RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 DYNC2H1Q8NCM8 4307 aaKnown RBP10.87□□□□□ -0.67
USB1-201ENST00000219281 C16orf90A8MZG2 172 aa10.87□□□□□ -0.67
USB1-201ENST00000219281 PSCAO43653 123 aa10.87□□□□□ -0.67
USB1-201ENST00000219281 KRTAP1-5Q9BYS1 174 aa10.87□□□□□ -0.67
USB1-201ENST00000219281 HCG22E2RYF7 251 aa10.85□□□□□ -0.67
USB1-201ENST00000219281 CSMD3Q7Z407 3707 aa10.83□□□□□ -0.68
USB1-201ENST00000219281 A0A087WSZ3 146 aa10.83□□□□□ -0.68
USB1-201ENST00000219281 CNBPP62633 177 aaKnown RBP10.82□□□□□ -0.68
USB1-201ENST00000219281 MPLKIPQ8TAP9 179 aa10.82□□□□□ -0.68
USB1-201ENST00000219281 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.81□□□□□ -0.68
USB1-201ENST00000219281 ZCCHC13Q8WW36 166 aaKnown RBP10.81□□□□□ -0.68
USB1-201ENST00000219281 B9D2Q9BPU9 175 aa10.81□□□□□ -0.68
USB1-201ENST00000219281 DNAH7Q8WXX0 4024 aa10.81□□□□□ -0.68
USB1-201ENST00000219281 IGLV8-61A0A075B6I0 122 aa10.81□□□□□ -0.68
USB1-201ENST00000219281 PLECQ15149 4684 aaKnown RBP10.8□□□□□ -0.68
USB1-201ENST00000219281 UBE2AP49459 152 aa10.8□□□□□ -0.68
USB1-201ENST00000219281 APLNQ9ULZ1 77 aa10.79□□□□□ -0.68
USB1-201ENST00000219281 WFDC13Q8IUB5 93 aa10.79□□□□□ -0.68
USB1-201ENST00000219281 KRTAP11-1Q8IUC1 163 aa10.79□□□□□ -0.68
USB1-201ENST00000219281 TENM2Q9NT68 2774 aa10.78□□□□□ -0.68
USB1-201ENST00000219281 PHF5AQ7RTV0 110 aaKnown RBP10.78□□□□□ -0.68
USB1-201ENST00000219281 CHTF8P0CG12 524 aa10.78□□□□□ -0.68
USB1-201ENST00000219281 RPL37AP61513 92 aaKnown RBP10.78□□□□□ -0.68
USB1-201ENST00000219281 PRKDCP78527 4128 aaKnown RBP10.77□□□□□ -0.69
USB1-201ENST00000219281 PRO0628Q9UI54 55 aa10.77□□□□□ -0.69
USB1-201ENST00000219281 UBE2DNLQ8IWF7 75 aa10.75□□□□□ -0.69
USB1-201ENST00000219281 hDV103S1A0JD37 113 aa10.74□□□□□ -0.69
USB1-201ENST00000219281 DNHD1Q96M86 4753 aa10.73□□□□□ -0.69
USB1-201ENST00000219281 C1orf64Q8NEQ6 169 aa10.72□□□□□ -0.69
USB1-201ENST00000219281 LRCOL1A6NCL2 159 aa10.72□□□□□ -0.69
USB1-201ENST00000219281 PRR4Q16378 134 aa10.7□□□□□ -0.7
USB1-201ENST00000219281 C14orf177Q52M58 125 aa10.69□□□□□ -0.7
USB1-201ENST00000219281 SPRR1BP22528 89 aa10.69□□□□□ -0.7
USB1-201ENST00000219281 KRTAP29-1A8MX34 341 aaPredicted RBP10.68□□□□□ -0.7
USB1-201ENST00000219281 H0Y9J4 135 aa10.68□□□□□ -0.7
USB1-201ENST00000219281 BRK1Q8WUW1 75 aa10.68□□□□□ -0.7
USB1-201ENST00000219281 STARD9Q9P2P6 4700 aa10.68□□□□□ -0.7
USB1-201ENST00000219281 MP68P56378 58 aa10.67□□□□□ -0.7
USB1-201ENST00000219281 CASC2Q6XLA1 102 aa10.65□□□□□ -0.7
USB1-201ENST00000219281 PRR15Q8IV56 129 aa10.65□□□□□ -0.7
USB1-201ENST00000219281 C9orf163Q8N9P6 203 aa10.64□□□□□ -0.71
USB1-201ENST00000219281 LINC00208Q96KT6 92 aa10.64□□□□□ -0.71
USB1-201ENST00000219281 LINC00472Q9H8W2 130 aa10.64□□□□□ -0.71
USB1-201ENST00000219281 VPS13DQ5THJ4 4388 aa10.64□□□□□ -0.71
USB1-201ENST00000219281 CYP4F30PQ9H0H9 118 aa10.64□□□□□ -0.71
USB1-201ENST00000219281 NDUFB1O75438 58 aa10.63□□□□□ -0.71
USB1-201ENST00000219281 TRAV22A0A0B4J277 110 aa10.63□□□□□ -0.71
USB1-201ENST00000219281 A8MWP4 228 aa10.62□□□□□ -0.71
USB1-201ENST00000219281 SRRM2Q9UQ35 2752 aaKnown RBP10.62□□□□□ -0.71
USB1-201ENST00000219281 PANO1I0J062 215 aa10.6□□□□□ -0.71
USB1-201ENST00000219281 MEGF8Q7Z7M0 2845 aa10.6□□□□□ -0.71
USB1-201ENST00000219281 NUPR2A6NF83 97 aa10.6□□□□□ -0.71
USB1-201ENST00000219281 H0Y9P7 68 aa10.6□□□□□ -0.71
USB1-201ENST00000219281 Q1T7F1 81 aa10.58□□□□□ -0.72
USB1-201ENST00000219281 NBDYA0A0U1RRE5 68 aa10.58□□□□□ -0.72
USB1-201ENST00000219281 KRTAP13-1Q8IUC0 172 aa10.55□□□□□ -0.72
USB1-201ENST00000219281 PKIGQ9Y2B9 76 aa10.55□□□□□ -0.72
USB1-201ENST00000219281 Q6ZRN7 208 aaPredicted RBP10.55□□□□□ -0.72
USB1-201ENST00000219281 H3BPC8 53 aa10.53□□□□□ -0.72
USB1-201ENST00000219281 KMT2AQ03164 3969 aa10.53□□□□□ -0.72
USB1-201ENST00000219281 IGLV9-49A0A0B4J1Y8 123 aa10.52□□□□□ -0.73
USB1-201ENST00000219281 MMP24-AS1A0A0U1RRL7 71 aa10.52□□□□□ -0.73
USB1-201ENST00000219281 PSPHP1O15172 72 aa10.51□□□□□ -0.73
USB1-201ENST00000219281 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.5□□□□□ -0.73
USB1-201ENST00000219281 SPANXA2-OT1Q8N9U9 137 aa10.49□□□□□ -0.73
USB1-201ENST00000219281 DNAH2Q9P225 4427 aa10.49□□□□□ -0.73
USB1-201ENST00000219281 SPACA4Q8TDM5 124 aa10.47□□□□□ -0.73
USB1-201ENST00000219281 Q96NJ1 140 aa10.47□□□□□ -0.73
USB1-201ENST00000219281 A8MUN3 132 aa10.41□□□□□ -0.74
USB1-201ENST00000219281 MOBPQ13875 183 aa10.41□□□□□ -0.74
USB1-201ENST00000219281 LINC00483Q53H64 154 aa10.41□□□□□ -0.74
USB1-201ENST00000219281 HECTD4Q9Y4D8 3996 aa10.41□□□□□ -0.74
USB1-201ENST00000219281 V9GYY9 64 aa10.4□□□□□ -0.75
USB1-201ENST00000219281 C8orf17Q9NRJ1 99 aa10.39□□□□□ -0.75
USB1-201ENST00000219281 ASB16-AS1Q495Z4 193 aa10.38□□□□□ -0.75
USB1-201ENST00000219281 FBN3Q75N90 2809 aa10.38□□□□□ -0.75
USB1-201ENST00000219281 C1orf195Q5TG92 126 aa10.38□□□□□ -0.75
USB1-201ENST00000219281 DNAH17Q9UFH2 4485 aa10.38□□□□□ -0.75
USB1-201ENST00000219281 A0A087WTM6 91 aa10.37□□□□□ -0.75
USB1-201ENST00000219281 Q6ZR54 194 aa10.37□□□□□ -0.75
USB1-201ENST00000219281 ANAPC11Q9NYG5 84 aa10.37□□□□□ -0.75
USB1-201ENST00000219281 IGHV6-1A0A0B4J1U7 121 aa10.36□□□□□ -0.75
USB1-201ENST00000219281 PCOTHQ58A44 107 aa10.36□□□□□ -0.75
USB1-201ENST00000219281 PSORS1C2Q9UIG4 136 aa10.36□□□□□ -0.75
USB1-201ENST00000219281 WWC2-AS2Q96NR7 200 aa10.36□□□□□ -0.75
USB1-201ENST00000219281 TP53AIP1Q9HCN2 124 aa10.36□□□□□ -0.75
USB1-201ENST00000219281 ZNF706Q9Y5V0 76 aaPredicted RBP10.36□□□□□ -0.75
USB1-201ENST00000219281 TGP01266 2768 aa10.35□□□□□ -0.75
USB1-201ENST00000219281 IGLV7-46A0A075B6I9 117 aa10.35□□□□□ -0.75
USB1-201ENST00000219281 Q8N9P0 234 aaPredicted RBP10.35□□□□□ -0.75
USB1-201ENST00000219281 IGLV5-52A0A0A0MRZ9 124 aa10.33□□□□□ -0.76
USB1-201ENST00000219281 A0A1B0GVX0 72 aa10.33□□□□□ -0.76
USB1-201ENST00000219281 NDUFS5O43920 106 aa10.33□□□□□ -0.76
USB1-201ENST00000219281 RTL8CO15255 209 aa10.33□□□□□ -0.76
USB1-201ENST00000219281 Q5VV11 94 aa10.33□□□□□ -0.76
USB1-201ENST00000219281 COA5Q86WW8 74 aa10.32□□□□□ -0.76
USB1-201ENST00000219281 CDK2AP2O75956 126 aa10.31□□□□□ -0.76
USB1-201ENST00000219281 CD164Q04900 197 aa10.31□□□□□ -0.76
USB1-201ENST00000219281 ZNF861PO60384 105 aa10.29□□□□□ -0.76
USB1-201ENST00000219281 LIMD2Q9BT23 127 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms