RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 DNAH7Q8WXX0 4024 aa9.23□□□□□ -0.93
CNOT3-201ENST00000221232 KLKP1Q107X0 134 aa9.22□□□□□ -0.93
CNOT3-201ENST00000221232 C16orf90A8MZG2 172 aa9.22□□□□□ -0.93
CNOT3-201ENST00000221232 TMEM254Q8TBM7 123 aa9.22□□□□□ -0.93
CNOT3-201ENST00000221232 K7EQZ3 153 aa9.19□□□□□ -0.94
CNOT3-201ENST00000221232 APLNQ9ULZ1 77 aa9.19□□□□□ -0.94
CNOT3-201ENST00000221232 IGFL1Q6UW32 110 aa9.19□□□□□ -0.94
CNOT3-201ENST00000221232 MDFIQ99750 246 aa9.19□□□□□ -0.94
CNOT3-201ENST00000221232 OCR1Q9BZK8 76 aa9.18□□□□□ -0.94
CNOT3-201ENST00000221232 DSCR10P59022 87 aa9.18□□□□□ -0.94
CNOT3-201ENST00000221232 A0A087WSZ3 146 aa9.17□□□□□ -0.94
CNOT3-201ENST00000221232 UBE2AP49459 152 aa9.16□□□□□ -0.94
CNOT3-201ENST00000221232 SPRR4Q96PI1 79 aa9.16□□□□□ -0.94
CNOT3-201ENST00000221232 CNBPP62633 177 aaKnown RBP9.15□□□□□ -0.94
CNOT3-201ENST00000221232 EPM2AB3EWF7 344 aa9.15□□□□□ -0.94
CNOT3-201ENST00000221232 PANO1I0J062 215 aa9.15□□□□□ -0.94
CNOT3-201ENST00000221232 RPL37AP61513 92 aaKnown RBP9.15□□□□□ -0.94
CNOT3-201ENST00000221232 MPLKIPQ8TAP9 179 aa9.14□□□□□ -0.95
CNOT3-201ENST00000221232 WFDC13Q8IUB5 93 aa9.12□□□□□ -0.95
CNOT3-201ENST00000221232 PLECQ15149 4684 aaKnown RBP9.11□□□□□ -0.95
CNOT3-201ENST00000221232 FAM229BQ4G0N7 80 aa9.11□□□□□ -0.95
CNOT3-201ENST00000221232 SERP1Q9Y6X1 66 aa9.1□□□□□ -0.95
CNOT3-201ENST00000221232 NBDYA0A0U1RRE5 68 aa9.08□□□□□ -0.96
CNOT3-201ENST00000221232 LRCOL1A6NCL2 159 aa9.08□□□□□ -0.96
CNOT3-201ENST00000221232 C9orf163Q8N9P6 203 aa9.08□□□□□ -0.96
CNOT3-201ENST00000221232 A0A1B0GW54 56 aa9.07□□□□□ -0.96
CNOT3-201ENST00000221232 C14orf177Q52M58 125 aa9.07□□□□□ -0.96
CNOT3-201ENST00000221232 NDUFC1O43677 76 aa9.07□□□□□ -0.96
CNOT3-201ENST00000221232 B9D2Q9BPU9 175 aa9.06□□□□□ -0.96
CNOT3-201ENST00000221232 HCG22E2RYF7 251 aa9.05□□□□□ -0.96
CNOT3-201ENST00000221232 PRR4Q16378 134 aa9.04□□□□□ -0.96
CNOT3-201ENST00000221232 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.04□□□□□ -0.96
CNOT3-201ENST00000221232 IGLV9-49A0A0B4J1Y8 123 aa9.02□□□□□ -0.97
CNOT3-201ENST00000221232 Q6ZRN7 208 aaPredicted RBP9□□□□□ -0.97
CNOT3-201ENST00000221232 IGLV8-61A0A075B6I0 122 aa8.99□□□□□ -0.97
CNOT3-201ENST00000221232 STARD9Q9P2P6 4700 aa8.99□□□□□ -0.97
CNOT3-201ENST00000221232 SMIM26A0A096LP01 95 aa8.98□□□□□ -0.97
CNOT3-201ENST00000221232 A8MU10 97 aa8.98□□□□□ -0.97
CNOT3-201ENST00000221232 PMAIP1Q13794 54 aa8.98□□□□□ -0.97
CNOT3-201ENST00000221232 ANAPC11Q9NYG5 84 aa8.98□□□□□ -0.97
CNOT3-201ENST00000221232 NUPR2A6NF83 97 aa8.97□□□□□ -0.97
CNOT3-201ENST00000221232 H0Y9J4 135 aa8.96□□□□□ -0.97
CNOT3-201ENST00000221232 KMT2AQ03164 3969 aa8.94□□□□□ -0.98
CNOT3-201ENST00000221232 TGP01266 2768 aa8.94□□□□□ -0.98
CNOT3-201ENST00000221232 C4orf48Q5BLP8 95 aa8.93□□□□□ -0.98
CNOT3-201ENST00000221232 CASC2Q6XLA1 102 aa8.93□□□□□ -0.98
CNOT3-201ENST00000221232 A0A087WTM6 91 aa8.93□□□□□ -0.98
CNOT3-201ENST00000221232 SPRR1BP22528 89 aa8.93□□□□□ -0.98
CNOT3-201ENST00000221232 ATP5EP56381 51 aaPredicted RBP8.93□□□□□ -0.98
CNOT3-201ENST00000221232 LINC00208Q96KT6 92 aa8.93□□□□□ -0.98
CNOT3-201ENST00000221232 PRKDCP78527 4128 aaKnown RBP8.92□□□□□ -0.98
CNOT3-201ENST00000221232 SPACA4Q8TDM5 124 aa8.91□□□□□ -0.98
CNOT3-201ENST00000221232 LINC00472Q9H8W2 130 aa8.91□□□□□ -0.98
CNOT3-201ENST00000221232 LCE6AA0A183 80 aa8.91□□□□□ -0.98
CNOT3-201ENST00000221232 PRR15Q8IV56 129 aa8.91□□□□□ -0.98
CNOT3-201ENST00000221232 DYNC2H1Q8NCM8 4307 aaKnown RBP8.91□□□□□ -0.98
CNOT3-201ENST00000221232 FRAS1Q86XX4 4008 aa8.91□□□□□ -0.98
CNOT3-201ENST00000221232 KRTAP13-1Q8IUC0 172 aa8.9□□□□□ -0.99
CNOT3-201ENST00000221232 ZCCHC13Q8WW36 166 aaKnown RBP8.89□□□□□ -0.99
CNOT3-201ENST00000221232 RTL8CO15255 209 aa8.89□□□□□ -0.99
CNOT3-201ENST00000221232 A8MWP4 228 aa8.88□□□□□ -0.99
CNOT3-201ENST00000221232 PSORS1C2Q9UIG4 136 aa8.88□□□□□ -0.99
CNOT3-201ENST00000221232 KRTAP29-1A8MX34 341 aaPredicted RBP8.87□□□□□ -0.99
CNOT3-201ENST00000221232 MP68P56378 58 aa8.87□□□□□ -0.99
CNOT3-201ENST00000221232 C1orf64Q8NEQ6 169 aa8.87□□□□□ -0.99
CNOT3-201ENST00000221232 H0Y9P7 68 aa8.86□□□□□ -0.99
CNOT3-201ENST00000221232 MOBPQ13875 183 aa8.86□□□□□ -0.99
CNOT3-201ENST00000221232 MEGF8Q7Z7M0 2845 aa8.85□□□□□ -0.99
CNOT3-201ENST00000221232 hDV103S1A0JD37 113 aa8.82□□□□□ -1
CNOT3-201ENST00000221232 DNAH2Q9P225 4427 aa8.82□□□□□ -1
CNOT3-201ENST00000221232 VPS13DQ5THJ4 4388 aa8.82□□□□□ -1
CNOT3-201ENST00000221232 PSPHP1O15172 72 aa8.82□□□□□ -1
CNOT3-201ENST00000221232 HECTD4Q9Y4D8 3996 aa8.81□□□□□ -1
CNOT3-201ENST00000221232 IGLV5-52A0A0A0MRZ9 124 aa8.81□□□□□ -1
CNOT3-201ENST00000221232 NDUFB1O75438 58 aa8.81□□□□□ -1
CNOT3-201ENST00000221232 LY6G6CO95867 125 aa8.81□□□□□ -1
CNOT3-201ENST00000221232 IGHV6-1A0A0B4J1U7 121 aa8.8□□□□□ -1
CNOT3-201ENST00000221232 TRAV22A0A0B4J277 110 aa8.8□□□□□ -1
CNOT3-201ENST00000221232 MMP24-AS1A0A0U1RRL7 71 aa8.79□□□□□ -1
CNOT3-201ENST00000221232 NDUFS5O43920 106 aa8.79□□□□□ -1
CNOT3-201ENST00000221232 CD164Q04900 197 aa8.79□□□□□ -1
CNOT3-201ENST00000221232 Q96NJ1 140 aa8.78□□□□□ -1
CNOT3-201ENST00000221232 DNHD1Q96M86 4753 aa8.78□□□□□ -1
CNOT3-201ENST00000221232 SPINK6Q6UWN8 80 aa8.78□□□□□ -1
CNOT3-201ENST00000221232 WWC2-AS2Q96NR7 200 aa8.78□□□□□ -1
CNOT3-201ENST00000221232 DNAH8Q96JB1 4490 aa8.76□□□□□ -1.01
CNOT3-201ENST00000221232 ZNF861PO60384 105 aa8.76□□□□□ -1.01
CNOT3-201ENST00000221232 C1orf134Q5TEV5 83 aa8.76□□□□□ -1.01
CNOT3-201ENST00000221232 Q6ZR54 194 aa8.76□□□□□ -1.01
CNOT3-201ENST00000221232 PCOTHQ58A44 107 aa8.75□□□□□ -1.01
CNOT3-201ENST00000221232 FBN3Q75N90 2809 aa8.75□□□□□ -1.01
CNOT3-201ENST00000221232 A0A087X002 238 aa8.75□□□□□ -1.01
CNOT3-201ENST00000221232 NOTCH2NLQ7Z3S9 236 aa8.75□□□□□ -1.01
CNOT3-201ENST00000221232 DNAH17Q9UFH2 4485 aa8.74□□□□□ -1.01
CNOT3-201ENST00000221232 LINC00483Q53H64 154 aa8.74□□□□□ -1.01
CNOT3-201ENST00000221232 PLAC8Q9NZF1 115 aa8.74□□□□□ -1.01
CNOT3-201ENST00000221232 CIRBP-AS1Q8TBR5 109 aa8.73□□□□□ -1.01
CNOT3-201ENST00000221232 CDK2AP2O75956 126 aa8.72□□□□□ -1.01
CNOT3-201ENST00000221232 RBM12B-AS1Q9P1G2 102 aa8.72□□□□□ -1.01
CNOT3-201ENST00000221232 ZNF706Q9Y5V0 76 aaPredicted RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms