RNA–Protein interactions for RNA: ENST00000215917.11

SRRD-201, Transcript of SRR1 domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRD, Length 4,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRD-201ENST00000215917 TRAV22A0A0B4J277 110 aa9.77□□□□□ -0.85
SRRD-201ENST00000215917 K7EIL1 84 aa9.77□□□□□ -0.85
SRRD-201ENST00000215917 Q8N377 158 aa9.77□□□□□ -0.85
SRRD-201ENST00000215917 TENM2Q9NT68 2774 aa9.76□□□□□ -0.85
SRRD-201ENST00000215917 LINC00528Q8N1L1 170 aa9.76□□□□□ -0.85
SRRD-201ENST00000215917 C15orf56Q8N910 161 aa9.76□□□□□ -0.85
SRRD-201ENST00000215917 CHTF8P0CG12 524 aa9.75□□□□□ -0.85
SRRD-201ENST00000215917 ERC2-IT1O76042 136 aa9.74□□□□□ -0.85
SRRD-201ENST00000215917 SPINK1P00995 79 aa9.74□□□□□ -0.85
SRRD-201ENST00000215917 CASC10Q5T4H9 136 aa9.73□□□□□ -0.85
SRRD-201ENST00000215917 MDFIQ99750 246 aa9.73□□□□□ -0.85
SRRD-201ENST00000215917 Q6ZRX8 168 aa9.72□□□□□ -0.85
SRRD-201ENST00000215917 BCE1O60756 84 aa9.72□□□□□ -0.85
SRRD-201ENST00000215917 IGLV8-61A0A075B6I0 122 aa9.71□□□□□ -0.85
SRRD-201ENST00000215917 A0A1W2PNM2 257 aa9.71□□□□□ -0.85
SRRD-201ENST00000215917 COL7A1Q02388 2944 aa9.7□□□□□ -0.86
SRRD-201ENST00000215917 LINC01556Q5JQF7 62 aa9.69□□□□□ -0.86
SRRD-201ENST00000215917 H3BNG1 76 aa9.69□□□□□ -0.86
SRRD-201ENST00000215917 DNAH3Q8TD57 4116 aa9.68□□□□□ -0.86
SRRD-201ENST00000215917 GVQW2A0A096LPI5 108 aaPredicted RBP9.68□□□□□ -0.86
SRRD-201ENST00000215917 LINC00588Q9Y4M8 146 aa9.68□□□□□ -0.86
SRRD-201ENST00000215917 KRTAP26-1Q6PEX3 210 aa9.67□□□□□ -0.86
SRRD-201ENST00000215917 PHF5AQ7RTV0 110 aaKnown RBP9.67□□□□□ -0.86
SRRD-201ENST00000215917 CIRBP-AS1Q8TBR5 109 aa9.66□□□□□ -0.86
SRRD-201ENST00000215917 OCR1Q9BZK8 76 aa9.66□□□□□ -0.86
SRRD-201ENST00000215917 hDV103S1A0JD37 113 aa9.66□□□□□ -0.86
SRRD-201ENST00000215917 EPM2AB3EWF7 344 aa9.65□□□□□ -0.86
SRRD-201ENST00000215917 HUWE1Q7Z6Z7 4374 aaKnown RBP9.64□□□□□ -0.87
SRRD-201ENST00000215917 LIMD2Q9BT23 127 aa9.62□□□□□ -0.87
SRRD-201ENST00000215917 LYSTQ99698 3801 aa9.62□□□□□ -0.87
SRRD-201ENST00000215917 IGFL1Q6UW32 110 aa9.61□□□□□ -0.87
SRRD-201ENST00000215917 COA5Q86WW8 74 aa9.59□□□□□ -0.87
SRRD-201ENST00000215917 DNAH10OSP0CZ25 163 aa9.59□□□□□ -0.87
SRRD-201ENST00000215917 ANAPC11Q9NYG5 84 aa9.58□□□□□ -0.88
SRRD-201ENST00000215917 CSMD3Q7Z407 3707 aa9.56□□□□□ -0.88
SRRD-201ENST00000215917 F8WDY8 70 aa9.56□□□□□ -0.88
SRRD-201ENST00000215917 KCNQ1DNQ9H478 68 aa9.56□□□□□ -0.88
SRRD-201ENST00000215917 FLG2Q5D862 2391 aaPredicted RBP9.56□□□□□ -0.88
SRRD-201ENST00000215917 DSCR10P59022 87 aa9.55□□□□□ -0.88
SRRD-201ENST00000215917 MOBPQ13875 183 aa9.55□□□□□ -0.88
SRRD-201ENST00000215917 IGLV1-50A0A075B6I6 118 aa9.54□□□□□ -0.88
SRRD-201ENST00000215917 IGKV2D-30A0A075B6S6 120 aa9.53□□□□□ -0.88
SRRD-201ENST00000215917 IGKV2-30P06310 120 aa9.53□□□□□ -0.88
SRRD-201ENST00000215917 A8MU10 97 aa9.53□□□□□ -0.88
SRRD-201ENST00000215917 PRR26Q8N8Z3 221 aa9.49□□□□□ -0.89
SRRD-201ENST00000215917 SRRM2Q9UQ35 2752 aaKnown RBP9.49□□□□□ -0.89
SRRD-201ENST00000215917 C4orf48Q5BLP8 95 aa9.48□□□□□ -0.89
SRRD-201ENST00000215917 KRTAP1-5Q9BYS1 174 aa9.48□□□□□ -0.89
SRRD-201ENST00000215917 C14orf177Q52M58 125 aa9.48□□□□□ -0.89
SRRD-201ENST00000215917 PRR15Q8IV56 129 aa9.48□□□□□ -0.89
SRRD-201ENST00000215917 DNAH10Q8IVF4 4471 aa9.47□□□□□ -0.89
SRRD-201ENST00000215917 DNAH9Q9NYC9 4486 aa9.46□□□□□ -0.89
SRRD-201ENST00000215917 ATP11AUNQ6ZP68 121 aa9.45□□□□□ -0.9
SRRD-201ENST00000215917 A0A1B0GU69 56 aa9.44□□□□□ -0.9
SRRD-201ENST00000215917 LOC101927531A0A1B0GV80 90 aa9.43□□□□□ -0.9
SRRD-201ENST00000215917 IGLV5-48A0A075B6I7 105 aa9.43□□□□□ -0.9
SRRD-201ENST00000215917 A8MWP4 228 aa9.43□□□□□ -0.9
SRRD-201ENST00000215917 PRAC1Q96KF2 57 aa9.43□□□□□ -0.9
SRRD-201ENST00000215917 CD164Q04900 197 aa9.42□□□□□ -0.9
SRRD-201ENST00000215917 KRTAP7-1Q8IUC3 87 aa9.42□□□□□ -0.9
SRRD-201ENST00000215917 DNHD1Q96M86 4753 aa9.41□□□□□ -0.9
SRRD-201ENST00000215917 DNAH7Q8WXX0 4024 aa9.41□□□□□ -0.9
SRRD-201ENST00000215917 MEGF8Q7Z7M0 2845 aa9.4□□□□□ -0.9
SRRD-201ENST00000215917 KTN1-AS1Q86SY8 53 aa9.39□□□□□ -0.91
SRRD-201ENST00000215917 RBM12B-AS1Q9P1G2 102 aa9.39□□□□□ -0.91
SRRD-201ENST00000215917 APLNQ9ULZ1 77 aa9.39□□□□□ -0.91
SRRD-201ENST00000215917 TLX1NBP0CAT3 122 aa9.38□□□□□ -0.91
SRRD-201ENST00000215917 C16orf90A8MZG2 172 aa9.37□□□□□ -0.91
SRRD-201ENST00000215917 Q1T7F1 81 aa9.37□□□□□ -0.91
SRRD-201ENST00000215917 TGP01266 2768 aa9.37□□□□□ -0.91
SRRD-201ENST00000215917 PLECQ15149 4684 aaKnown RBP9.36□□□□□ -0.91
SRRD-201ENST00000215917 PRKDCP78527 4128 aaKnown RBP9.36□□□□□ -0.91
SRRD-201ENST00000215917 Q8N9P0 234 aaPredicted RBP9.35□□□□□ -0.91
SRRD-201ENST00000215917 Q5VV11 94 aa9.35□□□□□ -0.91
SRRD-201ENST00000215917 SPACA4Q8TDM5 124 aa9.35□□□□□ -0.91
SRRD-201ENST00000215917 LY6G6CO95867 125 aa9.34□□□□□ -0.92
SRRD-201ENST00000215917 DNAH1Q9P2D7 4330 aa9.33□□□□□ -0.92
SRRD-201ENST00000215917 A0A1B0GW54 56 aa9.32□□□□□ -0.92
SRRD-201ENST00000215917 KRTAP4-16G5E9R7 235 aaPredicted RBP9.31□□□□□ -0.92
SRRD-201ENST00000215917 PLA2G2DQ9UNK4 145 aa9.31□□□□□ -0.92
SRRD-201ENST00000215917 C8orf17Q9NRJ1 99 aa9.3□□□□□ -0.92
SRRD-201ENST00000215917 ACYP2P14621 99 aa9.3□□□□□ -0.92
SRRD-201ENST00000215917 ZNF706Q9Y5V0 76 aaPredicted RBP9.3□□□□□ -0.92
SRRD-201ENST00000215917 C7orf65Q6ZTY9 151 aa9.29□□□□□ -0.92
SRRD-201ENST00000215917 CYP4F30PQ9H0H9 118 aa9.29□□□□□ -0.92
SRRD-201ENST00000215917 TP53AIP1Q9HCN2 124 aa9.29□□□□□ -0.92
SRRD-201ENST00000215917 STARD9Q9P2P6 4700 aa9.29□□□□□ -0.92
SRRD-201ENST00000215917 SPRR1AP35321 89 aa9.28□□□□□ -0.92
SRRD-201ENST00000215917 MRPL34Q9BQ48 92 aaKnown RBP9.28□□□□□ -0.92
SRRD-201ENST00000215917 SPINK7P58062 85 aa9.28□□□□□ -0.92
SRRD-201ENST00000215917 IGLV5-37A0A075B6J1 123 aa9.27□□□□□ -0.93
SRRD-201ENST00000215917 CNBPP62633 177 aaKnown RBP9.27□□□□□ -0.93
SRRD-201ENST00000215917 H3BPC8 53 aa9.27□□□□□ -0.93
SRRD-201ENST00000215917 NUPR2A6NF83 97 aa9.27□□□□□ -0.93
SRRD-201ENST00000215917 NBDYA0A0U1RRE5 68 aa9.26□□□□□ -0.93
SRRD-201ENST00000215917 KRTAP11-1Q8IUC1 163 aa9.26□□□□□ -0.93
SRRD-201ENST00000215917 SPRR4Q96PI1 79 aa9.26□□□□□ -0.93
SRRD-201ENST00000215917 RTL8CO15255 209 aa9.26□□□□□ -0.93
SRRD-201ENST00000215917 C8orf87E5RJ46 101 aa9.25□□□□□ -0.93
SRRD-201ENST00000215917 IGLV5-52A0A0A0MRZ9 124 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms