NOD1-201ENST00000222823 RBM12B-AS1Q9P1G2 102 aa7.11□□□□□ -1.27
NOD1-201ENST00000222823 SPINT4Q6UDR6 99 aa7.1□□□□□ -1.27
NOD1-201ENST00000222823 CYSTM1Q9H1C7 97 aa7.1□□□□□ -1.27
NOD1-201ENST00000222823 PLAC8Q9NZF1 115 aa7.1□□□□□ -1.27
NOD1-201ENST00000222823 FAM229BQ4G0N7 80 aa7.08□□□□□ -1.28
NOD1-201ENST00000222823 CRIPTQ9P021 101 aa7.08□□□□□ -1.28
NOD1-201ENST00000222823 KRTAP1-5Q9BYS1 174 aa7.08□□□□□ -1.28
NOD1-201ENST00000222823 HIVEP1P15822 2718 aa7.07□□□□□ -1.28
NOD1-201ENST00000222823 IGLV7-46A0A075B6I9 117 aa7.06□□□□□ -1.28
NOD1-201ENST00000222823 SPRR1BP22528 89 aa7.06□□□□□ -1.28
NOD1-201ENST00000222823 MMP24-AS1A0A0U1RRL7 71 aa7.05□□□□□ -1.28
NOD1-201ENST00000222823 BSNQ9UPA5 3926 aa7.05□□□□□ -1.28
NOD1-201ENST00000222823 HRES1P13985 223 aa7.04□□□□□ -1.28
NOD1-201ENST00000222823 LINC01554Q52M75 96 aa7.03□□□□□ -1.28
NOD1-201ENST00000222823 NIPBLQ6KC79 2804 aaeCLIP7.03□□□□□ -1.28
NOD1-201ENST00000222823 A0A0D9SG42 100 aa7.03□□□□□ -1.28
NOD1-201ENST00000222823 CDC42SE1Q9NRR8 79 aa7.02□□□□□ -1.29
NOD1-201ENST00000222823 LINC00472Q9H8W2 130 aa7.02□□□□□ -1.29
NOD1-201ENST00000222823 Q1T7F1 81 aa7.01□□□□□ -1.29
NOD1-201ENST00000222823 Q6ZSA8 131 aa7□□□□□ -1.29
NOD1-201ENST00000222823 KMT2BQ9UMN6 2715 aaPredicted RBP7□□□□□ -1.29
NOD1-201ENST00000222823 Q8N9P0 234 aaPredicted RBP7□□□□□ -1.29
NOD1-201ENST00000222823 KRTAP4-16G5E9R7 235 aaPredicted RBP6.99□□□□□ -1.29
NOD1-201ENST00000222823 KTN1-AS1Q86SY8 53 aa6.99□□□□□ -1.29
NOD1-201ENST00000222823 TENM4Q6N022 2769 aa6.99□□□□□ -1.29
NOD1-201ENST00000222823 ZCCHC13Q8WW36 166 aaKnown RBP6.95□□□□□ -1.3
NOD1-201ENST00000222823 LCA10Q71F78 164 aa6.95□□□□□ -1.3
NOD1-201ENST00000222823 A0A1B0GU33 70 aa6.93□□□□□ -1.3
NOD1-201ENST00000222823 Q5XG85 94 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms